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Os10g0111300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Nitrate transporter (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.1 (0.0193) R2 : 0.798
β1 : 1.18 (0.0708) R2dD : 0.129 R2D : 0.0752
β2 : 4.82 (0.134) R2dC : 4.3 R2C : -1.91
β3 : 3.23 (0.118) R2dE : 2.54 R2E : -3.6
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.408 (0.0414) R2dN8 : 0.0595 R2N8 : -0.00895
σ : 0.361
deviance : 60.16
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_____
C
peak time of C : 15.8
E
wheather : radiation
threshold : 0.737
memory length : 352
response mode : < th
dose dependency : dose dependent
G
type of G : sin
peak or start time of G : 6.55
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
60.54 0.366 10.1 1.19 4.56 2.98 -0.276 0.06 0.409 15.8 0.2509 340 6.41 --
60.1 0.361 10.1 1.17 4.69 3.09 -0.365 -- 0.402 15.8 0.7201 344 6.44 --
60.05 0.361 10.1 1.18 4.79 3.21 -- 0.233 0.415 15.7 0.7256 344 6.5 --
60.16 0.361 10.1 1.18 4.82 3.23 -- -- 0.408 15.8 0.737 352 6.55 --
244.35 0.732 10.1 1.05 -- 0.54 -- 0.277 0.295 -- 9.987 4372 8.09 --
86.21 0.435 10.2 1.1 1.86 -- -0.413 -- 0.332 18.2 -- -- -- --
86.63 0.436 10.2 1.1 1.86 -- -- -- 0.331 18.2 -- -- -- --
186.03 0.635 10.2 0.541 -- 2.26 -- -- 0.172 -- 106.1 5049 17.8 --
96.94 0.459 10.2 -- 4.83 3.25 -- -- 0.278 15.8 0.8999 357 6.55 --
266.12 0.762 10.1 1.05 -- -- -- -- 0.29 -- -- -- -- --
118.69 0.51 10.2 -- 1.84 -- -- -- 0.208 18.3 -- -- -- --
120.28 0.511 10.1 -- -- 2.05 -- -- 0.249 -- 250.1 584 16.7 --
295.32 0.802 10.2 -- -- -- -- -- 0.173 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 58.06 temperature 15.0 270 > th dose independent rect. 1 10
2 58.99 precipitation 0.1 270 < th dose independent rect. 1 10
3 58.99 precipitation 0.1 270 < th dose dependent rect. 1 10
4 59.48 wind 1.0 90 > th dose independent rect. 23 17
5 59.84 wind 7.0 270 < th dose independent rect. 1 10
11 60.46 atmosphere 995.0 270 > th dose independent rect. 1 10
12 60.46 atmosphere 1015.0 270 < th dose independent rect. 1 10
13 60.46 temperature 10.0 270 > th dose independent rect. 11 14
14 60.58 humidity 50.0 270 > th dose independent rect. 1 10
15 61.03 radiation 1.0 270 < th dose dependent rect. 20 18
18 61.14 temperature 15.0 270 > th dose independent rect. 15 6
20 61.20 atmosphere 1010.0 270 < th dose independent rect. 15 6
27 61.27 radiation 40.0 270 < th dose independent rect. 15 6
29 61.38 temperature 10.0 270 > th dose independent rect. 21 18
30 61.40 atmosphere 995.0 90 > th dose independent rect. 16 7
32 61.50 wind 9.0 270 < th dose independent rect. 15 6
33 61.52 temperature 10.0 270 > th dose dependent rect. 1 9
34 61.53 wind 9.0 270 < th dose independent rect. 11 14
36 61.56 precipitation 0.1 270 < th dose independent rect. 11 14
37 61.56 precipitation 0.1 270 < th dose dependent rect. 11 14
43 61.68 radiation 1.0 270 < th dose independent rect. 20 18
47 61.77 radiation 40.0 90 < th dose dependent rect. 16 7
48 61.78 wind 1.0 270 > th dose independent rect. 15 6
53 61.83 temperature 10.0 90 > th dose independent rect. 23 17
54 61.85 atmosphere 995.0 270 > th dose independent rect. 21 18
55 61.87 precipitation 0.1 270 < th dose independent rect. 15 6
56 61.87 precipitation 0.1 270 < th dose dependent rect. 15 6
