Os09g0566300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os09g0566300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 124.24 | 0.524 | 3.33 | 1.45 | 0.146 | -73.1 | 0.851 | -151 | 0.0371 | 7.52 | 2 | 3 | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 128.67 | 0.532 | 2.71 | 0.0721 | 0.13 | -- | 0.949 | -- | 0.0207 | 7.87 | -- | -- | -- | -- |
| 131.11 | 0.536 | 2.71 | 0.095 | 0.146 | -- | -- | -- | 0.0183 | 6.37 | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 132.21 | 0.537 | 2.72 | 0.0988 | -- | -- | -- | -- | 0.0214 | -- | -- | -- | -- | -- |
| 131.34 | 0.536 | 2.72 | -- | 0.147 | -- | -- | -- | 0.00775 | 6.34 | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 132.47 | 0.537 | 2.72 | -- | -- | -- | -- | -- | 0.0105 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 112.93 | wind | 3.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 2 | 112.93 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 4 | 112.94 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 10 | 113.02 | temperature | 20.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 11 | 113.03 | wind | 3.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 13 | 113.04 | humidity | 80.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 16 | 113.06 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 17 | 113.08 | temperature | 25.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 18 | 113.08 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 20 | 113.09 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 23 | 113.09 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 26 | 113.09 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 27 | 113.09 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 29 | 113.09 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 34 | 113.09 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 35 | 113.09 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 37 | 113.09 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 42 | 113.09 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 46 | 113.18 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 49 | 113.39 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 51 | 113.74 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 61 | 114.41 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 111 | 116.08 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 112 | 116.08 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 115 | 116.08 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 119 | 116.08 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 128 | 116.08 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 129 | 116.08 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 149 | 116.08 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 152 | 116.08 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 165 | 117.33 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 6 | 6 |
| 169 | 117.35 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 171 | 117.39 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 6 | 4 |
| 173 | 117.42 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 6 | 2 |
| 176 | 117.53 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 181 | 117.79 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 5 | 4 |
| 185 | 118.22 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 5 | 1 |
| 190 | 118.64 | temperature | 20.0 | 10 | < th | dose independent | rect. | 6 | 2 |
| 192 | 118.68 | temperature | 20.0 | 10 | < th | dose independent | rect. | 6 | 6 |
| 198 | 118.73 | wind | 1.0 | 90 | < th | dose dependent | rect. | 8 | 1 |
| 199 | 118.74 | temperature | 20.0 | 10 | < th | dose independent | rect. | 6 | 4 |
| 201 | 118.75 | wind | 1.0 | 90 | < th | dose independent | rect. | 8 | 1 |
| 202 | 118.77 | temperature | 20.0 | 270 | < th | dose independent | rect. | 5 | 1 |
| 204 | 118.78 | humidity | 80.0 | 270 | < th | dose independent | rect. | 4 | 2 |
| 208 | 118.79 | humidity | 80.0 | 270 | < th | dose dependent | rect. | 4 | 2 |
| 229 | 119.31 | wind | 3.0 | 90 | > th | dose dependent | rect. | 5 | 2 |
| 230 | 119.34 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 23 |
| 231 | 119.34 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 237 | 119.59 | temperature | 20.0 | 270 | < th | dose independent | rect. | 4 | 4 |
| 240 | 119.61 | temperature | 20.0 | 90 | < th | dose independent | rect. | 5 | 7 |
| 245 | 119.65 | radiation | 10.0 | 10 | < th | dose independent | rect. | 8 | 1 |
| 268 | 119.84 | wind | 1.0 | 10 | > th | dose dependent | rect. | 5 | 3 |
| 277 | 119.95 | wind | 3.0 | 90 | > th | dose independent | rect. | 6 | 1 |
| 286 | 120.14 | wind | 3.0 | 30 | > th | dose independent | rect. | 5 | 3 |
| 293 | 120.22 | wind | 5.0 | 10 | > th | dose independent | rect. | 8 | 1 |
| 295 | 120.22 | wind | 5.0 | 10 | > th | dose dependent | rect. | 8 | 1 |
