Os10g0114400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein kinase-like domain containing protein.
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Os10g0114400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein kinase-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 157.47 | 0.59 | 3.87 | 1.91 | 0.14 | 0.653 | -0.00143 | 1.43 | 0.558 | 9.87 | 1002 | 12679 | -- | -- |
| 158.93 | 0.587 | 3.85 | 2 | 0.142 | 0.905 | -0.0194 | -- | 0.554 | 9.83 | 1001 | 12213 | -- | -- |
| 157.47 | 0.584 | 3.87 | 1.91 | 0.14 | 0.653 | -- | 1.43 | 0.558 | 9.87 | 1002 | 12679 | -- | -- |
| 158.93 | 0.587 | 3.85 | 2 | 0.142 | 0.914 | -- | -- | 0.558 | 9.91 | 1001 | 11944 | -- | -- |
| 158.64 | 0.587 | 3.88 | 1.91 | -- | 0.639 | -- | 1.49 | 0.559 | -- | 1002 | 12667 | -- | -- |
| 178.56 | 0.626 | 3.83 | 1.81 | 0.139 | -- | 0.00644 | -- | 0.659 | 9.44 | -- | -- | -- | -- |
| 178.57 | 0.626 | 3.83 | 1.81 | 0.139 | -- | -- | -- | 0.659 | 9.42 | -- | -- | -- | -- |
| 160.13 | 0.589 | 3.86 | 1.99 | -- | 0.903 | -- | -- | 0.555 | -- | 1001 | 12213 | -- | -- |
| 258.4 | 0.749 | 3.87 | -- | 0.149 | 0.492 | -- | -- | 0.474 | 9.25 | 1003 | 12440 | -- | -- |
| 179.7 | 0.626 | 3.83 | 1.81 | -- | -- | -- | -- | 0.659 | -- | -- | -- | -- | -- |
| 265.36 | 0.762 | 3.88 | -- | 0.142 | -- | -- | -- | 0.456 | 8.45 | -- | -- | -- | -- |
| 258.56 | 0.749 | 3.9 | -- | -- | 0.598 | -- | -- | 0.373 | -- | 1003 | 13880 | -- | -- |
| 266.49 | 0.762 | 3.88 | -- | -- | -- | -- | -- | 0.458 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 149.55 | temperature | 30 | 14400 | < th | dose independent | rect. | 11 | 2 |
| 3 | 149.86 | temperature | 30 | 14400 | > th | dose independent | rect. | 11 | 2 |
| 4 | 149.96 | temperature | 25 | 14400 | > th | dose dependent | rect. | 23 | 2 |
| 10 | 150.94 | wind | 7 | 43200 | < th | dose independent | rect. | 13 | 19 |
| 12 | 151.04 | wind | 7 | 43200 | > th | dose independent | rect. | 14 | 18 |
| 25 | 151.27 | temperature | 25 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 38 | 151.63 | wind | 5 | 43200 | > th | dose dependent | rect. | 13 | 17 |
| 40 | 151.68 | wind | 5 | 43200 | > th | dose dependent | rect. | 14 | 1 |
| 53 | 151.86 | temperature | 25 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 58 | 151.94 | wind | 7 | 43200 | < th | dose independent | rect. | 13 | 12 |
| 62 | 151.98 | wind | 7 | 43200 | < th | dose independent | rect. | 14 | 2 |
| 72 | 152.05 | temperature | 25 | 14400 | < th | dose independent | rect. | 2 | 2 |
| 76 | 152.10 | wind | 7 | 43200 | > th | dose independent | rect. | 14 | 11 |
| 77 | 152.10 | wind | 5 | 43200 | > th | dose dependent | rect. | 13 | 11 |
| 90 | 152.22 | wind | 7 | 43200 | > th | dose independent | rect. | 14 | 2 |
| 97 | 152.29 | temperature | 25 | 14400 | < th | dose independent | rect. | 24 | 4 |
| 151 | 152.75 | temperature | 30 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 153 | 152.76 | temperature | 25 | 14400 | > th | dose independent | rect. | 23 | 5 |
| 161 | 152.81 | temperature | 30 | 14400 | < th | dose independent | rect. | 17 | 21 |
| 173 | 152.88 | temperature | 30 | 14400 | < th | dose independent | rect. | 3 | 11 |
| 175 | 152.88 | temperature | 30 | 14400 | < th | dose independent | rect. | 21 | 17 |
| 207 | 152.96 | temperature | 30 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 208 | 152.96 | temperature | 30 | 14400 | > th | dose dependent | rect. | 14 | 3 |
| 221 | 152.99 | temperature | 30 | 14400 | > th | dose independent | rect. | 17 | 21 |
| 233 | 153.01 | temperature | 25 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 242 | 153.04 | wind | 7 | 43200 | < th | dose independent | sin | 17 | NA |
| 282 | 153.13 | wind | 5 | 43200 | > th | dose dependent | sin | 17 | NA |
| 298 | 153.24 | wind | 7 | 43200 | > th | dose independent | sin | 17 | NA |
| 332 | 153.30 | temperature | 30 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 497 | 153.70 | wind | 7 | 43200 | < th | dose independent | rect. | 2 | 17 |
| 505 | 153.72 | wind | 7 | 43200 | < th | dose independent | rect. | 22 | 21 |
| 527 | 153.76 | wind | 7 | 43200 | > th | dose independent | rect. | 2 | 17 |
| 529 | 153.76 | wind | 7 | 43200 | > th | dose independent | rect. | 22 | 21 |
| 535 | 153.77 | temperature | 30 | 14400 | > th | dose dependent | sin | 14 | NA |
| 595 | 153.88 | temperature | 30 | 14400 | < th | dose independent | rect. | 16 | 8 |
| 596 | 153.88 | temperature | 30 | 14400 | < th | dose independent | rect. | 16 | 12 |
| 603 | 153.89 | temperature | 30 | 14400 | < th | dose independent | rect. | 16 | 6 |
| 666 | 153.96 | temperature | 30 | 14400 | > th | dose independent | rect. | 11 | 7 |
| 678 | 153.99 | temperature | 30 | 14400 | < th | dose independent | sin | 5 | NA |
| 714 | 154.03 | wind | 7 | 43200 | > th | dose independent | rect. | 6 | 13 |
| 718 | 154.04 | temperature | 30 | 14400 | > th | dose independent | sin | 3 | NA |
| 852 | 154.22 | temperature | 30 | 14400 | < th | dose independent | rect. | 10 | 8 |
| 870 | 154.24 | temperature | 30 | 14400 | < th | dose independent | rect. | 10 | 12 |
| 881 | 154.24 | temperature | 30 | 14400 | < th | dose independent | rect. | 10 | 18 |
| 955 | 154.29 | temperature | 30 | 14400 | > th | dose independent | no | NA | NA |