61 61.91 wind 9.0 270 < th dose independent rect. 21 18
84 62.72 atmosphere 995.0 90 > th dose independent rect. 23 17
89 62.84 wind 9.0 90 < th dose independent rect. 23 17
90 62.85 precipitation 0.1 270 < th dose independent rect. 21 18
91 62.85 precipitation 0.1 270 < th dose dependent rect. 21 18
97 62.89 precipitation 0.1 90 < th dose independent rect. 23 17
98 62.89 precipitation 0.1 90 < th dose dependent rect. 23 17
100 62.94 humidity 50.0 270 > th dose independent rect. 21 18
107 63.07 atmosphere 995.0 10 > th dose independent rect. 16 7
140 63.45 atmosphere 1010.0 270 < th dose independent rect. 16 4
150 63.54 temperature 10.0 10 > th dose independent rect. 16 7
152 63.54 atmosphere 1010.0 10 < th dose independent rect. 16 7
154 63.54 radiation 40.0 10 < th dose independent rect. 16 7
155 63.54 temperature 10.0 10 > th dose independent rect. 23 17
156 63.54 atmosphere 1015.0 90 < th dose independent rect. 23 17
157 63.55 temperature 15.0 270 > th dose independent rect. 16 4
174 63.61 temperature 10.0 10 > th dose dependent rect. 5 18
177 63.65 radiation 1.0 30 < th dose independent rect. 23 18
178 63.66 radiation 1.0 10 < th dose dependent rect. 23 18
183 63.68 temperature 10.0 270 > th dose independent rect. 20 20
184 63.69 wind 9.0 270 < th dose independent rect. 16 4
204 63.77 atmosphere 995.0 90 > th dose dependent rect. 16 6
217 63.81 atmosphere 995.0 270 > th dose independent rect. 16 4
218 63.83 precipitation 0.1 10 < th dose independent rect. 16 7
219 63.83 precipitation 0.1 10 < th dose dependent rect. 16 7
221 63.87 temperature 30.0 270 < th dose independent rect. 1 9
223 63.88 wind 1.0 270 > th dose independent rect. 10 15
230 63.93 wind 1.0 270 > th dose independent rect. 16 4
232 63.94 humidity 50.0 10 > th dose independent rect. 17 6
243 63.98 precipitation 0.1 270 < th dose independent rect. 16 4
244 63.98 precipitation 0.1 270 < th dose dependent rect. 16 4
264 64.07 temperature 15.0 270 > th dose independent rect. 4 16
269 64.09 wind 9.0 270 < th dose dependent rect. 2 8
285 64.22 temperature 10.0 270 > th dose dependent rect. 16 17
287 64.23 wind 9.0 270 < th dose independent rect. 20 20
288 64.24 atmosphere 995.0 10 > th dose independent rect. 23 17
293 64.28 temperature 10.0 270 > th dose dependent rect. 15 19
306 64.36 temperature 10.0 270 > th dose dependent rect. 15 6
314 64.39 temperature 10.0 1440 > th dose independent rect. 17 7
317 64.39 radiation 30.0 1440 < th dose independent rect. 17 7
323 64.39 temperature 10.0 1440 > th dose independent rect. 24 17
326 64.39 radiation 40.0 270 < th dose dependent rect. 16 3
338 64.42 radiation 1.0 30 < th dose independent rect. 23 15
344 64.43 atmosphere 995.0 10 > th dose dependent rect. 17 6
348 64.45 humidity 50.0 90 > th dose independent rect. 23 17
353 64.50 radiation 1.0 30 < th dose dependent rect. 23 15
371 64.58 atmosphere 1015.0 270 < th dose independent rect. 21 18
403 64.74 wind 9.0 90 < th dose dependent rect. 16 6
419 64.84 precipitation 0.1 270 < th dose independent rect. 15 18
420 64.84 precipitation 0.1 270 < th dose dependent rect. 15 18
423 64.85 temperature 10.0 270 > th dose independent rect. 9 6
424 64.85 atmosphere 1015.0 270 < th dose independent rect. 9 6
426 64.85 temperature 10.0 270 > th dose independent rect. 15 18
