Os09g0572600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Receptor protein kinase-like protein.
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Os09g0572600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Receptor protein kinase-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 287.52 | 0.797 | 3.39 | 1.59 | 0.156 | -1.33 | 0.156 | -0.554 | 0.416 | 2.72 | 19 | 763 | -- | -- |
| 287.74 | 0.79 | 3.38 | 1.71 | 0.161 | -1.35 | 0.138 | -- | 0.448 | 2.65 | 19.3 | 768 | -- | -- |
| 287.6 | 0.79 | 3.39 | 1.58 | 0.16 | -1.34 | -- | -0.572 | 0.418 | 2.87 | 18.9 | 769 | -- | -- |
| 287.79 | 0.79 | 3.38 | 1.7 | 0.16 | -1.34 | -- | -- | 0.447 | 2.82 | 19.39 | 768 | -- | -- |
| 288.36 | 0.791 | 3.39 | 1.6 | -- | -1.34 | -- | -0.457 | 0.421 | -- | 19 | 680 | -- | -- |
| 322.85 | 0.842 | 3.43 | 1.31 | 0.419 | -- | 0.278 | -- | 0.2 | 7.28 | -- | -- | -- | -- |
| 323.06 | 0.842 | 3.43 | 1.32 | 0.419 | -- | -- | -- | 0.199 | 7.3 | -- | -- | -- | -- |
| 288.47 | 0.791 | 3.38 | 1.69 | -- | -1.35 | -- | -- | 0.448 | -- | 19.3 | 679 | -- | -- |
| 355.72 | 0.878 | 3.44 | -- | 0.195 | -0.776 | -- | -- | 0.15 | 5.43 | 21.11 | 692 | -- | -- |
| 332.38 | 0.852 | 3.44 | 1.33 | -- | -- | -- | -- | 0.206 | -- | -- | -- | -- | -- |
| 369.03 | 0.899 | 3.46 | -- | 0.433 | -- | -- | -- | 0.0522 | 7.1 | -- | -- | -- | -- |
| 356.86 | 0.88 | 3.44 | -- | -- | -0.885 | -- | -- | 0.186 | -- | 21.2 | 611 | -- | -- |
| 378.9 | 0.909 | 3.47 | -- | -- | -- | -- | -- | 0.059 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 282.38 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 2 | 283.07 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 4 | 283.44 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 20 | 1 |
| 8 | 283.83 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 18 | 3 |
| 9 | 283.84 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 20 | 1 |
| 18 | 284.12 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 6 |
| 27 | 284.35 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 18 | 8 |
| 31 | 284.43 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 5 |
| 58 | 284.89 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 20 | 1 |
| 78 | 285.09 | wind | 7.0 | 4320 | < th | dose independent | rect. | 19 | 8 |
| 86 | 285.15 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 19 | 8 |
| 94 | 285.23 | wind | 7.0 | 4320 | > th | dose independent | rect. | 19 | 8 |
| 99 | 285.32 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 112 | 285.48 | temperature | 20.0 | 1440 | > th | dose dependent | sin | 11 | NA |
| 114 | 285.50 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 133 | 285.65 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 8 |
| 150 | 285.83 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 14 | 21 |
| 167 | 286.07 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 12 |
| 207 | 286.34 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 4 |
| 239 | 286.60 | wind | 5.0 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 303 | 287.04 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 19 | 3 |
| 306 | 287.05 | wind | 7.0 | 4320 | > th | dose independent | rect. | 19 | 3 |
| 311 | 287.09 | wind | 7.0 | 4320 | < th | dose independent | rect. | 19 | 3 |
| 350 | 287.30 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 14 | 21 |
| 369 | 287.44 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 7 |
| 370 | 287.44 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 18 | 23 |
| 397 | 287.59 | wind | 5.0 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 432 | 287.76 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 20 | 23 |
| 439 | 287.81 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 445 | 287.83 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 454 | 287.86 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 455 | 287.86 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 491 | 288.03 | temperature | 20.0 | 720 | > th | dose dependent | no | NA | NA |
| 494 | 288.03 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 2 | 22 |
| 495 | 288.04 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 7 | 23 |
| 497 | 288.05 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 22 | 23 |
| 542 | 288.19 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 14 | 23 |
| 555 | 288.22 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 15 | 23 |
| 559 | 288.23 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 5 | 23 |
| 581 | 288.29 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 12 | 23 |
| 585 | 288.30 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 9 | 22 |
| 589 | 288.31 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 599 | 288.32 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 6 | 23 |
| 605 | 288.34 | temperature | 30.0 | 1440 | < th | dose dependent | sin | 15 | NA |
| 609 | 288.34 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 16 | 19 |
| 643 | 288.41 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 652 | 288.42 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 708 | 288.54 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 12 |
| 709 | 288.54 | temperature | 30.0 | 720 | < th | dose dependent | no | NA | NA |
| 751 | 288.62 | wind | 7.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 754 | 288.62 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 784 | 288.67 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 788 | 288.67 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 827 | 288.78 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 7 |
| 872 | 288.89 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 889 | 288.91 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 7 | 23 |
| 969 | 289.07 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 20 | 23 |