Os10g0105800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0105800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 100.63 | 0.471 | 3.07 | -0.159 | 0.0691 | -0.562 | -0.105 | 2.36 | 0.0226 | 12.3 | 1.009 | 15 | -- | -- |
| 105.64 | 0.479 | 3.07 | -0.0657 | 0.0763 | -0.403 | 0.0275 | -- | 0.0333 | 11.4 | 1.1 | 14 | -- | -- |
| 100.54 | 0.467 | 3.08 | -0.171 | 0.0713 | -0.581 | -- | 2.42 | 0.0202 | 12.4 | 1.04 | 16 | -- | -- |
| 105.54 | 0.478 | 3.05 | -0.066 | 0.0721 | -0.393 | -- | -- | 0.0465 | 10.9 | 1.1 | 14 | -- | -- |
| 100.85 | 0.468 | 3.08 | -0.17 | -- | -0.556 | -- | 2.41 | 0.019 | -- | 1.049 | 16 | -- | -- |
| 108.88 | 0.489 | 3.05 | -0.0226 | 0.122 | -- | -0.193 | -- | 0.0418 | 6.48 | -- | -- | -- | -- |
| 108.97 | 0.489 | 3.05 | -0.025 | 0.121 | -- | -- | -- | 0.0425 | 6.68 | -- | -- | -- | -- |
| 105.85 | 0.479 | 3.05 | -0.0693 | -- | -0.385 | -- | -- | 0.0462 | -- | 1.093 | 14 | -- | -- |
| 105.66 | 0.479 | 3.05 | -- | 0.0697 | -0.386 | -- | -- | 0.0528 | 10.9 | 1 | 14 | -- | -- |
| 109.74 | 0.49 | 3.05 | -0.0222 | -- | -- | -- | -- | 0.045 | -- | -- | -- | -- | -- |
| 108.99 | 0.488 | 3.05 | -- | 0.121 | -- | -- | -- | 0.0453 | 6.69 | -- | -- | -- | -- |
| 105.98 | 0.479 | 3.05 | -- | -- | -0.376 | -- | -- | 0.0538 | -- | 1.091 | 14 | -- | -- |
| 109.76 | 0.489 | 3.05 | -- | -- | -- | -- | -- | 0.0474 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 92.33 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 2 | 1 |
| 2 | 94.58 | temperature | 30.0 | 10 | < th | dose independent | rect. | 3 | 23 |
| 3 | 94.67 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 2 | 1 |
| 4 | 94.72 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 6 | 94.81 | atmosphere | 1000.0 | 10 | > th | dose dependent | rect. | 2 | 1 |
| 7 | 94.82 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 9 | 94.85 | wind | 3.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 17 | 94.95 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 19 | 94.95 | temperature | 25.0 | 90 | > th | dose independent | rect. | 2 | 1 |
| 20 | 94.95 | temperature | 30.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 21 | 94.95 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 25 | 94.95 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 27 | 94.95 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 32 | 94.95 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 33 | 94.95 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 35 | 94.95 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 40 | 94.95 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 43 | 95.03 | wind | 9.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 45 | 95.07 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 46 | 95.12 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 49 | 95.16 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 95 | 96.04 | humidity | 60.0 | 30 | < th | dose dependent | rect. | 17 | 18 |
| 101 | 96.19 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 105 | 96.21 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 106 | 96.21 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 109 | 96.21 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 113 | 96.21 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 122 | 96.21 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 123 | 96.21 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 143 | 96.21 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 146 | 96.21 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 170 | 96.60 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 3 | 23 |
| 171 | 96.60 | radiation | 40.0 | 10 | > th | dose dependent | sin | 12 | NA |
| 173 | 96.62 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 5 | 4 |
| 180 | 96.87 | radiation | 40.0 | 10 | > th | dose dependent | rect. | 12 | 23 |
| 182 | 96.92 | humidity | 60.0 | 30 | < th | dose independent | rect. | 17 | 17 |
| 200 | 97.34 | humidity | 60.0 | 90 | < th | dose dependent | rect. | 9 | 1 |
| 215 | 97.36 | humidity | 60.0 | 90 | < th | dose independent | rect. | 8 | 2 |
| 230 | 97.38 | humidity | 60.0 | 1440 | < th | dose independent | rect. | 8 | 1 |
| 298 | 97.41 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 23 |
| 313 | 97.41 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 314 | 97.44 | humidity | 60.0 | 10 | < th | dose independent | rect. | 10 | 1 |
| 316 | 97.44 | humidity | 60.0 | 10 | < th | dose dependent | rect. | 10 | 1 |
| 382 | 97.47 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 22 | 11 |
| 418 | 97.49 | wind | 1.0 | 10 | < th | dose dependent | rect. | 9 | 1 |
| 458 | 97.63 | wind | 1.0 | 10 | < th | dose independent | rect. | 9 | 1 |
| 564 | 98.16 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 566 | 98.17 | radiation | 40.0 | 30 | > th | dose dependent | rect. | 9 | 1 |
| 671 | 98.42 | wind | 1.0 | 10 | < th | dose independent | rect. | 9 | 18 |
| 694 | 98.46 | wind | 1.0 | 10 | > th | dose independent | rect. | 13 | 23 |
| 713 | 98.61 | wind | 1.0 | 10 | < th | dose independent | rect. | 6 | 21 |
| 714 | 98.61 | humidity | 50.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 795 | 99.16 | wind | 1.0 | 10 | > th | dose independent | sin | 1 | NA |
| 828 | 99.32 | radiation | 40.0 | 10 | > th | dose independent | sin | 12 | NA |
| 864 | 99.59 | wind | 1.0 | 10 | < th | dose dependent | sin | 21 | NA |
| 868 | 99.66 | wind | 1.0 | 10 | < th | dose independent | rect. | 2 | 8 |
| 886 | 99.73 | radiation | 40.0 | 10 | > th | dose independent | rect. | 12 | 23 |
| 917 | 99.84 | wind | 1.0 | 10 | < th | dose independent | sin | 20 | NA |
| 956 | 99.90 | wind | 1.0 | 10 | < th | dose independent | rect. | 2 | 11 |
| 965 | 100.03 | wind | 1.0 | 10 | < th | dose independent | sin | 23 | NA |
| 995 | 100.19 | humidity | 90.0 | 90 | < th | dose independent | rect. | 1 | 2 |