Os09g0569700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os09g0569700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 118.29 | 0.511 | 6.83 | 0.201 | 1.5 | 0.783 | -1.44 | 1.72 | 0.348 | 21.8 | 3 | 1 | -- | -- |
| 128.85 | 0.529 | 6.85 | 0.277 | 1.57 | 1.04 | -0.407 | -- | 0.297 | 22 | 47.98 | 10 | -- | -- |
| 127.49 | 0.526 | 6.85 | 0.32 | 1.54 | 1.02 | -- | 1.22 | 0.301 | 22.2 | 11.33 | 5 | -- | -- |
| 128.39 | 0.528 | 6.83 | 0.323 | 1.51 | 0.807 | -- | -- | 0.364 | 21.9 | 69.3 | 10 | -- | -- |
| 246.11 | 0.735 | 6.8 | 0.314 | -- | 1.68 | -- | 0.901 | 0.317 | -- | 50.49 | 2 | -- | -- |
| 143.59 | 0.562 | 6.85 | 0.326 | 1.84 | -- | -0.0732 | -- | 0.283 | 23.2 | -- | -- | -- | -- |
| 143.61 | 0.561 | 6.85 | 0.329 | 1.84 | -- | -- | -- | 0.283 | 23.2 | -- | -- | -- | -- |
| 243.29 | 0.73 | 6.79 | 0.322 | -- | 1.42 | -- | -- | 0.379 | -- | 64 | 3 | -- | -- |
| 131.21 | 0.533 | 6.84 | -- | 1.51 | 0.799 | -- | -- | 0.329 | 22 | 70 | 10 | -- | -- |
| 356.27 | 0.882 | 6.81 | 0.374 | -- | -- | -- | -- | 0.299 | -- | -- | -- | -- | -- |
| 146.47 | 0.566 | 6.86 | -- | 1.85 | -- | -- | -- | 0.246 | 23.2 | -- | -- | -- | -- |
| 246.03 | 0.733 | 6.8 | -- | -- | 1.43 | -- | -- | 0.344 | -- | 64 | 2 | -- | -- |
| 359.96 | 0.886 | 6.82 | -- | -- | -- | -- | -- | 0.258 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 117.01 | temperature | 30.0 | 270 | < th | dose independent | rect. | 14 | 15 |
| 2 | 117.13 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 14 | 22 |
| 5 | 117.40 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 9 | 23 |
| 14 | 117.66 | humidity | 70.0 | 90 | > th | dose independent | rect. | 15 | 16 |
| 21 | 117.86 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 31 | 118.19 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 38 | 118.29 | humidity | 70.0 | 10 | > th | dose dependent | no | NA | NA |
| 40 | 118.33 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 46 | 118.51 | temperature | 30.0 | 270 | < th | dose independent | rect. | 10 | 9 |
| 51 | 118.60 | humidity | 70.0 | 90 | > th | dose independent | rect. | 13 | 18 |
| 54 | 118.62 | humidity | 70.0 | 90 | > th | dose independent | rect. | 17 | 14 |
| 86 | 119.42 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 96 | 119.63 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 98 | 119.70 | temperature | 30.0 | 270 | < th | dose independent | rect. | 11 | 19 |
| 100 | 119.74 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 3 | 20 |
| 106 | 119.83 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 108 | 119.86 | temperature | 30.0 | 270 | < th | dose independent | rect. | 1 | 18 |
| 112 | 119.91 | wind | 1.0 | 14400 | > th | dose independent | rect. | 1 | 2 |
| 122 | 120.08 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 4 | 17 |
| 136 | 120.21 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 3 | 18 |
| 139 | 120.27 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 19 | 23 |
| 144 | 120.31 | temperature | 30.0 | 270 | < th | dose independent | rect. | 9 | 21 |
| 186 | 120.85 | wind | 1.0 | 14400 | < th | dose independent | rect. | 1 | 2 |
| 189 | 120.87 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 14 | 15 |
| 215 | 121.10 | humidity | 80.0 | 10 | < th | dose independent | rect. | 6 | 15 |
| 266 | 121.45 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 11 | 19 |
| 305 | 121.82 | humidity | 90.0 | 90 | > th | dose independent | rect. | 3 | 18 |
| 306 | 121.82 | temperature | 30.0 | 270 | < th | dose independent | rect. | 24 | 21 |
| 307 | 121.84 | humidity | 80.0 | 10 | > th | dose dependent | sin | 1 | NA |
| 317 | 121.89 | wind | 1.0 | 14400 | > th | dose independent | rect. | 24 | 5 |
| 326 | 121.93 | humidity | 80.0 | 10 | > th | dose independent | rect. | 4 | 8 |
| 329 | 121.95 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 3 |
| 333 | 121.96 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 5 |
| 342 | 122.01 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 5 |
| 343 | 122.01 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 5 |