431 64.87 wind 9.0 270 < th dose dependent rect. 16 4
441 64.95 wind 9.0 270 < th dose independent rect. 15 18
450 64.99 radiation 1.0 30 < th dose independent rect. 23 13
472 65.05 radiation 1.0 10 < th dose dependent rect. 23 13
477 65.06 precipitation 0.1 270 < th dose independent rect. 20 20
479 65.06 precipitation 0.1 270 < th dose dependent rect. 20 20
481 65.07 wind 1.0 270 > th dose independent rect. 9 6
487 65.10 radiation 1.0 30 < th dose independent rect. 23 9
501 65.15 precipitation 0.1 270 < th dose independent rect. 9 6
504 65.15 precipitation 0.1 270 < th dose dependent rect. 9 6
516 65.19 radiation 1.0 30 < th dose dependent rect. 23 9
523 65.20 humidity 50.0 270 > th dose independent rect. 20 20
526 65.22 temperature 15.0 270 > th dose independent rect. 1 21
545 65.30 wind 9.0 270 < th dose independent rect. 9 6
551 65.31 precipitation 0.1 270 < th dose independent rect. 3 17
555 65.31 wind 9.0 10 < th dose dependent rect. 16 7
556 65.31 precipitation 0.1 270 < th dose dependent rect. 3 17
568 65.35 atmosphere 995.0 270 > th dose independent rect. 9 6
570 65.35 atmosphere 995.0 270 > th dose independent rect. 15 18
579 65.40 radiation 1.0 10 < th dose dependent rect. 23 7
618 65.64 atmosphere 995.0 270 > th dose dependent rect. 16 3
631 65.70 radiation 40.0 270 < th dose independent rect. 15 18
638 65.72 humidity 50.0 270 > th dose independent rect. 17 2
682 65.88 radiation 1.0 10 < th dose independent rect. 23 7
683 65.88 wind 9.0 270 < th dose independent rect. 3 17
691 65.92 wind 9.0 270 < th dose independent rect. 20 8
692 65.92 temperature 10.0 270 > th dose independent rect. 20 8
693 65.92 temperature 30.0 270 < th dose independent rect. 20 8
694 65.92 humidity 50.0 270 > th dose independent rect. 20 8
697 65.92 atmosphere 995.0 270 > th dose independent rect. 20 8
698 65.92 radiation 1.0 270 < th dose independent rect. 20 8
705 65.92 atmosphere 1015.0 270 < th dose independent rect. 4 16
707 65.92 radiation 1.0 270 < th dose dependent rect. 20 8
756 66.03 precipitation 0.1 270 < th dose independent rect. 20 7
757 66.03 precipitation 0.1 270 < th dose dependent rect. 20 7
828 66.30 humidity 50.0 270 > th dose independent rect. 9 6
850 66.39 wind 9.0 10 < th dose independent rect. 5 18
855 66.40 temperature 10.0 270 > th dose dependent rect. 17 2
864 66.41 atmosphere 995.0 10 > th dose independent rect. 5 18
868 66.43 wind 1.0 270 > th dose independent rect. 20 9
880 66.47 humidity 50.0 1440 > th dose independent rect. 18 6
900 66.48 atmosphere 995.0 270 > th dose independent rect. 3 17
927 66.57 wind 7.0 10 < th dose independent rect. 23 6
942 66.63 atmosphere 995.0 270 > th dose independent rect. 10 15
953 66.66 radiation 1.0 270 < th dose dependent sin 12 NA
961 66.68 temperature 10.0 10 > th dose independent rect. 23 6
962 66.68 temperature 30.0 10 < th dose independent rect. 23 6
963 66.68 humidity 50.0 10 > th dose independent rect. 23 6
966 66.68 atmosphere 995.0 10 > th dose independent rect. 23 6
972 66.68 wind 1.0 90 > th dose independent rect. 22 7
973 66.68 temperature 10.0 10 > th dose independent rect. 5 18
975 66.68 atmosphere 1015.0 10 < th dose independent rect. 5 18
986 66.69 temperature 15.0 270 > th dose independent rect. 14 21
989 66.70 wind 7.0 90 < th dose independent rect. 22 6