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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os10g0104800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein kinase-like domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.11 (0.0214) R2 : 0.00618
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0759 (0.0451) R2dN8 : 0.00798 R2N8 : 0.00618
σ : 0.403
deviance : 74.61
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
72.47 0.4 2.95 0.91 0.0863 -8.82 -0.292 54.4 0.0822 5.94 996.7 1386 -- --
73.86 0.403 3.11 0.0208 0.104 0.151 -0.227 -- 0.0773 6.01 996.7 1386 -- --
72.67 0.397 2.95 0.908 0.0851 -8.84 -- 54.5 0.0833 6.17 996.7 1382 -- --
72.9 0.398 3.11 0.00438 0.0908 0.487 -- -- 0.0861 6.06 997.7 1396 -- --
73.05 0.398 2.95 0.913 -- -8.97 -- 55.3 0.0857 -- 996.8 1362 -- --
73.93 0.403 3.11 0.025 0.102 -- -0.236 -- 0.0756 6 -- -- -- --
74.06 0.403 3.11 0.0233 0.101 -- -- -- 0.0766 6.39 -- -- -- --
73.35 0.399 3.11 0.00604 -- 0.499 -- -- 0.0868 -- 997.7 1385 -- --
72.9 0.398 3.1 -- 0.0939 0.489 -- -- 0.0847 6.47 997.7 1392 -- --
74.59 0.404 3.11 0.0259 -- -- -- -- 0.0788 -- -- -- -- --
74.08 0.403 3.11 -- 0.101 -- -- -- 0.074 6.37 -- -- -- --
73.36 0.399 3.11 -- -- 0.503 -- -- 0.0867 -- 997.7 1385 -- --
74.61 0.403 3.11 -- -- -- -- -- 0.0759 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 67.06 atmosphere 1005.0 10 > th dose independent rect. 20 1
2 67.08 temperature 30.0 30 < th dose dependent rect. 20 1
3 67.08 radiation 1.0 1440 < th dose dependent rect. 21 1
4 67.11 wind 5.0 10 < th dose dependent rect. 20 1
7 67.13 wind 5.0 10 < th dose independent rect. 20 1
10 67.15 atmosphere 1000.0 10 > th dose dependent rect. 20 1
16 67.18 atmosphere 995.0 30 > th dose independent rect. 21 23
17 67.18 atmosphere 1015.0 30 < th dose dependent rect. 20 1
18 67.19 wind 1.0 10 > th dose independent rect. 20 1
23 67.19 temperature 10.0 10 > th dose independent rect. 20 1
27 67.19 temperature 30.0 10 < th dose independent rect. 20 1
29 67.19 humidity 50.0 10 > th dose independent rect. 20 1
35 67.19 atmosphere 995.0 10 > th dose independent rect. 20 1
39 67.19 atmosphere 1010.0 10 < th dose independent rect. 20 1
43 67.19 radiation 1.0 10 < th dose independent rect. 20 1
53 67.19 precipitation 0.1 10 < th dose independent rect. 20 1
55 67.19 temperature 10.0 10 > th dose independent rect. 21 23
58 67.19 humidity 50.0 30 > th dose dependent rect. 20 1
59 67.19 radiation 1.0 10 < th dose dependent rect. 20 1
69 67.19 precipitation 0.1 10 < th dose dependent rect. 20 1
73 67.20 humidity 90.0 30 < th dose dependent rect. 20 1
80 67.22 humidity 90.0 30 < th dose independent rect. 20 1
84 67.23 temperature 10.0 30 > th dose dependent rect. 20 1
93 67.25 temperature 10.0 1440 > th dose independent rect. 21 1
96 67.25 temperature 30.0 1440 < th dose independent rect. 21 1
100 67.25 humidity 50.0 1440 > th dose independent rect. 21 1
106 67.25 atmosphere 995.0 1440 > th dose independent rect. 21 1
107 67.25 radiation 1.0 1440 < th dose independent rect. 21 1
