Os09g0565300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Copine domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os09g0565300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Copine domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 264.93 | 0.765 | 9.03 | -2.28 | 0.157 | -0.571 | -1.93 | 4.88 | 0.433 | 16.7 | 0.39 | 4435 | -- | -- |
| 295.93 | 0.801 | 9.04 | -1.24 | 0.113 | -0.913 | -2.62 | -- | 0.64 | 16.4 | 0.36 | 4424 | -- | -- |
| 267.83 | 0.762 | 9.03 | -2.11 | 0.0653 | -0.69 | -- | 5.63 | 0.459 | 14.4 | 0.3617 | 4798 | -- | -- |
| 294.97 | 0.8 | 9.04 | -1.58 | 0.228 | -1.59 | -- | -- | 0.652 | 14.6 | 0.00881 | 4378 | -- | -- |
| 267.94 | 0.762 | 9.03 | -2.17 | -- | -0.664 | -- | 5.61 | 0.458 | -- | 0.36 | 4794 | -- | -- |
| 321.55 | 0.841 | 8.86 | -0.948 | 0.284 | -- | -2.16 | -- | 0.838 | 15.4 | -- | -- | -- | -- |
| 334.14 | 0.856 | 8.86 | -0.988 | 0.318 | -- | -- | -- | 0.824 | 12.9 | -- | -- | -- | -- |
| 295.83 | 0.801 | 9.04 | -1.63 | -- | -1.74 | -- | -- | 0.637 | -- | 2.908e-09 | 4477 | -- | -- |
| 349.56 | 0.871 | 9.01 | -- | 0.104 | -1.1 | -- | -- | 0.618 | 14.3 | 0.18 | 4428 | -- | -- |
| 340.45 | 0.862 | 8.87 | -1 | -- | -- | -- | -- | 0.818 | -- | -- | -- | -- | -- |
| 359.87 | 0.887 | 8.84 | -- | 0.334 | -- | -- | -- | 0.934 | 13.1 | -- | -- | -- | -- |
| 347.4 | 0.868 | 8.96 | -- | -- | -1.22 | -- | -- | 0.799 | -- | 0.2988 | 4587 | -- | -- |
| 366.82 | 0.894 | 8.84 | -- | -- | -- | -- | -- | 0.929 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 257.06 | radiation | 1 | 4320 | < th | dose dependent | rect. | 16 | 2 |
| 2 | 259.05 | radiation | 1 | 4320 | < th | dose dependent | rect. | 12 | 6 |
| 3 | 259.10 | wind | 5 | 14400 | > th | dose independent | rect. | 15 | 2 |
| 4 | 259.16 | radiation | 1 | 4320 | < th | dose dependent | rect. | 12 | 12 |
| 5 | 259.17 | radiation | 1 | 4320 | < th | dose dependent | rect. | 12 | 10 |
| 16 | 259.60 | wind | 5 | 14400 | < th | dose independent | rect. | 15 | 2 |
| 18 | 259.68 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 18 |
| 75 | 260.22 | radiation | 1 | 4320 | < th | dose dependent | sin | 18 | NA |
| 120 | 260.95 | wind | 3 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 142 | 261.29 | radiation | 1 | 720 | < th | dose dependent | rect. | 21 | 22 |
| 220 | 262.98 | radiation | 1 | 4320 | < th | dose independent | rect. | 12 | 12 |
| 221 | 262.99 | radiation | 1 | 4320 | < th | dose independent | rect. | 12 | 7 |
| 222 | 262.99 | radiation | 1 | 4320 | < th | dose independent | rect. | 12 | 9 |
| 225 | 263.00 | radiation | 1 | 4320 | < th | dose independent | rect. | 12 | 14 |
| 226 | 263.00 | radiation | 1 | 4320 | < th | dose independent | rect. | 12 | 16 |
| 234 | 263.23 | radiation | 1 | 4320 | > th | dose independent | rect. | 12 | 7 |
| 308 | 264.06 | radiation | 1 | 4320 | < th | dose independent | sin | 18 | NA |
| 322 | 264.15 | radiation | 1 | 720 | < th | dose dependent | rect. | 5 | 14 |
| 334 | 264.30 | radiation | 1 | 4320 | > th | dose independent | sin | 18 | NA |
| 354 | 264.40 | humidity | 80 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 378 | 264.63 | radiation | 1 | 4320 | < th | dose independent | rect. | 16 | 2 |
| 408 | 264.88 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 462 | 265.21 | radiation | 1 | 720 | < th | dose dependent | rect. | 3 | 15 |
| 465 | 265.26 | wind | 1 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 479 | 265.34 | radiation | 1 | 720 | < th | dose dependent | rect. | 5 | 22 |
| 484 | 265.43 | radiation | 1 | 4320 | > th | dose independent | rect. | 16 | 2 |
| 488 | 265.49 | radiation | 20 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 491 | 265.53 | radiation | 1 | 4320 | < th | dose independent | rect. | 16 | 8 |
| 492 | 265.54 | radiation | 1 | 4320 | < th | dose independent | rect. | 16 | 5 |
| 495 | 265.54 | radiation | 1 | 4320 | < th | dose independent | rect. | 16 | 12 |
| 497 | 265.55 | radiation | 1 | 4320 | < th | dose independent | rect. | 16 | 10 |
| 629 | 266.25 | wind | 9 | 14400 | < th | dose dependent | rect. | 13 | 3 |
| 647 | 266.32 | radiation | 10 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 750 | 266.96 | radiation | 1 | 4320 | < th | dose dependent | rect. | 3 | 15 |
| 754 | 266.97 | radiation | 1 | 4320 | < th | dose dependent | rect. | 20 | 22 |
| 757 | 266.99 | radiation | 1 | 4320 | < th | dose dependent | rect. | 3 | 20 |
| 761 | 266.99 | radiation | 1 | 4320 | < th | dose dependent | rect. | 1 | 23 |
| 776 | 267.02 | radiation | 1 | 4320 | < th | dose dependent | no | NA | NA |
| 878 | 267.74 | radiation | 1 | 4320 | < th | dose dependent | rect. | 15 | 23 |