Os10g0111800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0111800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 41.28 | 0.302 | 12.5 | -0.608 | 1.44 | 0.768 | -1.69 | -0.195 | 0.0761 | 13 | 10.01 | 191 | -- | -- |
| 41.14 | 0.299 | 12.5 | -0.625 | 1.45 | 0.77 | -1.8 | -- | 0.0744 | 13.1 | 10.01 | 176 | -- | -- |
| 45 | 0.312 | 12.5 | -0.448 | 1.07 | 0.989 | -- | -1.34 | 0.137 | 13.2 | 5.28 | 173 | -- | -- |
| 55.03 | 0.345 | 12.5 | -0.546 | 1.27 | 0.856 | -- | -- | 0.102 | 13.1 | 7.934 | 185 | -- | -- |
| 59.3 | 0.359 | 12.6 | -0.551 | -- | 1.76 | -- | -1.51 | 0.0405 | -- | 3.986 | 177 | -- | -- |
| 53.29 | 0.342 | 12.5 | -0.493 | 2.18 | -- | -1.67 | -- | 0.141 | 13.2 | -- | -- | -- | -- |
| 64.75 | 0.377 | 12.5 | -0.551 | 2.18 | -- | -- | -- | 0.132 | 13.3 | -- | -- | -- | -- |
| 71.92 | 0.395 | 12.5 | -0.569 | -- | 1.78 | -- | -- | 0.0977 | -- | 5.12 | 196 | -- | -- |
| 62.1 | 0.367 | 12.5 | -- | 1.3 | 0.831 | -- | -- | 0.154 | 13.1 | 8.35 | 181 | -- | -- |
| 358.4 | 0.885 | 12.6 | -0.636 | -- | -- | -- | -- | 0.0871 | -- | -- | -- | -- | -- |
| 72.75 | 0.399 | 12.5 | -- | 2.19 | -- | -- | -- | 0.193 | 13.3 | -- | -- | -- | -- |
| 80.42 | 0.418 | 12.5 | -- | -- | 1.8 | -- | -- | 0.153 | -- | 5.278 | 195 | -- | -- |
| 369.07 | 0.897 | 12.5 | -- | -- | -- | -- | -- | 0.158 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 32.97 | radiation | 1.0 | 270 | > th | dose independent | rect. | 7 | 9 |
| 2 | 33.98 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 7 | 8 |
| 6 | 34.90 | radiation | 1.0 | 90 | > th | dose independent | sin | 22 | NA |
| 8 | 35.20 | radiation | 1.0 | 90 | < th | dose independent | sin | 22 | NA |
| 9 | 35.37 | radiation | 1.0 | 270 | < th | dose independent | rect. | 4 | 15 |
| 11 | 35.45 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 15 | 17 |
| 16 | 35.83 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 4 | 15 |
| 17 | 35.88 | radiation | 1.0 | 90 | < th | dose dependent | sin | 22 | NA |
| 18 | 35.96 | radiation | 1.0 | 90 | < th | dose independent | rect. | 10 | 11 |
| 19 | 35.97 | radiation | 1.0 | 90 | < th | dose independent | rect. | 13 | 8 |
| 27 | 36.04 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 3 | 17 |
| 31 | 36.12 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 17 |
| 32 | 36.12 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 14 | 6 |
| 39 | 36.29 | temperature | 15.0 | 270 | > th | dose independent | rect. | 7 | 9 |
| 45 | 36.45 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 13 | 8 |
| 46 | 36.45 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 10 | 11 |
| 50 | 36.49 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 15 | 4 |
| 52 | 36.49 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 20 | 19 |
| 62 | 36.57 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 15 | 5 |
| 66 | 36.60 | radiation | 30.0 | 270 | < th | dose independent | rect. | 15 | 5 |
| 70 | 36.61 | radiation | 20.0 | 270 | < th | dose independent | rect. | 15 | 17 |
| 93 | 36.82 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 9 |
| 96 | 36.82 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 9 |
| 116 | 36.96 | wind | 9.0 | 270 | < th | dose independent | rect. | 16 | 15 |
| 125 | 37.02 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 9 |
| 126 | 37.02 | temperature | 10.0 | 270 | > th | dose independent | rect. | 16 | 15 |
| 149 | 37.22 | humidity | 50.0 | 270 | > th | dose independent | rect. | 20 | 19 |
| 168 | 37.41 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 9 |
| 172 | 37.43 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 20 | 19 |
| 174 | 37.43 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 20 | 19 |
| 175 | 37.44 | wind | 9.0 | 270 | < th | dose independent | rect. | 15 | 5 |
| 179 | 37.47 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 16 | 15 |
| 185 | 37.50 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 13 | 9 |
| 191 | 37.55 | temperature | 15.0 | 270 | > th | dose independent | rect. | 15 | 5 |
