Os10g0100200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os10g0100200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 94.71 | 0.457 | 2.93 | -0.185 | 0.14 | 0.0355 | -1.34 | 1.96 | 0.0663 | 6.2 | 92.66 | 390 | -- | -- |
| 97.52 | 0.463 | 2.94 | -0.0881 | 0.223 | -0.158 | -0.507 | -- | 0.0586 | 6.18 | 92.66 | 390 | -- | -- |
| 95.05 | 0.454 | 2.94 | -0.166 | 0.155 | 0.432 | -- | 2.68 | 0.0781 | 6.85 | 95.04 | 342 | -- | -- |
| 97.92 | 0.461 | 2.95 | -0.0926 | 0.257 | -0.205 | -- | -- | 0.0404 | 6.13 | 90.86 | 130 | -- | -- |
| 96.24 | 0.457 | 2.94 | -0.145 | -- | 0.636 | -- | 2.55 | 0.0893 | -- | 95 | 342 | -- | -- |
| 98 | 0.464 | 2.94 | -0.102 | 0.18 | -- | -0.574 | -- | 0.0791 | 6.38 | -- | -- | -- | -- |
| 98.68 | 0.465 | 2.94 | -0.108 | 0.183 | -- | -- | -- | 0.0817 | 7.38 | -- | -- | -- | -- |
| 99.54 | 0.465 | 2.94 | -0.0947 | -- | 0.431 | -- | -- | 0.0951 | -- | 95 | 342 | -- | -- |
| 98.1 | 0.461 | 2.94 | -- | 0.255 | -0.198 | -- | -- | 0.0539 | 6.34 | 90.98 | 130 | -- | -- |
| 100.46 | 0.468 | 2.94 | -0.105 | -- | -- | -- | -- | 0.0847 | -- | -- | -- | -- | -- |
| 98.98 | 0.465 | 2.94 | -- | 0.182 | -- | -- | -- | 0.0937 | 7.42 | -- | -- | -- | -- |
| 99.78 | 0.465 | 2.94 | -- | -- | 0.442 | -- | -- | 0.107 | -- | 95 | 342 | -- | -- |
| 100.75 | 0.469 | 2.94 | -- | -- | -- | -- | -- | 0.0963 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 87.43 | temperature | 25.0 | 270 | > th | dose independent | rect. | 1 | 1 |
| 4 | 88.21 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 2 | 2 |
| 6 | 88.35 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 1 | 4 |
| 12 | 88.93 | wind | 1.0 | 90 | < th | dose dependent | rect. | 8 | 2 |
| 16 | 89.46 | wind | 1.0 | 90 | < th | dose independent | rect. | 8 | 2 |
| 21 | 90.00 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 22 | 90.02 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 2 | 1 |
| 23 | 90.04 | wind | 3.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 33 | 90.13 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 35 | 90.13 | temperature | 25.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 37 | 90.13 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 41 | 90.13 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 43 | 90.13 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 48 | 90.13 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 49 | 90.13 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 50 | 90.13 | wind | 9.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 51 | 90.13 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 56 | 90.13 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 59 | 90.16 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 61 | 90.18 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 63 | 90.20 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 68 | 90.28 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 71 | 90.30 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 111 | 90.68 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 129 | 90.90 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 130 | 90.90 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 133 | 90.90 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 137 | 90.90 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 146 | 90.90 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 147 | 90.90 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 167 | 90.90 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 170 | 90.90 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 182 | 91.06 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 1 | 1 |
| 186 | 91.29 | atmosphere | 1010.0 | 90 | > th | dose independent | rect. | 8 | 1 |
| 187 | 91.29 | atmosphere | 1010.0 | 10 | > th | dose independent | rect. | 9 | 1 |
| 265 | 91.49 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 273 | 91.61 | atmosphere | 1005.0 | 90 | > th | dose dependent | rect. | 1 | 4 |
| 281 | 91.86 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 23 |
| 282 | 91.86 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 290 | 92.20 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 302 | 92.51 | temperature | 25.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 306 | 92.57 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 314 | 92.82 | humidity | 90.0 | 10 | < th | dose independent | rect. | 4 | 1 |
| 316 | 92.82 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 1 | 7 |
| 321 | 92.90 | wind | 1.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 329 | 93.03 | wind | 1.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 331 | 93.05 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 344 | 93.32 | radiation | 30.0 | 10 | < th | dose independent | sin | 11 | NA |
| 356 | 93.44 | humidity | 50.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 368 | 93.62 | humidity | 90.0 | 270 | < th | dose independent | rect. | 1 | 1 |
| 369 | 93.65 | wind | 1.0 | 10 | > th | dose independent | rect. | 5 | 23 |
| 372 | 93.70 | wind | 1.0 | 10 | < th | dose independent | rect. | 9 | 1 |
| 377 | 93.75 | humidity | 70.0 | 90 | < th | dose independent | rect. | 19 | 14 |
| 383 | 93.82 | humidity | 70.0 | 90 | < th | dose independent | rect. | 6 | 3 |
| 396 | 93.85 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 18 | 1 |
| 397 | 93.85 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 18 | 1 |
| 401 | 93.91 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 1 | 1 |
| 402 | 93.91 | radiation | 30.0 | 10 | > th | dose dependent | rect. | 7 | 1 |
| 434 | 93.93 | radiation | 30.0 | 10 | > th | dose independent | rect. | 7 | 1 |
| 452 | 93.94 | humidity | 80.0 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 557 | 93.97 | humidity | 70.0 | 90 | < th | dose dependent | rect. | 19 | 12 |
| 609 | 94.01 | humidity | 70.0 | 10 | < th | dose dependent | rect. | 18 | 14 |
| 628 | 94.03 | humidity | 70.0 | 10 | < th | dose independent | rect. | 7 | 1 |
| 854 | 94.13 | radiation | 20.0 | 10 | > th | dose dependent | sin | 11 | NA |
| 856 | 94.14 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 862 | 94.16 | atmosphere | 1010.0 | 10 | > th | dose independent | sin | 4 | NA |
| 879 | 94.20 | wind | 3.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 902 | 94.21 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 906 | 94.22 | temperature | 10.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 908 | 94.22 | temperature | 30.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 909 | 94.22 | humidity | 50.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 913 | 94.22 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 915 | 94.22 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 917 | 94.22 | radiation | 1.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 922 | 94.22 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 4 | 1 |
| 924 | 94.22 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 16 | 3 |
| 927 | 94.22 | temperature | 10.0 | 30 | > th | dose independent | rect. | 5 | 23 |
| 933 | 94.22 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 940 | 94.25 | temperature | 25.0 | 30 | > th | dose independent | rect. | 8 | 2 |
| 979 | 94.29 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 1 | 4 |
| 984 | 94.30 | atmosphere | 1000.0 | 270 | < th | dose independent | rect. | 16 | 1 |