Os09g0564600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase C1A, papain family protein.
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Os09g0564600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Peptidase C1A, papain family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 128.05 | 0.532 | 2.9 | -0.197 | 0.0378 | -0.405 | -0.286 | 0.851 | -0.031 | 12.2 | 1.03 | 9 | -- | -- |
| 127.97 | 0.527 | 2.89 | -0.172 | 0.047 | -0.34 | -0.21 | -- | -0.0206 | 11.6 | 1.121 | 6 | -- | -- |
| 128.39 | 0.528 | 2.9 | -0.205 | 0.0404 | -0.401 | -- | 0.74 | -0.0316 | 11.4 | 1.008 | 8 | -- | -- |
| 128.16 | 0.527 | 2.89 | -0.18 | 0.0493 | -0.346 | -- | -- | -0.0212 | 12 | 1.119 | 6 | -- | -- |
| 128.49 | 0.528 | 2.9 | -0.204 | -- | -0.392 | -- | 0.744 | -0.0319 | -- | 1.027 | 8 | -- | -- |
| 131.81 | 0.538 | 2.89 | -0.141 | 0.102 | -- | 0.0226 | -- | -0.034 | 5.65 | -- | -- | -- | -- |
| 131.81 | 0.538 | 2.89 | -0.141 | 0.103 | -- | -- | -- | -0.034 | 5.79 | -- | -- | -- | -- |
| 128.3 | 0.528 | 2.89 | -0.18 | -- | -0.333 | -- | -- | -0.0222 | -- | 1.141 | 6 | -- | -- |
| 129 | 0.529 | 2.89 | -- | 0.0493 | -0.329 | -- | -- | -0.00183 | 11.9 | 1.168 | 6 | -- | -- |
| 132.36 | 0.538 | 2.9 | -0.138 | -- | -- | -- | -- | -0.0316 | -- | -- | -- | -- | -- |
| 132.34 | 0.538 | 2.89 | -- | 0.101 | -- | -- | -- | -0.0183 | 5.86 | -- | -- | -- | -- |
| 129.15 | 0.529 | 2.89 | -- | -- | -0.316 | -- | -- | -0.00287 | -- | 1.142 | 6 | -- | -- |
| 132.86 | 0.538 | 2.89 | -- | -- | -- | -- | -- | -0.0163 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 113.87 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 4 | 5 |
| 2 | 114.22 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 23 | 10 |
| 3 | 114.51 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 7 | 2 |
| 6 | 114.76 | humidity | 60.0 | 4320 | < th | dose independent | rect. | 8 | 1 |
| 19 | 114.76 | humidity | 60.0 | 90 | < th | dose independent | rect. | 18 | 15 |
| 20 | 114.76 | humidity | 60.0 | 90 | < th | dose dependent | rect. | 18 | 15 |
| 23 | 114.80 | wind | 1.0 | 10 | < th | dose independent | rect. | 6 | 1 |
| 26 | 114.82 | humidity | 60.0 | 30 | < th | dose independent | rect. | 17 | 17 |
| 51 | 114.86 | humidity | 60.0 | 1440 | < th | dose dependent | rect. | 8 | 1 |
| 52 | 114.86 | humidity | 60.0 | 10 | < th | dose dependent | rect. | 9 | 1 |
| 81 | 114.87 | humidity | 60.0 | 30 | < th | dose independent | rect. | 9 | 1 |
| 162 | 114.89 | humidity | 60.0 | 270 | < th | dose independent | rect. | 8 | 1 |
| 218 | 114.89 | humidity | 60.0 | 270 | < th | dose dependent | rect. | 8 | 1 |
| 276 | 114.92 | wind | 1.0 | 10 | < th | dose dependent | rect. | 8 | 2 |
| 315 | 115.01 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 20 | 13 |
| 333 | 115.14 | wind | 1.0 | 10 | < th | dose independent | rect. | 8 | 2 |
| 335 | 115.14 | wind | 1.0 | 10 | < th | dose dependent | rect. | 8 | 15 |
| 364 | 115.30 | radiation | 40.0 | 30 | > th | dose dependent | rect. | 9 | 1 |
| 532 | 115.97 | wind | 1.0 | 10 | < th | dose independent | rect. | 8 | 15 |
| 563 | 117.06 | radiation | 40.0 | 10 | > th | dose dependent | sin | 12 | NA |
| 652 | 117.96 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 1 | 1 |
| 660 | 118.05 | humidity | 80.0 | 720 | < th | dose independent | rect. | 1 | 1 |
| 665 | 118.05 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 1 | 1 |
| 796 | 118.45 | radiation | 40.0 | 10 | > th | dose independent | rect. | 9 | 1 |
| 976 | 119.69 | wind | 1.0 | 10 | < th | dose dependent | sin | 21 | NA |
| 978 | 119.72 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 1 |
| 979 | 119.72 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 1 |