127 67.25 temperature 10.0 1440 > th dose independent rect. 22 23
132 67.26 wind 1.0 30 > th dose dependent rect. 20 1
133 67.26 temperature 25.0 30 > th dose dependent rect. 20 1
137 67.27 radiation 40.0 14400 < th dose dependent rect. 21 1
151 67.32 precipitation 0.1 30 < th dose independent rect. 21 23
153 67.32 precipitation 0.1 30 < th dose dependent rect. 21 23
173 67.69 wind 9.0 30 < th dose independent rect. 21 23
178 68.11 humidity 50.0 10 > th dose independent rect. 21 23
211 69.45 atmosphere 1000.0 90 < th dose dependent rect. 8 3
220 69.55 temperature 25.0 30 > th dose dependent rect. 20 12
221 69.57 temperature 25.0 30 > th dose dependent rect. 20 9
271 70.01 precipitation 0.1 1440 < th dose independent rect. 21 1
272 70.01 precipitation 0.1 1440 < th dose dependent rect. 21 1
312 70.16 radiation 1.0 720 < th dose dependent rect. 21 8
313 70.19 radiation 10.0 10 < th dose dependent rect. 21 23
316 70.24 temperature 30.0 30 < th dose independent rect. 21 23
317 70.25 wind 9.0 1440 < th dose independent rect. 21 1
327 70.31 atmosphere 1015.0 30 < th dose independent rect. 21 23
407 70.69 temperature 10.0 30 > th dose dependent rect. 21 23
417 70.76 radiation 1.0 720 < th dose independent rect. 21 9
448 70.93 humidity 50.0 90 > th dose dependent rect. 21 14
457 71.00 temperature 10.0 720 > th dose independent rect. 9 8
458 71.00 atmosphere 1015.0 720 < th dose independent rect. 9 8
459 71.00 temperature 10.0 720 > th dose independent rect. 17 16
466 71.03 temperature 10.0 720 > th dose independent rect. 21 8
467 71.03 temperature 30.0 720 < th dose independent rect. 21 8
468 71.03 humidity 50.0 720 > th dose independent rect. 21 8
471 71.03 atmosphere 995.0 720 > th dose independent rect. 21 8
475 71.03 precipitation 0.1 720 < th dose independent rect. 19 8
476 71.03 temperature 10.0 720 > th dose independent rect. 5 16
479 71.03 precipitation 0.1 720 < th dose dependent rect. 19 8
480 71.05 atmosphere 1000.0 90 < th dose independent rect. 8 3
481 71.05 precipitation 0.1 720 < th dose independent rect. 5 16
484 71.05 precipitation 0.1 720 < th dose dependent rect. 5 16
492 71.08 radiation 20.0 10 < th dose dependent rect. 21 13
494 71.09 wind 3.0 720 < th dose dependent rect. 2 1
498 71.10 atmosphere 995.0 720 > th dose independent rect. 17 16
500 71.10 radiation 10.0 10 < th dose independent rect. 21 23
507 71.12 atmosphere 1000.0 90 < th dose independent rect. 8 1
508 71.12 atmosphere 1000.0 10 < th dose independent rect. 9 1
518 71.12 atmosphere 995.0 720 > th dose independent rect. 9 8
526 71.15 temperature 25.0 90 > th dose independent rect. 19 13
527 71.15 radiation 10.0 90 < th dose dependent rect. 21 12
529 71.16 atmosphere 1000.0 720 > th dose independent rect. 3 6
530 71.16 atmosphere 995.0 720 > th dose independent rect. 5 16
531 71.16 radiation 40.0 30 < th dose dependent rect. 21 14
537 71.18 humidity 90.0 90 < th dose independent rect. 1 7
538 71.18 precipitation 0.1 720 < th dose independent rect. 9 8
541 71.18 precipitation 0.1 720 < th dose dependent rect. 9 8
556 71.24 wind 1.0 90 > th dose independent rect. 6 15
