Os09g0566400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1618 domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os09g0566400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function DUF1618 domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 32.05 | 0.266 | 9.35 | 1.31 | 0.498 | -0.658 | -0.458 | -1.92 | 0.179 | 23.4 | 27.59 | 291 | -- | -- |
| 35.6 | 0.278 | 9.38 | 0.934 | 0.385 | -0.737 | -0.677 | -- | 0.113 | 23.7 | 37.65 | 526 | -- | -- |
| 32.82 | 0.267 | 9.35 | 1.35 | 0.527 | -0.65 | -- | -2.09 | 0.192 | 23.4 | 27.67 | 238 | -- | -- |
| 37.48 | 0.285 | 9.38 | 0.973 | 0.442 | -0.66 | -- | -- | 0.103 | 23.5 | 31.54 | 416 | -- | -- |
| 43.19 | 0.306 | 9.36 | 1.13 | -- | -0.915 | -- | -1.23 | 0.127 | -- | 31.3 | 720 | -- | -- |
| 42.12 | 0.304 | 9.36 | 1.11 | 0.489 | -- | -0.557 | -- | 0.226 | 22.3 | -- | -- | -- | -- |
| 43.3 | 0.308 | 9.36 | 1.13 | 0.496 | -- | -- | -- | 0.228 | 22 | -- | -- | -- | -- |
| 44.45 | 0.311 | 9.38 | 0.902 | -- | -0.932 | -- | -- | 0.0859 | -- | 35.71 | 748 | -- | -- |
| 59.52 | 0.359 | 9.41 | -- | 0.281 | -1.09 | -- | -- | -0.0379 | 22.9 | 37.42 | 788 | -- | -- |
| 58.11 | 0.356 | 9.35 | 1.14 | -- | -- | -- | -- | 0.228 | -- | -- | -- | -- | -- |
| 77.14 | 0.411 | 9.39 | -- | 0.501 | -- | -- | -- | 0.102 | 22.2 | -- | -- | -- | -- |
| 63.4 | 0.371 | 9.42 | -- | -- | -1.25 | -- | -- | -0.075 | -- | 31.09 | 790 | -- | -- |
| 92.35 | 0.449 | 9.38 | -- | -- | -- | -- | -- | 0.102 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 31.61 | temperature | 25 | 720 | < th | dose dependent | rect. | 8 | 19 |
| 18 | 32.03 | temperature | 30 | 270 | < th | dose dependent | rect. | 13 | 22 |
| 21 | 32.09 | temperature | 25 | 270 | < th | dose dependent | rect. | 6 | 23 |
| 25 | 32.10 | temperature | 25 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 30 | 32.15 | temperature | 25 | 270 | < th | dose dependent | rect. | 3 | 23 |
| 38 | 32.18 | temperature | 30 | 270 | < th | dose dependent | rect. | 10 | 23 |
| 40 | 32.20 | temperature | 25 | 720 | < th | dose dependent | sin | 19 | NA |
| 41 | 32.21 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 55 | 32.31 | temperature | 25 | 270 | < th | dose dependent | rect. | 21 | 23 |
| 89 | 32.45 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 157 | 32.74 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 168 | 32.77 | temperature | 15 | 270 | > th | dose dependent | rect. | 15 | 23 |
| 208 | 32.88 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 23 |
| 231 | 32.94 | temperature | 10 | 270 | > th | dose dependent | no | NA | NA |
| 304 | 33.08 | temperature | 15 | 270 | > th | dose dependent | rect. | 6 | 23 |
| 312 | 33.10 | temperature | 15 | 720 | > th | dose dependent | rect. | 8 | 23 |
| 330 | 33.14 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 6 |
| 352 | 33.17 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 392 | 33.22 | temperature | 15 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 403 | 33.23 | temperature | 15 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 478 | 33.31 | temperature | 10 | 30 | > th | dose dependent | rect. | 21 | 23 |
| 582 | 33.40 | temperature | 10 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 603 | 33.43 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 2 |
| 705 | 33.52 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 18 |
| 913 | 33.72 | temperature | 15 | 30 | > th | dose dependent | rect. | 1 | 23 |
| 993 | 33.80 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 2 |