| 316 | 120.38 | temperature | 20.0 | 30 | > th | dose independent | sin | 0 | NA |
| 331 | 120.43 | temperature | 15.0 | 270 | > th | dose independent | rect. | 12 | 11 |
| 352 | 120.47 | temperature | 20.0 | 10 | < th | dose independent | rect. | 8 | 2 |
| 362 | 120.47 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 8 | 2 |
| 376 | 120.49 | temperature | 20.0 | 30 | < th | dose independent | sin | 0 | NA |
| 378 | 120.50 | temperature | 20.0 | 30 | > th | dose independent | rect. | 3 | 11 |
| 395 | 120.55 | temperature | 20.0 | 270 | < th | dose independent | rect. | 3 | 8 |
| 425 | 120.62 | atmosphere | 1005.0 | 10 | < th | dose independent | rect. | 20 | 1 |
| 478 | 120.91 | temperature | 20.0 | 10 | < th | dose independent | rect. | 4 | 8 |
| 546 | 121.17 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 12 | 3 |
| 569 | 121.26 | humidity | 50.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 574 | 121.30 | temperature | 15.0 | 720 | > th | dose independent | rect. | 12 | 13 |
| 584 | 121.35 | wind | 3.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 602 | 121.46 | temperature | 15.0 | 720 | > th | dose independent | rect. | 20 | 5 |
| 614 | 121.52 | wind | 3.0 | 270 | > th | dose dependent | rect. | 2 | 5 |
| 618 | 121.55 | temperature | 15.0 | 270 | > th | dose independent | rect. | 11 | 23 |
| 622 | 121.57 | wind | 5.0 | 720 | > th | dose independent | rect. | 20 | 1 |
| 623 | 121.57 | temperature | 15.0 | 270 | > th | dose independent | rect. | 20 | 12 |
| 631 | 121.60 | temperature | 15.0 | 720 | > th | dose independent | rect. | 15 | 9 |
| 663 | 121.73 | wind | 1.0 | 10 | > th | dose dependent | rect. | 7 | 1 |
| 672 | 121.80 | wind | 5.0 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 701 | 121.92 | temperature | 20.0 | 270 | > th | dose independent | rect. | 1 | 12 |
| 718 | 121.97 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 20 | 1 |
| 722 | 121.98 | humidity | 80.0 | 720 | > th | dose independent | rect. | 24 | 6 |
| 740 | 122.06 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 5 | 12 |
| 747 | 122.08 | temperature | 15.0 | 720 | > th | dose independent | rect. | 5 | 19 |
| 754 | 122.12 | temperature | 15.0 | 720 | > th | dose independent | rect. | 21 | 2 |
| 755 | 122.12 | radiation | 1.0 | 720 | > th | dose independent | rect. | 13 | 2 |
| 756 | 122.12 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 9 | 6 |
| 760 | 122.12 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 9 | 6 |
| 765 | 122.16 | wind | 7.0 | 720 | > th | dose independent | rect. | 19 | 3 |
| 769 | 122.17 | temperature | 30.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 771 | 122.18 | radiation | 1.0 | 720 | > th | dose independent | rect. | 11 | 4 |
| 772 | 122.18 | wind | 5.0 | 720 | < th | dose independent | rect. | 19 | 9 |
| 783 | 122.20 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 5 | 3 |
| 784 | 122.21 | temperature | 15.0 | 720 | > th | dose independent | rect. | 7 | 17 |
| 793 | 122.23 | radiation | 10.0 | 270 | < th | dose independent | rect. | 5 | 2 |
| 794 | 122.23 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 12 | 3 |
| 798 | 122.23 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 12 | 3 |
| 816 | 122.31 | radiation | 1.0 | 720 | < th | dose independent | rect. | 11 | 2 |
| 819 | 122.31 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 11 | 2 |
| 824 | 122.33 | temperature | 15.0 | 30 | > th | dose independent | rect. | 8 | 23 |
| 842 | 122.37 | wind | 7.0 | 720 | > th | dose dependent | rect. | 19 | 3 |
| 860 | 122.43 | humidity | 90.0 | 720 | > th | dose independent | rect. | 12 | 1 |
| 863 | 122.43 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 12 | 1 |
| 917 | 122.56 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 9 | 6 |
| 919 | 122.56 | wind | 5.0 | 720 | > th | dose dependent | rect. | 19 | 9 |
| 922 | 122.58 | wind | 9.0 | 1440 | < th | dose independent | rect. | 12 | 1 |
| 923 | 122.58 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 7 | 8 |
| 924 | 122.58 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 7 | 8 |
| 940 | 122.62 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 9 | 6 |
| 943 | 122.63 | humidity | 80.0 | 10 | < th | dose independent | rect. | 5 | 3 |
| 945 | 122.63 | temperature | 15.0 | 270 | > th | dose independent | rect. | 17 | 15 |
| 961 | 122.66 | temperature | 15.0 | 90 | > th | dose independent | rect. | 15 | 10 |
| 962 | 122.67 | wind | 5.0 | 720 | > th | dose independent | rect. | 20 | 8 |
| 969 | 122.69 | temperature | 25.0 | 270 | > th | dose independent | rect. | 23 | 4 |
| 972 | 122.69 | wind | 3.0 | 4320 | > th | dose dependent | rect. | 19 | 7 |
| 976 | 122.70 | temperature | 30.0 | 90 | > th | dose dependent | rect. | 8 | 1 |
| 999 | 122.72 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 12 | 3 |