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Os10g0119100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Non-protein coding transcript, unclassifiable transcript.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.21 (0.0318) R2 : 0.504
β1 : 0.945 (0.116) R2dD : 0.0745 R2D : 0.0559
β2 : 1.66 (0.083) R2dC : 0.439 R2C : 0.423
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.245 (0.0678) R2dN8 : 0.019 R2N8 : -0.00368
σ : 0.597
deviance : 162.75
__
_____
C
peak time of C : 18.1
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
149.1 0.574 7.28 0.505 1.65 1.44 -0.976 5.33 0.208 17.9 0.5798 1475 -- --
159.16 0.588 7.18 1.02 1.89 0.657 -1.22 -- 0.338 17.5 4.116 1808 -- --
151.4 0.573 7.28 0.522 1.64 1.43 -- 5.3 0.207 17.9 0.53 1479 -- --
161.16 0.591 7.2 1.01 1.91 0.597 -- -- 0.306 17.6 3.435 1837 -- --
290.27 0.794 7.27 0.376 -- 1.75 -- 6.38 0.154 -- 0.47 1462 -- --
160.93 0.595 7.21 0.937 1.67 -- -0.865 -- 0.248 18.1 -- -- -- --
162.75 0.597 7.21 0.945 1.66 -- -- -- 0.245 18.1 -- -- -- --
301.55 0.809 7.15 0.972 -- 0.475 -- -- 0.329 -- 6.881 1455 -- --
184.96 0.633 7.21 -- 1.8 0.364 -- -- 0.216 18 10 1954 -- --
305.85 0.817 7.18 0.898 -- -- -- -- 0.208 -- -- -- -- --
186.27 0.638 7.23 -- 1.65 -- -- -- 0.14 18.1 -- -- -- --
320.46 0.834 7.17 -- -- 0.502 -- -- 0.262 -- 10 10093 -- --
327.1 0.844 7.2 -- -- -- -- -- 0.108 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 134.40 temperature 15.0 270 > th dose independent rect. 19 7
3 135.46 temperature 15.0 270 > th dose independent rect. 9 16
5 136.00 temperature 15.0 10 > th dose independent rect. 21 8
13 137.77 temperature 15.0 270 > th dose independent rect. 20 18
16 138.12 temperature 15.0 270 > th dose independent rect. 21 16
22 138.82 temperature 15.0 270 > th dose independent rect. 19 20
23 138.94 wind 1.0 270 < th dose independent rect. 4 1
35 139.73 wind 1.0 270 < th dose dependent rect. 4 1
38 140.01 temperature 15.0 10 > th dose independent rect. 23 5
46 140.60 atmosphere 1015.0 270 < th dose dependent rect. 21 4
50 140.70 atmosphere 1015.0 10 < th dose dependent rect. 21 7
54 140.83 radiation 10.0 43200 > th dose independent rect. 10 1
60 141.23 humidity 50.0 10 > th dose independent rect. 5 16
64 141.31 atmosphere 1010.0 10 < th dose independent rect. 21 8
66 141.33 wind 3.0 90 < th dose dependent rect. 4 5
68 141.37 temperature 10.0 270 > th dose dependent rect. 1 8
70 141.45 temperature 15.0 270 > th dose independent rect. 23 1
78 141.72 wind 3.0 90 < th dose dependent rect. 3 7
80 141.76 wind 1.0 90 < th dose independent rect. 4 6
91 141.92 precipitation 0.1 270 < th dose independent rect. 20 6
92 141.92 precipitation 0.1 270 < th dose dependent rect. 20 6
93 141.93 wind 1.0 30 > th dose independent rect. 21 8
94 141.93 humidity 50.0 270 > th dose independent rect. 2 17
97 141.98 wind 9.0 270 < th dose dependent rect. 1 8
101 142.03 temperature 30.0 270 < th dose independent rect. 20 6
102 142.03 humidity 50.0 270 > th dose independent rect. 20 6
105 142.03 atmosphere 995.0 270 > th dose independent rect. 20 6
106 142.03 radiation 1.0 270 < th dose independent rect. 20 6
111 142.03 temperature 10.0 270 > th dose independent rect. 2 18
112 142.03 atmosphere 1015.0 270 < th dose independent rect. 2 18
113 142.03 radiation 1.0 270 < th dose dependent rect. 20 6
121 142.07 wind 9.0 270 < th dose independent rect. 2 18
