Os10g0110800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Nitrate transporter (Fragment).
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Os10g0110800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Nitrate transporter (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 228.58 | 0.71 | 7.45 | -2.82 | 0.934 | 2.75 | -0.51 | -4.79 | -0.339 | 12.3 | 26.31 | 1265 | -- | -- |
| 234.49 | 0.713 | 7.33 | -1.67 | 0.959 | 2.24 | -0.378 | -- | -0.152 | 12.2 | 26.12 | 1263 | -- | -- |
| 229.65 | 0.706 | 7.44 | -2.76 | 0.933 | 2.72 | -- | -4.53 | -0.302 | 12.2 | 26.46 | 1264 | -- | -- |
| 234.3 | 0.713 | 7.3 | -1.65 | 0.938 | 2.26 | -- | -- | -0.0399 | 12.3 | 26.6 | 1240 | -- | -- |
| 268.55 | 0.763 | 7.46 | -2.7 | -- | 2.56 | -- | -3.98 | -0.347 | -- | 26.15 | 1521 | -- | -- |
| 440.12 | 0.984 | 7.29 | -0.933 | 0.578 | -- | -0.797 | -- | 0.00865 | 11.8 | -- | -- | -- | -- |
| 442.78 | 0.985 | 7.29 | -0.966 | 0.583 | -- | -- | -- | 0.00422 | 11.5 | -- | -- | -- | -- |
| 257.87 | 0.748 | 7.36 | -1.81 | -- | 2.21 | -- | -- | -0.238 | -- | 26.22 | 5968 | -- | -- |
| 300.88 | 0.808 | 7.24 | -- | 0.904 | 1.93 | -- | -- | 0.248 | 12.1 | 27.6 | 1224 | -- | -- |
| 464.15 | 1.01 | 7.3 | -0.982 | -- | -- | -- | -- | -0.00219 | -- | -- | -- | -- | -- |
| 467.37 | 1.01 | 7.27 | -- | 0.594 | -- | -- | -- | 0.112 | 11.6 | -- | -- | -- | -- |
| 333.67 | 0.851 | 7.28 | -- | -- | 1.82 | -- | -- | 0.0875 | -- | 27.61 | 6011 | -- | -- |
| 489.57 | 1.03 | 7.28 | -- | -- | -- | -- | -- | 0.107 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 226.26 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 6 |
| 44 | 229.80 | temperature | 25 | 1440 | > th | dose dependent | sin | 18 | NA |
| 45 | 229.80 | temperature | 25 | 1440 | > th | dose dependent | rect. | 12 | 19 |
| 131 | 233.98 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 15 |
| 192 | 235.09 | temperature | 30 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 220 | 235.57 | temperature | 30 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 240 | 235.80 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 271 | 236.77 | temperature | 25 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 272 | 236.89 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 13 |
| 275 | 236.90 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 11 |
| 277 | 236.90 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 17 |
| 392 | 241.32 | temperature | 30 | 14400 | < th | dose independent | sin | 14 | NA |
| 415 | 241.57 | temperature | 30 | 14400 | > th | dose independent | sin | 14 | NA |
| 425 | 241.61 | humidity | 70 | 14400 | < th | dose independent | rect. | 18 | 13 |
| 444 | 241.85 | humidity | 70 | 14400 | < th | dose independent | rect. | 18 | 3 |
| 485 | 243.08 | temperature | 25 | 14400 | > th | dose dependent | rect. | 15 | 14 |
| 561 | 244.46 | radiation | 20 | 1440 | < th | dose dependent | rect. | 17 | 13 |
| 567 | 244.53 | temperature | 25 | 14400 | > th | dose dependent | sin | 16 | NA |
| 668 | 245.98 | radiation | 1 | 1440 | > th | dose dependent | rect. | 17 | 13 |
| 784 | 247.46 | humidity | 70 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 795 | 247.60 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 17 |
| 800 | 247.62 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 14 |
| 838 | 247.70 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 11 |
| 842 | 247.77 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 6 |
| 848 | 247.82 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 8 |
| 877 | 248.29 | temperature | 30 | 1440 | > th | dose independent | rect. | 14 | 5 |
| 941 | 249.01 | temperature | 25 | 14400 | > th | dose dependent | rect. | 2 | 18 |
| 942 | 249.01 | temperature | 25 | 14400 | > th | dose dependent | rect. | 2 | 21 |
| 956 | 249.07 | temperature | 25 | 14400 | > th | dose dependent | rect. | 22 | 22 |
| 988 | 249.22 | temperature | 25 | 14400 | > th | dose dependent | no | NA | NA |