Os09g0563800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os09g0563800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 103.09 | 0.477 | 9.66 | -1.66 | 3.39 | 2.45 | -0.265 | 1.1 | -0.24 | 20.1 | 9.415 | 325 | 21.5 | 13.1 |
| 103.9 | 0.475 | 9.68 | -1.75 | 3.45 | 2.52 | -0.622 | -- | -0.26 | 20.1 | 9.218 | 320 | 21.5 | 13 |
| 102.52 | 0.472 | 9.66 | -1.58 | 3.48 | 2.53 | -- | 1.49 | -0.211 | 20.1 | 8.74 | 332 | 21.5 | 13 |
| 105.38 | 0.478 | 9.69 | -1.77 | 3.72 | 2.83 | -- | -- | -0.317 | 19.8 | 7.572 | 341 | 21.3 | 12.9 |
| 187.37 | 0.641 | 9.51 | -1.36 | -- | -1.13 | -- | 1 | 0.0379 | -- | -3.169 | 8275 | 1.3 | 15.8 |
| 139.88 | 0.554 | 9.57 | -1.51 | 1.45 | -- | -0.815 | -- | -0.0624 | 21.7 | -- | -- | -- | -- |
| 142.33 | 0.559 | 9.57 | -1.48 | 1.46 | -- | -- | -- | -0.0619 | 21.8 | -- | -- | -- | -- |
| 178.24 | 0.622 | 9.5 | -0.61 | -- | -1.79 | -- | -- | 0.201 | -- | -52.86 | 1875 | 23.8 | 14.3 |
| 179.43 | 0.624 | 9.66 | -- | 3.97 | 2.98 | -- | -- | -0.0806 | 19.6 | 1.347 | 369 | 20.8 | 13.3 |
| 268.68 | 0.766 | 9.53 | -1.47 | -- | -- | -- | -- | -0.0631 | -- | -- | -- | -- | -- |
| 200.35 | 0.662 | 9.53 | -- | 1.45 | -- | -- | -- | 0.103 | 21.7 | -- | -- | -- | -- |
| 200.06 | 0.659 | 9.47 | -- | -- | -1.63 | -- | -- | 0.19 | -- | -88.96 | 1874 | 23.6 | 13.4 |
| 325.62 | 0.842 | 9.49 | -- | -- | -- | -- | -- | 0.0999 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 106.56 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 22 | 13 |
| 4 | 107.92 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 7 | 22 |
| 8 | 108.45 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 5 | 2 |
| 19 | 111.07 | wind | 1.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 21 | 111.39 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 7 | 22 |
| 23 | 111.58 | wind | 5.0 | 90 | < th | dose independent | rect. | 5 | 2 |
| 27 | 111.73 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 5 | 2 |
| 31 | 111.80 | temperature | 10.0 | 90 | > th | dose independent | rect. | 5 | 2 |
| 33 | 111.80 | temperature | 30.0 | 90 | < th | dose independent | rect. | 5 | 2 |
| 34 | 111.80 | humidity | 50.0 | 90 | > th | dose independent | rect. | 5 | 2 |
| 36 | 111.80 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 5 | 2 |
| 37 | 111.80 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 5 | 2 |
| 38 | 111.80 | radiation | 40.0 | 90 | < th | dose independent | rect. | 5 | 2 |
| 39 | 111.80 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 5 | 2 |
| 40 | 111.80 | temperature | 10.0 | 90 | > th | dose independent | rect. | 7 | 22 |
| 41 | 111.80 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 5 | 2 |
| 47 | 111.88 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 50 | 111.98 | humidity | 50.0 | 90 | > th | dose independent | rect. | 7 | 22 |
| 60 | 112.41 | wind | 9.0 | 90 | < th | dose dependent | rect. | 5 | 2 |
| 61 | 112.41 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 21 | 8 |
| 63 | 112.42 | wind | 9.0 | 90 | < th | dose independent | rect. | 7 | 22 |
| 65 | 112.43 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 5 | 2 |
| 69 | 112.65 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 6 | 4 |
| 76 | 113.12 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 7 | 22 |
| 77 | 113.12 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 7 | 22 |
| 80 | 113.25 | wind | 9.0 | 1440 | < th | dose independent | rect. | 6 | 2 |
| 81 | 113.25 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 6 | 2 |
| 84 | 113.25 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 6 | 2 |
| 88 | 113.25 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 6 | 2 |
| 93 | 113.25 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 6 | 2 |
| 94 | 113.25 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 6 | 2 |
| 95 | 113.25 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 8 | 22 |
| 99 | 113.32 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 5 | 2 |
| 101 | 113.35 | temperature | 10.0 | 90 | > th | dose dependent | sin | 7 | NA |
| 112 | 113.77 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 7 | 22 |