125 142.09 radiation 1.0 10 < th dose dependent rect. 21 8
129 142.16 wind 9.0 270 < th dose independent rect. 20 6
137 142.24 temperature 30.0 10 < th dose independent rect. 21 8
138 142.24 humidity 50.0 10 > th dose independent rect. 21 8
141 142.24 atmosphere 995.0 10 > th dose independent rect. 21 8
142 142.24 radiation 1.0 10 < th dose independent rect. 21 8
147 142.24 temperature 10.0 10 > th dose independent rect. 5 16
149 142.24 atmosphere 1015.0 10 < th dose independent rect. 5 16
162 142.25 temperature 10.0 90 > th dose independent rect. 4 17
163 142.25 atmosphere 1015.0 90 < th dose independent rect. 4 17
171 142.27 wind 9.0 10 < th dose independent rect. 21 8
173 142.28 humidity 70.0 43200 > th dose dependent rect. 8 20
174 142.29 atmosphere 1015.0 10 < th dose dependent rect. 23 5
180 142.35 humidity 80.0 43200 > th dose independent rect. 3 12
186 142.39 humidity 70.0 43200 > th dose dependent rect. 1 14
187 142.40 atmosphere 1015.0 1440 < th dose independent rect. 24 3
194 142.46 humidity 50.0 270 > th dose dependent rect. 1 8
201 142.49 temperature 15.0 10 > th dose independent rect. 12 16
222 142.52 humidity 70.0 43200 > th dose dependent rect. 23 20
240 142.54 wind 9.0 10 < th dose independent rect. 5 16
244 142.56 wind 9.0 90 < th dose independent rect. 4 17
248 142.58 precipitation 0.1 270 < th dose independent rect. 2 18
250 142.58 precipitation 0.1 270 < th dose dependent rect. 2 18
253 142.60 radiation 1.0 10 < th dose dependent rect. 21 17
263 142.66 precipitation 0.1 10 < th dose independent rect. 5 16
265 142.66 precipitation 0.1 10 < th dose dependent rect. 5 16
306 142.75 humidity 80.0 43200 > th dose dependent rect. 20 4
309 142.75 radiation 1.0 10 < th dose dependent rect. 21 15
322 142.84 humidity 90.0 90 > th dose dependent rect. 4 1
327 142.88 humidity 70.0 43200 > th dose dependent sin 4 NA
332 142.91 temperature 15.0 10 > th dose independent rect. 8 21
333 142.92 humidity 50.0 1440 < th dose independent rect. 16 1
335 142.92 radiation 1.0 10 < th dose dependent rect. 21 11
339 142.93 wind 7.0 270 < th dose independent rect. 15 15
346 142.94 humidity 80.0 43200 > th dose independent rect. 4 10
348 142.95 humidity 50.0 1440 < th dose dependent rect. 16 1
363 143.06 wind 9.0 90 < th dose dependent rect. 4 17
365 143.07 humidity 80.0 43200 < th dose independent rect. 2 14
389 143.17 atmosphere 1010.0 10 < th dose independent rect. 23 5
400 143.20 atmosphere 1015.0 270 < th dose dependent rect. 23 1
409 143.24 precipitation 0.1 270 < th dose independent rect. 9 16
411 143.24 humidity 80.0 43200 > th dose dependent rect. 15 14
412 143.24 precipitation 0.1 270 < th dose dependent rect. 9 16
421 143.28 humidity 80.0 43200 < th dose independent rect. 3 12
428 143.29 humidity 80.0 43200 > th dose dependent rect. 17 11
469 143.33 temperature 30.0 1440 > th dose dependent rect. 18 1
489 143.35 humidity 50.0 10 > th dose independent rect. 4 19
493 143.36 wind 9.0 270 < th dose dependent rect. 2 18
502 143.39 humidity 70.0 43200 > th dose dependent no NA NA
511 143.44 atmosphere 995.0 270 > th dose independent rect. 2 18
526 143.45 humidity 60.0 270 > th dose independent rect. 1 8
533 143.45 humidity 80.0 43200 > th dose dependent rect. 18 9
537 143.46 wind 1.0 90 < th dose dependent rect. 4 14
543 143.48 temperature 15.0 10 > th dose independent rect. 23 16
