Os09g0567100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os09g0567100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 48.37 | 0.327 | 3.09 | -0.0998 | 0.0766 | 7.28 | 0.16 | -26.1 | 0.0301 | 10.3 | 1.5 | 179 | -- | -- |
| 51.59 | 0.335 | 3.09 | -0.0406 | 0.0343 | 1.77 | -0.628 | -- | -0.0274 | 5.27 | 1.516 | 275 | -- | -- |
| 48.46 | 0.324 | 3.09 | -0.0975 | 0.0784 | 7.41 | -- | -26.8 | 0.03 | 9.43 | 1.501 | 189 | -- | -- |
| 49.38 | 0.327 | 3.05 | 0.0651 | 0.0824 | 1.33 | -- | -- | 0.0297 | 9.28 | 1.545 | 275 | -- | -- |
| 48.81 | 0.325 | 3.1 | -0.102 | -- | 7.57 | -- | -27.7 | 0.0299 | -- | 1.511 | 202 | -- | -- |
| 53.45 | 0.343 | 3.06 | 0.0875 | 0.0493 | -- | 0.195 | -- | 0.0238 | 13 | -- | -- | -- | -- |
| 53.56 | 0.343 | 3.05 | 0.0938 | 0.0575 | -- | -- | -- | 0.0242 | 10.7 | -- | -- | -- | -- |
| 49.78 | 0.329 | 3.05 | 0.0625 | -- | 1.3 | -- | -- | 0.031 | -- | 1.5 | 269 | -- | -- |
| 49.46 | 0.328 | 3.05 | -- | 0.0857 | 1.36 | -- | -- | 0.0242 | 9.4 | 1.5 | 270 | -- | -- |
| 53.76 | 0.343 | 3.06 | 0.0927 | -- | -- | -- | -- | 0.0239 | -- | -- | -- | -- | -- |
| 53.79 | 0.343 | 3.06 | -- | 0.0568 | -- | -- | -- | 0.0137 | 10.6 | -- | -- | -- | -- |
| 49.88 | 0.329 | 3.06 | -- | -- | 1.31 | -- | -- | 0.0243 | -- | 1.5 | 275 | -- | -- |
| 53.99 | 0.343 | 3.06 | -- | -- | -- | -- | -- | 0.0136 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 47.29 | atmosphere | 1005.0 | 10 | < th | dose independent | rect. | 20 | 1 |
| 4 | 47.91 | wind | 3.0 | 10 | < th | dose independent | rect. | 20 | 1 |
| 8 | 48.27 | atmosphere | 1000.0 | 270 | < th | dose independent | rect. | 16 | 1 |
| 11 | 48.31 | atmosphere | 1000.0 | 270 | < th | dose dependent | rect. | 16 | 1 |
| 14 | 48.37 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 16 | 1 |
| 16 | 48.37 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 16 | 1 |
| 19 | 48.40 | temperature | 20.0 | 10 | < th | dose independent | rect. | 19 | 1 |
| 25 | 48.40 | temperature | 20.0 | 10 | < th | dose independent | rect. | 15 | 5 |
| 37 | 48.42 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 18 | 1 |
| 42 | 48.44 | temperature | 20.0 | 10 | < th | dose independent | rect. | 9 | 12 |
| 55 | 48.50 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 16 | 3 |
| 65 | 48.72 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 19 | 1 |
| 107 | 49.85 | radiation | 10.0 | 10 | > th | dose independent | rect. | 6 | 1 |
| 133 | 49.85 | radiation | 10.0 | 10 | > th | dose dependent | rect. | 6 | 1 |
| 170 | 50.06 | wind | 3.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 173 | 50.11 | atmosphere | 1010.0 | 10 | < th | dose dependent | rect. | 20 | 1 |
| 175 | 50.13 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 19 | 5 |
| 179 | 50.21 | precipitation | 0.1 | 270 | > th | dose dependent | sin | 20 | NA |
| 196 | 50.39 | humidity | 70.0 | 30 | > th | dose independent | rect. | 19 | 2 |
| 199 | 50.39 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 18 | 1 |
| 208 | 50.46 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 19 | 2 |
| 221 | 50.50 | humidity | 90.0 | 90 | < th | dose independent | rect. | 19 | 2 |
| 247 | 50.57 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 20 | 2 |
| 249 | 50.58 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 20 | 2 |
| 252 | 50.58 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 20 | 2 |
| 256 | 50.58 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 20 | 2 |
| 262 | 50.58 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 20 | 2 |
| 263 | 50.58 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 20 | 2 |
| 283 | 50.58 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 22 | 22 |
| 297 | 50.59 | radiation | 30.0 | 43200 | < th | dose dependent | rect. | 20 | 2 |
| 309 | 50.63 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 8 | 10 |
| 387 | 50.90 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 21 | 22 |
| 390 | 50.92 | temperature | 20.0 | 10 | > th | dose independent | sin | 21 | NA |
| 408 | 50.96 | humidity | 60.0 | 30 | > th | dose dependent | rect. | 19 | 2 |
| 417 | 50.99 | wind | 3.0 | 30 | < th | dose dependent | rect. | 6 | 1 |
| 430 | 51.01 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 19 | 9 |