| 202 | 37.59 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 15 | 5 |
| 203 | 37.59 | temperature | 10.0 | 270 | > th | dose independent | rect. | 20 | 19 |
| 204 | 37.59 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 15 | 5 |
| 210 | 37.62 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 17 |
| 215 | 37.66 | wind | 1.0 | 270 | > th | dose independent | rect. | 15 | 5 |
| 224 | 37.71 | wind | 9.0 | 270 | < th | dose independent | rect. | 20 | 19 |
| 234 | 37.78 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 16 | 3 |
| 235 | 37.78 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 15 | 7 |
| 243 | 37.83 | radiation | 1.0 | 10 | < th | dose independent | rect. | 13 | 9 |
| 249 | 37.87 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 15 | 5 |
| 250 | 37.87 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 15 | 5 |
| 283 | 37.97 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 20 | 7 |
| 285 | 37.97 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 20 | 7 |
| 296 | 38.02 | temperature | 10.0 | 270 | > th | dose independent | rect. | 20 | 7 |
| 297 | 38.02 | temperature | 30.0 | 270 | < th | dose independent | rect. | 20 | 7 |
| 298 | 38.02 | humidity | 50.0 | 270 | > th | dose independent | rect. | 20 | 7 |
| 301 | 38.02 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 20 | 7 |
| 302 | 38.02 | radiation | 1.0 | 270 | < th | dose independent | rect. | 20 | 7 |
| 307 | 38.02 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 9 |
| 308 | 38.02 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 17 |
| 309 | 38.02 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 17 |
| 310 | 38.02 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 20 | 7 |
| 321 | 38.05 | wind | 9.0 | 270 | < th | dose independent | rect. | 20 | 7 |
| 327 | 38.07 | wind | 9.0 | 270 | < th | dose independent | rect. | 3 | 17 |
| 332 | 38.09 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 20 | 19 |
| 338 | 38.11 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 16 | 15 |
| 341 | 38.11 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 16 | 15 |
| 343 | 38.12 | radiation | 1.0 | 10 | < th | dose independent | rect. | 15 | 7 |
| 366 | 38.15 | radiation | 1.0 | 270 | > th | dose independent | rect. | 4 | 12 |
| 385 | 38.18 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 22 | 19 |
| 419 | 38.37 | humidity | 90.0 | 270 | < th | dose independent | rect. | 7 | 9 |
| 435 | 38.46 | humidity | 90.0 | 270 | < th | dose independent | rect. | 8 | 7 |
| 468 | 38.55 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 17 |
| 471 | 38.55 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 17 |
| 542 | 38.75 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 20 | 6 |
| 551 | 38.78 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 16 | 3 |
| 554 | 38.79 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 5 | 16 |
| 603 | 38.88 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 9 |
| 615 | 38.91 | humidity | 60.0 | 270 | > th | dose dependent | rect. | 2 | 17 |
| 619 | 38.93 | temperature | 30.0 | 270 | < th | dose independent | rect. | 1 | 9 |
| 652 | 38.99 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 5 | 16 |
| 673 | 39.07 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 22 | 19 |
| 676 | 39.08 | radiation | 20.0 | 270 | < th | dose independent | rect. | 2 | 18 |
| 698 | 39.13 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 8 | 10 |
| 737 | 39.22 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 9 |
| 763 | 39.30 | wind | 1.0 | 270 | > th | dose independent | rect. | 20 | 7 |
| 808 | 39.39 | temperature | 25.0 | 270 | < th | dose independent | rect. | 2 | 18 |
| 852 | 39.47 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 17 | 1 |
| 920 | 39.56 | humidity | 80.0 | 270 | > th | dose independent | rect. | 2 | 17 |
| 921 | 39.56 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 20 | 19 |
| 986 | 39.68 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 10 | 15 |
| 991 | 39.68 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 10 | 15 |