548 143.49 humidity 80.0 43200 > th dose dependent sin 13 NA
552 143.49 humidity 50.0 30 > th dose dependent rect. 4 17
555 143.51 wind 1.0 270 > th dose independent rect. 6 9
560 143.52 humidity 80.0 43200 > th dose independent sin 3 NA
569 143.54 precipitation 0.1 270 < th dose independent rect. 1 8
573 143.54 precipitation 0.1 270 < th dose dependent rect. 1 8
586 143.59 wind 7.0 270 < th dose independent rect. 1 8
590 143.60 humidity 70.0 43200 > th dose dependent rect. 17 23
595 143.63 atmosphere 995.0 10 > th dose independent rect. 5 16
600 143.66 wind 1.0 30 > th dose independent rect. 23 6
607 143.68 humidity 50.0 1440 > th dose independent rect. 16 1
610 143.68 humidity 50.0 10 > th dose dependent rect. 4 8
624 143.73 humidity 80.0 43200 < th dose independent rect. 1 16
629 143.75 precipitation 0.1 270 < th dose independent rect. 6 9
632 143.75 precipitation 0.1 270 < th dose dependent rect. 6 9
636 143.76 atmosphere 1010.0 270 < th dose independent rect. 1 8
637 143.77 humidity 90.0 43200 < th dose independent rect. 2 1
638 143.77 atmosphere 1010.0 270 < th dose independent rect. 21 4
639 143.77 humidity 90.0 43200 < th dose independent rect. 21 8
642 143.78 temperature 10.0 270 > th dose independent rect. 6 9
643 143.78 atmosphere 1015.0 270 < th dose independent rect. 6 9
645 143.78 temperature 10.0 270 > th dose independent rect. 15 15
653 143.80 wind 9.0 270 < th dose independent rect. 6 9
654 143.80 atmosphere 995.0 270 > th dose independent rect. 6 9
660 143.84 temperature 10.0 270 > th dose dependent rect. 20 6
664 143.85 temperature 15.0 10 > th dose independent rect. 12 14
678 143.91 radiation 40.0 270 < th dose independent rect. 15 15
691 143.94 temperature 10.0 270 > th dose independent rect. 1 8
694 143.94 atmosphere 995.0 270 > th dose independent rect. 1 8
704 143.96 humidity 70.0 43200 > th dose dependent sin 17 NA
729 144.03 temperature 15.0 1440 > th dose independent rect. 18 4
733 144.04 radiation 1.0 10 < th dose independent rect. 21 17
740 144.05 wind 3.0 270 < th dose independent rect. 2 6
762 144.12 humidity 80.0 43200 > th dose dependent rect. 20 15
786 144.19 radiation 30.0 43200 < th dose independent rect. 17 7
808 144.20 radiation 1.0 10 < th dose independent rect. 21 15
818 144.24 temperature 30.0 270 < th dose independent rect. 21 16
819 144.24 temperature 30.0 43200 > th dose dependent rect. 18 1
861 144.33 radiation 1.0 43200 < th dose independent rect. 10 2
864 144.33 radiation 1.0 43200 < th dose dependent rect. 10 2
878 144.36 radiation 10.0 43200 < th dose independent rect. 18 13
884 144.37 radiation 30.0 43200 < th dose independent rect. 17 5
902 144.40 wind 9.0 270 < th dose independent rect. 9 16
906 144.42 humidity 80.0 43200 < th dose independent sin 3 NA
918 144.44 humidity 90.0 43200 < th dose independent rect. 24 8
935 144.47 temperature 15.0 1440 > th dose independent rect. 16 8
936 144.47 humidity 80.0 270 > th dose dependent rect. 2 4
940 144.48 radiation 40.0 270 < th dose independent rect. 1 8
971 144.55 temperature 10.0 270 > th dose dependent rect. 21 4
976 144.56 atmosphere 1015.0 30 < th dose dependent rect. 4 17
985 144.58 humidity 80.0 43200 > th dose independent rect. 24 20
989 144.59 radiation 10.0 43200 < th dose independent rect. 4 3
997 144.60 temperature 15.0 1440 > th dose independent rect. 18 6