| 113 | 113.79 | temperature | 20.0 | 90 | > th | dose independent | rect. | 7 | 22 |
| 128 | 114.15 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 18 | 9 |
| 129 | 114.21 | wind | 5.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 149 | 114.36 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 2 | 5 |
| 150 | 114.39 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 3 | 3 |
| 161 | 114.59 | temperature | 10.0 | 270 | > th | dose dependent | sin | 9 | NA |
| 190 | 114.87 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 192 | 114.87 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 193 | 114.87 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 196 | 114.87 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 197 | 114.87 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 198 | 114.87 | radiation | 20.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 202 | 114.88 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 212 | 114.98 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 3 |
| 213 | 114.98 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 259 | 115.67 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 15 | 16 |
| 260 | 115.69 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 21 | 10 |
| 267 | 115.77 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 17 | 14 |
| 298 | 115.98 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 19 | 13 |
| 309 | 116.08 | temperature | 30.0 | 270 | < th | dose dependent | sin | 9 | NA |
| 313 | 116.12 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 5 | 2 |
| 321 | 116.19 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 5 | 2 |
| 383 | 116.63 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 3 | 6 |
| 398 | 116.67 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 3 | 3 |
| 437 | 116.89 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 6 |
| 472 | 116.97 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 11 | 20 |
| 514 | 117.07 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 3 | 9 |
| 526 | 117.10 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 8 | 21 |
| 531 | 117.10 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 8 | 21 |
| 539 | 117.19 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 9 |
| 625 | 117.63 | temperature | 20.0 | 90 | > th | dose independent | rect. | 21 | 8 |
| 646 | 117.69 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 19 | 3 |
| 661 | 117.81 | wind | 9.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 725 | 117.99 | humidity | 70.0 | 30 | > th | dose independent | rect. | 18 | 11 |
| 773 | 118.21 | radiation | 1.0 | 90 | > th | dose independent | rect. | 4 | 3 |
| 844 | 118.56 | temperature | 20.0 | 270 | > th | dose independent | rect. | 21 | 14 |
| 886 | 118.73 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 7 | 12 |
| 888 | 118.73 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 7 | 12 |
| 900 | 118.80 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 6 | 1 |
| 908 | 118.83 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 6 | 1 |
| 943 | 119.03 | wind | 1.0 | 90 | > th | dose dependent | rect. | 5 | 2 |
| 945 | 119.04 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 19 | 11 |
| 949 | 119.05 | temperature | 10.0 | 720 | > th | dose independent | rect. | 7 | 12 |
| 950 | 119.05 | temperature | 10.0 | 720 | > th | dose independent | rect. | 19 | 12 |
| 951 | 119.05 | temperature | 30.0 | 720 | < th | dose independent | rect. | 19 | 12 |
| 952 | 119.05 | humidity | 50.0 | 720 | > th | dose independent | rect. | 19 | 12 |
| 953 | 119.05 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 19 | 12 |
| 954 | 119.05 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 7 | 12 |
| 955 | 119.05 | radiation | 40.0 | 720 | < th | dose independent | rect. | 19 | 12 |
| 958 | 119.06 | wind | 9.0 | 720 | < th | dose independent | rect. | 19 | 12 |
| 984 | 119.19 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 19 | 11 |
| 992 | 119.23 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 11 |