Os10g0113000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Chalcone reductase homologue (Fragment).
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Os10g0113000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Chalcone reductase homologue (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 138.21 | 0.552 | 9.47 | 1.6 | 0.893 | -2.24 | 0.628 | 6.43 | 0.185 | 3.4 | 20.82 | 4529 | -- | -- |
| 169.72 | 0.607 | 9.6 | 0.811 | 1.29 | -2.96 | 0.261 | -- | 0.236 | 3.24 | 8.392 | 9689 | -- | -- |
| 139.44 | 0.55 | 9.47 | 1.59 | 0.895 | -2.24 | -- | 6.47 | 0.184 | 3.38 | 20.84 | 4515 | -- | -- |
| 160.49 | 0.59 | 9.64 | 0.307 | 0.93 | -2.71 | -- | -- | 0.0778 | 3.47 | 8.43 | 8706 | -- | -- |
| 174.1 | 0.618 | 9.67 | -0.094 | -- | -2.57 | -- | 3.32 | -0.164 | -- | 20.84 | 4515 | -- | -- |
| 278.82 | 0.783 | 9.82 | -1.13 | 0.842 | -- | 0.591 | -- | -0.726 | 3.58 | -- | -- | -- | -- |
| 279.89 | 0.783 | 9.82 | -1.14 | 0.845 | -- | -- | -- | -0.729 | 3.55 | -- | -- | -- | -- |
| 177.77 | 0.624 | 9.73 | -0.536 | -- | -3.14 | -- | -- | -0.289 | -- | 13.67 | 6184 | -- | -- |
| 160.05 | 0.589 | 9.67 | -- | 0.918 | -2.56 | -- | -- | -0.0607 | 3.46 | 9.104 | 7331 | -- | -- |
| 319.72 | 0.836 | 9.82 | -1.11 | -- | -- | -- | -- | -0.707 | -- | -- | -- | -- | -- |
| 314.24 | 0.829 | 9.79 | -- | 0.822 | -- | -- | -- | -0.602 | 3.56 | -- | -- | -- | -- |
| 184.9 | 0.635 | 9.71 | -- | -- | -3.3 | -- | -- | -0.211 | -- | 13.67 | 6184 | -- | -- |
| 352 | 0.876 | 9.8 | -- | -- | -- | -- | -- | -0.584 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 133.29 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 22 | 135.79 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 15 |
| 29 | 136.88 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 8 |
| 31 | 136.92 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 2 |
| 40 | 137.05 | temperature | 20 | 4320 | > th | dose dependent | rect. | 17 | 4 |
| 51 | 137.69 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 3 |
| 55 | 137.85 | temperature | 20 | 1440 | > th | dose dependent | sin | 11 | NA |
| 57 | 137.89 | temperature | 25 | 4320 | < th | dose independent | rect. | 10 | 11 |
| 60 | 137.91 | temperature | 20 | 1440 | > th | dose dependent | rect. | 4 | 5 |
| 64 | 137.97 | temperature | 25 | 4320 | < th | dose independent | rect. | 6 | 15 |
| 66 | 137.97 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 8 |
| 68 | 137.98 | temperature | 20 | 4320 | > th | dose dependent | rect. | 15 | 8 |
| 75 | 138.07 | temperature | 25 | 4320 | < th | dose independent | sin | 22 | NA |
| 79 | 138.13 | temperature | 25 | 4320 | > th | dose independent | rect. | 6 | 14 |
| 80 | 138.16 | temperature | 25 | 4320 | > th | dose independent | rect. | 10 | 11 |
| 81 | 138.18 | temperature | 25 | 4320 | > th | dose independent | sin | 23 | NA |
| 116 | 138.48 | temperature | 20 | 4320 | > th | dose dependent | sin | 17 | NA |
| 122 | 138.51 | temperature | 25 | 4320 | > th | dose independent | rect. | 11 | 1 |
| 181 | 138.93 | radiation | 1 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 192 | 138.97 | temperature | 20 | 4320 | > th | dose dependent | rect. | 8 | 19 |
| 202 | 139.01 | temperature | 25 | 4320 | > th | dose independent | rect. | 6 | 10 |
| 207 | 139.01 | temperature | 20 | 4320 | > th | dose dependent | rect. | 7 | 17 |
| 263 | 139.17 | temperature | 20 | 1440 | > th | dose dependent | rect. | 7 | 1 |
| 274 | 139.22 | temperature | 20 | 4320 | > th | dose dependent | rect. | 2 | 21 |
| 304 | 139.35 | temperature | 25 | 4320 | > th | dose independent | rect. | 10 | 3 |
| 342 | 139.45 | temperature | 20 | 4320 | > th | dose dependent | rect. | 11 | 23 |
| 348 | 139.46 | temperature | 20 | 4320 | > th | dose dependent | rect. | 13 | 23 |
| 361 | 139.49 | temperature | 20 | 4320 | > th | dose dependent | no | NA | NA |
| 362 | 139.49 | temperature | 20 | 4320 | > th | dose dependent | rect. | 17 | 23 |
| 403 | 139.69 | temperature | 20 | 4320 | > th | dose dependent | rect. | 20 | 23 |
| 405 | 139.71 | temperature | 25 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 504 | 140.20 | temperature | 25 | 4320 | < th | dose independent | rect. | 13 | 7 |
| 549 | 140.42 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 11 |
| 705 | 141.57 | temperature | 20 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 781 | 142.16 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 2 |
| 983 | 143.44 | temperature | 25 | 4320 | < th | dose independent | rect. | 10 | 22 |
| 998 | 143.51 | temperature | 20 | 14400 | < th | dose independent | rect. | 21 | 2 |