| 437 | 51.03 | temperature | 20.0 | 10 | < th | dose independent | sin | 21 | NA |
| 457 | 51.10 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 6 | 1 |
| 477 | 51.13 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 19 | 2 |
| 478 | 51.13 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 19 | 2 |
| 480 | 51.14 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 19 | 2 |
| 483 | 51.15 | wind | 1.0 | 90 | > th | dose independent | rect. | 19 | 2 |
| 500 | 51.19 | wind | 9.0 | 90 | < th | dose independent | rect. | 21 | 22 |
| 502 | 51.20 | temperature | 10.0 | 90 | > th | dose independent | rect. | 19 | 2 |
| 504 | 51.20 | temperature | 30.0 | 90 | < th | dose independent | rect. | 19 | 2 |
| 505 | 51.20 | humidity | 50.0 | 90 | > th | dose independent | rect. | 19 | 2 |
| 510 | 51.20 | radiation | 1.0 | 90 | < th | dose independent | rect. | 19 | 2 |
| 521 | 51.20 | temperature | 10.0 | 90 | > th | dose independent | rect. | 21 | 22 |
| 523 | 51.20 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 19 | 2 |
| 553 | 51.25 | humidity | 90.0 | 30 | < th | dose independent | rect. | 19 | 4 |
| 569 | 51.28 | humidity | 80.0 | 30 | > th | dose dependent | rect. | 6 | 1 |
| 585 | 51.30 | wind | 5.0 | 30 | < th | dose independent | rect. | 19 | 13 |
| 676 | 51.41 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 21 | 22 |
| 678 | 51.41 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 21 | 22 |
| 717 | 51.45 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 9 | 11 |
| 720 | 51.45 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 20 | 13 |
| 723 | 51.45 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 20 | 13 |
| 725 | 51.45 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 20 | 13 |
| 739 | 51.46 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 6 | 1 |
| 807 | 51.51 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 8 | 11 |
| 812 | 51.52 | wind | 1.0 | 30 | < th | dose independent | rect. | 10 | 1 |
| 813 | 51.52 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 817 | 51.52 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 820 | 51.52 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 825 | 51.52 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 12 | 23 |
| 829 | 51.52 | wind | 1.0 | 30 | < th | dose dependent | rect. | 10 | 1 |
| 830 | 51.52 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 891 | 51.58 | precipitation | 0.1 | 270 | > th | dose dependent | no | NA | NA |
| 892 | 51.58 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 16 | 4 |
| 905 | 51.60 | radiation | 40.0 | 30 | < th | dose independent | rect. | 10 | 1 |
| 907 | 51.60 | radiation | 10.0 | 270 | < th | dose independent | rect. | 16 | 4 |
| 910 | 51.61 | humidity | 70.0 | 30 | < th | dose independent | rect. | 10 | 1 |
| 911 | 51.61 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 10 | 1 |
| 925 | 51.63 | atmosphere | 1000.0 | 720 | > th | dose independent | rect. | 11 | 6 |
| 929 | 51.63 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 19 | 2 |
| 933 | 51.64 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 10 | 1 |
| 935 | 51.64 | humidity | 70.0 | 30 | > th | dose independent | rect. | 19 | 13 |
| 936 | 51.64 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 10 | 1 |
| 946 | 51.65 | atmosphere | 1000.0 | 30 | > th | dose dependent | rect. | 10 | 1 |
| 957 | 51.66 | atmosphere | 1000.0 | 720 | < th | dose dependent | rect. | 8 | 7 |
| 969 | 51.68 | wind | 3.0 | 30 | < th | dose independent | rect. | 6 | 1 |
| 977 | 51.69 | precipitation | 0.1 | 270 | > th | dose independent | sin | 20 | NA |
| 978 | 51.69 | temperature | 30.0 | 30 | < th | dose independent | rect. | 10 | 1 |
| 979 | 51.69 | radiation | 10.0 | 30 | > th | dose independent | rect. | 10 | 1 |
| 982 | 51.69 | radiation | 10.0 | 30 | < th | dose independent | rect. | 21 | 22 |
| 983 | 51.69 | humidity | 70.0 | 30 | < th | dose dependent | rect. | 10 | 1 |
| 987 | 51.70 | temperature | 20.0 | 30 | > th | dose independent | rect. | 10 | 1 |
| 993 | 51.70 | wind | 9.0 | 10 | < th | dose dependent | rect. | 19 | 13 |
| 997 | 51.71 | atmosphere | 1000.0 | 720 | > th | dose independent | rect. | 12 | 3 |
| 998 | 51.71 | humidity | 70.0 | 270 | > th | dose independent | rect. | 16 | 4 |