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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os09g0567800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Lipolytic enzyme, G-D-S-L family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.38 (0.0254) R2 : 0.000605
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0281 (0.0535) R2dN8 : 0.000781 R2N8 : 0.000605
σ : 0.478
deviance : 105.08
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
94.29 0.456 3.28 1.09 0.0947 1.09 -0.00896 -8.24 0.082 13.1 29.83 340 -- --
101.1 0.472 3.37 0.318 0.0925 0.078 -0.564 -- 0.000319 6.56 29.83 340 -- --
94.27 0.452 3.28 1.09 0.0942 1.1 -- -8.31 0.0821 13.2 29.84 348 -- --
100.09 0.466 3.36 0.365 0.0315 0.314 -- -- 0.0302 18.4 28.7 677 -- --
94.79 0.453 3.28 1.06 -- 1.04 -- -8.06 0.0788 -- 29.84 348 -- --
101.34 0.472 3.37 0.309 0.106 -- -0.543 -- 0.0018 6.48 -- -- -- --
101.96 0.473 3.37 0.303 0.111 -- -- -- 0.00423 7.97 -- -- -- --
99.34 0.464 3.34 0.452 -- 0.298 -- -- 0.112 -- 23.58 5247 -- --
103.35 0.473 3.37 -- 0.0113 0.224 -- -- -0.00818 7.55 28.7 677 -- --
102.64 0.473 3.37 0.304 -- -- -- -- 0.00567 -- -- -- -- --
104.39 0.478 3.37 -- 0.113 -- -- -- -0.0296 7.77 -- -- -- --
103.35 0.473 3.37 -- -- 0.158 -- -- 0.0171 -- 30.41 9084 -- --
105.08 0.478 3.38 -- -- -- -- -- -0.0281 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 86.97 wind 1.0 30 < th dose independent rect. 17 1
3 86.97 humidity 70.0 90 < th dose independent rect. 17 1
10 86.97 humidity 70.0 30 < th dose independent rect. 17 3
25 86.97 wind 1.0 30 < th dose dependent rect. 17 1
37 87.21 humidity 70.0 90 < th dose dependent rect. 17 2
186 92.67 humidity 50.0 270 < th dose dependent rect. 14 4
203 92.68 humidity 50.0 270 < th dose dependent rect. 14 2
206 92.72 humidity 50.0 270 < th dose independent rect. 14 4
224 92.74 radiation 10.0 43200 < th dose dependent rect. 23 1
226 92.82 wind 1.0 10 < th dose independent rect. 14 4
252 93.08 humidity 50.0 270 < th dose dependent sin 12 NA
296 93.26 humidity 50.0 270 < th dose independent sin 12 NA
323 94.16 humidity 50.0 270 > th dose independent sin 12 NA
327 94.19 temperature 25.0 720 > th dose independent rect. 3 8
328 94.20 wind 5.0 14400 < th dose independent rect. 11 1
329 94.21 temperature 10.0 720 > th dose independent rect. 3 8
330 94.21 atmosphere 995.0 720 > th dose independent rect. 3 8
331 94.21 temperature 10.0 720 > th dose independent rect. 11 16
332 94.22 temperature 10.0 720 > th dose independent rect. 15 8
333 94.22 temperature 10.0 720 > th dose independent rect. 23 16
354 94.25 humidity 50.0 720 > th dose independent rect. 3 8
359 94.29 temperature 30.0 720 < th dose independent rect. 15 8
361 94.34 temperature 30.0 270 > th dose independent rect. 15 1
363 94.36 wind 5.0 14400 > th dose independent rect. 11 1
382 94.38 wind 9.0 720 < th dose independent rect. 3 8
387 94.44 atmosphere 995.0 720 > th dose independent rect. 23 16
393 94.53 temperature 25.0 720 > th dose dependent rect. 22 13
396 94.58 temperature 25.0 720 < th dose independent rect. 2 9
398 94.59 temperature 25.0 270 > th dose dependent rect. 13 22
399 94.63 temperature 25.0 270 > th dose dependent rect. 4 15
418 94.79 temperature 25.0 720 > th dose independent rect. 8 3
424 94.82 wind 3.0 270 < th dose dependent rect. 14 4
