Os10g0100900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os10g0100900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 150.5 | 0.576 | 7.69 | 3.35 | 0.497 | -2.66 | -0.182 | 0.287 | 1.09 | 13.6 | 9.052 | 62 | -- | -- |
| 150.49 | 0.571 | 7.7 | 3.31 | 0.502 | -2.66 | -0.107 | -- | 1.08 | 13.5 | 9.932 | 58 | -- | -- |
| 150.55 | 0.571 | 7.7 | 3.33 | 0.496 | -2.65 | -- | 0.186 | 1.08 | 13.5 | 10.62 | 58 | -- | -- |
| 150.54 | 0.571 | 7.7 | 3.31 | 0.503 | -2.67 | -- | -- | 1.08 | 13.5 | 9.562 | 58 | -- | -- |
| 160.83 | 0.591 | 7.72 | 3.21 | -- | -2.13 | -- | 0.125 | 0.994 | -- | 8.766 | 109 | -- | -- |
| 217.41 | 0.691 | 7.78 | 2.77 | 0.323 | -- | 0.94 | -- | 0.706 | 4.97 | -- | -- | -- | -- |
| 219.68 | 0.694 | 7.78 | 2.77 | 0.329 | -- | -- | -- | 0.701 | 4.91 | -- | -- | -- | -- |
| 160.83 | 0.591 | 7.72 | 3.19 | -- | -2.12 | -- | -- | 0.989 | -- | 9.282 | 109 | -- | -- |
| 410 | 0.948 | 7.82 | -- | 0.223 | -1.06 | -- | -- | 0.519 | 8.13 | -1.339 | 58 | -- | -- |
| 225.39 | 0.702 | 7.78 | 2.78 | -- | -- | -- | -- | 0.71 | -- | -- | -- | -- | -- |
| 421.93 | 0.961 | 7.85 | -- | 0.38 | -- | -- | -- | 0.393 | 4.68 | -- | -- | -- | -- |
| 411.94 | 0.945 | 7.83 | -- | -- | -0.957 | -- | -- | 0.497 | -- | 16.69 | 59 | -- | -- |
| 429.59 | 0.967 | 7.85 | -- | -- | -- | -- | -- | 0.401 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 138.79 | temperature | 15 | 90 | > th | dose dependent | rect. | 7 | 23 |
| 11 | 145.90 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 20 |
| 52 | 151.00 | temperature | 10 | 90 | > th | dose dependent | no | NA | NA |
| 59 | 151.66 | temperature | 30 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 63 | 152.06 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 65 | 152.45 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 75 | 152.93 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 79 | 153.17 | temperature | 30 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 81 | 153.19 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 90 | 153.84 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 96 | 154.39 | temperature | 15 | 90 | > th | dose dependent | rect. | 20 | 23 |
| 102 | 154.82 | humidity | 50 | 14400 | < th | dose dependent | rect. | 16 | 19 |
| 109 | 155.17 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 110 | 155.26 | humidity | 50 | 14400 | > th | dose independent | rect. | 17 | 16 |
| 128 | 155.92 | humidity | 50 | 14400 | > th | dose independent | rect. | 16 | 18 |
| 131 | 156.07 | humidity | 60 | 14400 | < th | dose dependent | rect. | 17 | 3 |
| 132 | 156.07 | temperature | 15 | 90 | > th | dose dependent | rect. | 23 | 23 |
| 144 | 156.12 | humidity | 60 | 14400 | < th | dose dependent | rect. | 17 | 16 |
| 150 | 156.28 | humidity | 50 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 157 | 156.51 | temperature | 30 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 179 | 156.94 | humidity | 50 | 14400 | < th | dose independent | rect. | 16 | 19 |
| 184 | 157.19 | humidity | 50 | 14400 | < th | dose independent | rect. | 17 | 17 |
| 208 | 158.28 | temperature | 15 | 90 | > th | dose dependent | rect. | 1 | 23 |
| 221 | 158.79 | humidity | 60 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 228 | 158.98 | humidity | 60 | 14400 | > th | dose independent | rect. | 18 | 5 |
| 230 | 159.00 | humidity | 60 | 14400 | > th | dose independent | rect. | 18 | 3 |
| 234 | 159.03 | humidity | 60 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 240 | 159.11 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 5 |
| 242 | 159.14 | humidity | 60 | 14400 | < th | dose independent | rect. | 17 | 3 |
| 274 | 159.53 | humidity | 50 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 276 | 159.55 | humidity | 60 | 14400 | > th | dose independent | rect. | 18 | 13 |
| 289 | 159.82 | temperature | 10 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 299 | 160.12 | wind | 9 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 375 | 160.84 | wind | 7 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 378 | 160.95 | wind | 9 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 394 | 161.28 | wind | 9 | 43200 | > th | dose independent | rect. | 20 | 3 |
| 415 | 161.48 | wind | 9 | 43200 | > th | dose dependent | rect. | 16 | 14 |
| 419 | 161.53 | temperature | 15 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 421 | 161.55 | humidity | 60 | 90 | > th | dose dependent | rect. | 5 | 20 |
| 431 | 161.79 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 14 |
| 437 | 161.84 | wind | 9 | 43200 | < th | dose independent | rect. | 17 | 5 |
| 466 | 162.06 | wind | 9 | 43200 | > th | dose independent | rect. | 17 | 5 |
| 482 | 162.36 | wind | 9 | 43200 | < th | dose independent | rect. | 17 | 13 |
| 520 | 162.66 | wind | 9 | 43200 | < th | dose independent | rect. | 20 | 3 |
| 527 | 162.76 | temperature | 10 | 10 | > th | dose dependent | sin | 19 | NA |
| 542 | 162.91 | wind | 9 | 43200 | > th | dose independent | rect. | 17 | 12 |
| 546 | 162.95 | wind | 9 | 43200 | > th | dose dependent | rect. | 20 | 3 |
| 566 | 163.21 | wind | 9 | 43200 | > th | dose dependent | rect. | 16 | 9 |
| 587 | 163.43 | temperature | 30 | 30 | < th | dose dependent | sin | 20 | NA |
| 620 | 163.79 | humidity | 60 | 90 | > th | dose dependent | rect. | 5 | 10 |
| 712 | 164.69 | radiation | 40 | 90 | < th | dose independent | rect. | 5 | 10 |
| 769 | 165.28 | temperature | 15 | 90 | > th | dose dependent | rect. | 13 | 23 |
| 828 | 165.64 | temperature | 30 | 1440 | < th | dose dependent | rect. | 8 | 4 |
| 870 | 165.99 | radiation | 40 | 90 | < th | dose dependent | rect. | 5 | 20 |
| 916 | 166.31 | wind | 9 | 43200 | < th | dose independent | rect. | 20 | 10 |
| 931 | 166.39 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 960 | 166.63 | temperature | 15 | 90 | > th | dose dependent | rect. | 1 | 16 |
| 987 | 166.83 | wind | 1 | 43200 | < th | dose dependent | rect. | 19 | 2 |