| 345 | 122.01 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 5 |
| 346 | 122.01 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 7 |
| 348 | 122.02 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 5 |
| 349 | 122.02 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 5 |
| 354 | 122.05 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 3 |
| 357 | 122.05 | radiation | 1.0 | 270 | < th | dose independent | rect. | 24 | 23 |
| 358 | 122.05 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 3 |
| 364 | 122.07 | wind | 1.0 | 14400 | > th | dose independent | rect. | 1 | 7 |
| 392 | 122.17 | wind | 1.0 | 14400 | > th | dose independent | rect. | 1 | 9 |
| 414 | 122.25 | humidity | 90.0 | 10 | > th | dose independent | rect. | 4 | 18 |
| 422 | 122.27 | humidity | 80.0 | 10 | > th | dose independent | rect. | 4 | 16 |
| 431 | 122.28 | humidity | 90.0 | 30 | > th | dose dependent | sin | 23 | NA |
| 439 | 122.31 | wind | 1.0 | 14400 | < th | dose independent | rect. | 1 | 6 |
| 471 | 122.44 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 6 |
| 495 | 122.51 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 7 | 20 |
| 516 | 122.61 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 13 |
| 525 | 122.64 | radiation | 30.0 | 720 | < th | dose independent | rect. | 17 | 18 |
| 536 | 122.67 | temperature | 30.0 | 720 | < th | dose independent | rect. | 9 | 4 |
| 542 | 122.68 | humidity | 90.0 | 90 | < th | dose independent | sin | 0 | NA |
| 548 | 122.69 | temperature | 30.0 | 720 | < th | dose independent | rect. | 2 | 10 |
| 556 | 122.70 | wind | 1.0 | 14400 | < th | dose independent | rect. | 1 | 4 |
| 579 | 122.75 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 4 | 8 |
| 588 | 122.76 | radiation | 40.0 | 720 | < th | dose dependent | rect. | 17 | 15 |
| 595 | 122.79 | radiation | 30.0 | 720 | > th | dose dependent | rect. | 15 | 18 |
| 625 | 122.87 | humidity | 80.0 | 30 | < th | dose independent | rect. | 19 | 23 |
| 626 | 122.87 | radiation | 1.0 | 270 | > th | dose independent | rect. | 16 | 23 |
| 637 | 122.89 | radiation | 20.0 | 720 | < th | dose independent | rect. | 17 | 15 |
| 647 | 122.92 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 6 | 22 |
| 677 | 122.99 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 3 | 10 |
| 707 | 123.05 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 15 | 17 |
| 710 | 123.06 | radiation | 20.0 | 30 | < th | dose independent | sin | 9 | NA |
| 711 | 123.06 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 15 | 2 |
| 717 | 123.08 | humidity | 80.0 | 10 | > th | dose independent | rect. | 4 | 14 |
| 722 | 123.09 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 1 | 7 |
| 732 | 123.10 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 8 |
| 748 | 123.15 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 750 | 123.15 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 3 | 16 |
| 785 | 123.23 | humidity | 60.0 | 720 | > th | dose independent | rect. | 11 | 2 |
| 803 | 123.26 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 0 | NA |
| 819 | 123.29 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 4 | 4 |
| 839 | 123.33 | radiation | 40.0 | 30 | < th | dose dependent | sin | 6 | NA |
| 883 | 123.40 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 15 | 16 |
| 884 | 123.40 | humidity | 80.0 | 10 | > th | dose independent | rect. | 14 | 22 |
| 898 | 123.42 | humidity | 80.0 | 10 | > th | dose independent | rect. | 16 | 20 |
| 905 | 123.43 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 1 | 18 |
| 906 | 123.43 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 24 | 21 |
| 923 | 123.45 | humidity | 80.0 | 10 | > th | dose independent | sin | 3 | NA |
| 932 | 123.47 | humidity | 80.0 | 10 | < th | dose independent | rect. | 24 | 21 |
| 960 | 123.51 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 12 | 3 |
| 970 | 123.52 | radiation | 30.0 | 720 | > th | dose independent | rect. | 15 | 18 |
| 984 | 123.55 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 11 | 20 |