608 71.29 precipitation 0.1 720 < th dose independent rect. 21 8
609 71.29 precipitation 0.1 720 < th dose dependent rect. 21 8
610 71.30 radiation 10.0 90 < th dose independent rect. 21 9
618 71.31 precipitation 0.1 90 < th dose independent rect. 6 15
624 71.31 precipitation 0.1 90 < th dose dependent rect. 6 15
625 71.32 temperature 10.0 90 > th dose independent rect. 21 9
626 71.32 temperature 30.0 90 < th dose independent rect. 21 9
627 71.32 humidity 50.0 90 > th dose independent rect. 21 9
630 71.32 atmosphere 995.0 90 > th dose independent rect. 21 9
634 71.32 wind 1.0 720 > th dose independent rect. 21 12
635 71.32 temperature 10.0 90 > th dose independent rect. 6 15
636 71.32 atmosphere 1015.0 90 < th dose independent rect. 6 15
640 71.33 humidity 50.0 90 > th dose dependent rect. 21 9
641 71.33 radiation 40.0 90 < th dose dependent rect. 21 9
644 71.34 wind 9.0 90 < th dose independent rect. 21 9
714 71.36 temperature 10.0 1440 > th dose independent rect. 7 15
732 71.37 precipitation 0.1 90 < th dose independent rect. 21 9
736 71.37 precipitation 0.1 90 < th dose dependent rect. 21 9
737 71.38 wind 7.0 4320 > th dose independent rect. 1 1
744 71.38 wind 7.0 4320 > th dose dependent rect. 1 1
759 71.41 wind 9.0 720 < th dose independent rect. 21 8
762 71.42 radiation 1.0 90 < th dose dependent rect. 15 6
774 71.43 humidity 50.0 30 > th dose dependent rect. 21 23
798 71.45 humidity 50.0 90 > th dose independent rect. 6 15
799 71.45 atmosphere 995.0 90 > th dose independent rect. 6 15
805 71.46 precipitation 0.1 720 < th dose independent rect. 15 16
813 71.46 precipitation 0.1 720 < th dose dependent rect. 15 16
815 71.47 wind 1.0 720 > th dose independent rect. 2 7
816 71.47 humidity 80.0 90 > th dose independent rect. 13 8
840 71.49 wind 1.0 720 > th dose independent rect. 21 18
844 71.50 wind 9.0 720 < th dose independent rect. 15 6
845 71.50 atmosphere 1005.0 90 < th dose independent rect. 4 7
847 71.50 precipitation 0.1 720 < th dose independent rect. 9 18
848 71.50 wind 1.0 720 > th dose independent rect. 12 21
856 71.50 precipitation 0.1 720 < th dose dependent rect. 9 18
859 71.51 radiation 1.0 90 < th dose independent rect. 15 6
861 71.51 wind 9.0 90 < th dose independent rect. 6 15
865 71.52 wind 1.0 720 < th dose independent rect. 2 2
866 71.52 atmosphere 1005.0 10 < th dose independent rect. 4 7
895 71.56 wind 1.0 30 > th dose independent rect. 21 23
898 71.56 wind 9.0 720 < th dose dependent rect. 24 8
907 71.57 radiation 1.0 90 < th dose independent rect. 10 11
909 71.57 atmosphere 1015.0 720 < th dose independent rect. 5 16
915 71.58 wind 1.0 720 > th dose independent rect. 21 9
919 71.58 wind 1.0 14400 < th dose dependent rect. 2 1
931 71.59 wind 1.0 720 > th dose independent rect. 18 15
932 71.59 wind 5.0 270 > th dose dependent rect. 2 1
942 71.60 atmosphere 1005.0 10 > th dose independent rect. 19 13
966 71.63 wind 5.0 270 > th dose independent rect. 2 1
982 71.64 wind 9.0 720 < th dose independent rect. 19 8
989 71.64 wind 3.0 720 < th dose dependent rect. 1 7