425 94.83 temperature 30.0 270 > th dose independent rect. 14 20
430 94.86 wind 3.0 14400 > th dose dependent rect. 11 1
434 94.88 temperature 25.0 720 > th dose dependent rect. 2 9
448 94.93 humidity 50.0 720 > th dose independent rect. 23 16
454 94.95 temperature 25.0 90 > th dose independent rect. 17 1
488 95.04 atmosphere 995.0 720 > th dose independent rect. 11 16
495 95.09 precipitation 0.1 720 < th dose independent rect. 15 8
496 95.09 precipitation 0.1 720 < th dose dependent rect. 15 8
499 95.11 temperature 30.0 270 < th dose independent sin 15 NA
506 95.13 atmosphere 1015.0 720 < th dose independent rect. 3 8
510 95.18 atmosphere 995.0 720 > th dose independent rect. 15 8
525 95.24 precipitation 0.1 1440 < th dose independent rect. 23 1
527 95.24 precipitation 0.1 1440 < th dose dependent rect. 23 1
528 95.24 temperature 25.0 720 > th dose dependent rect. 8 3
532 95.26 precipitation 0.1 720 < th dose independent rect. 23 16
533 95.26 temperature 25.0 720 > th dose dependent rect. 10 1
535 95.26 precipitation 0.1 720 < th dose dependent rect. 23 16
537 95.28 temperature 30.0 1440 < th dose independent rect. 14 21
554 95.35 precipitation 0.1 720 < th dose independent rect. 3 8
556 95.35 precipitation 0.1 720 < th dose dependent rect. 3 8
570 95.40 temperature 25.0 720 > th dose dependent sin 7 NA
571 95.40 wind 7.0 14400 < th dose dependent rect. 11 1
575 95.41 temperature 30.0 1440 > th dose independent rect. 14 21
581 95.43 temperature 25.0 270 > th dose dependent sin 21 NA
587 95.44 temperature 30.0 1440 < th dose independent rect. 14 10
588 95.44 temperature 30.0 1440 < th dose independent rect. 14 15
596 95.46 temperature 30.0 1440 < th dose independent rect. 14 5
617 95.50 temperature 30.0 270 > th dose independent rect. 14 23
620 95.50 temperature 25.0 270 > th dose dependent rect. 14 4
625 95.51 temperature 30.0 270 < th dose independent rect. 18 23
630 95.52 temperature 30.0 270 > th dose independent sin 16 NA
640 95.54 wind 3.0 43200 < th dose dependent rect. 9 1
664 95.59 temperature 30.0 1440 > th dose independent rect. 14 5
747 95.68 temperature 25.0 270 > th dose dependent no NA NA
751 95.68 temperature 10.0 30 > th dose dependent rect. 23 23
778 95.71 wind 5.0 43200 < th dose dependent rect. 20 1
796 95.72 temperature 30.0 1440 < th dose independent rect. 18 22
814 95.75 temperature 30.0 1440 < th dose independent rect. 23 17
816 95.75 temperature 30.0 1440 < th dose independent rect. 21 19
824 95.76 temperature 30.0 1440 < th dose independent rect. 8 8
849 95.77 temperature 25.0 720 > th dose independent sin 5 NA
873 95.79 temperature 30.0 1440 < th dose independent sin 16 NA
891 95.81 temperature 25.0 270 > th dose dependent rect. 8 23
903 95.84 temperature 30.0 270 < th dose independent no NA NA
928 95.86 wind 1.0 43200 > th dose dependent rect. 20 1
948 95.89 temperature 25.0 1440 > th dose dependent rect. 12 1
962 95.92 temperature 30.0 1440 < th dose independent rect. 3 21
969 95.93 temperature 30.0 1440 < th dose independent rect. 9 15
974 95.93 temperature 30.0 1440 < th dose independent rect. 3 19
975 95.93 temperature 30.0 1440 < th dose independent rect. 9 19
989 95.94 temperature 30.0 1440 < th dose independent no NA NA
994 95.94 temperature 30.0 1440 < th dose independent rect. 9 13