Os09g0563200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Potassium transporter 11 (AtPOT11).
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Os09g0563200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Potassium transporter 11 (AtPOT11).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 24.97 | 0.235 | 11.7 | 0.368 | 1.12 | -0.848 | 0.42 | 0.868 | 0.298 | 7.82 | 19.12 | 264 | -- | -- |
| 25.75 | 0.236 | 11.7 | 0.255 | 1.13 | -0.799 | 0.338 | -- | 0.27 | 7.58 | 18.01 | 355 | -- | -- |
| 25.44 | 0.235 | 11.7 | 0.362 | 1.13 | -0.853 | -- | 0.762 | 0.293 | 7.8 | 18.79 | 252 | -- | -- |
| 25.76 | 0.236 | 11.7 | 0.229 | 1.12 | -0.857 | -- | -- | 0.259 | 7.78 | 17.6 | 268 | -- | -- |
| 64.31 | 0.374 | 11.7 | 0.601 | -- | -1.67 | -- | 1.83 | 0.38 | -- | 24.2 | 520 | -- | -- |
| 35.79 | 0.28 | 11.8 | 0.0175 | 1.34 | -- | 0.388 | -- | 0.114 | 7.19 | -- | -- | -- | -- |
| 36.18 | 0.282 | 11.8 | 0.0252 | 1.34 | -- | -- | -- | 0.113 | 7.16 | -- | -- | -- | -- |
| 66.8 | 0.381 | 11.8 | 0.329 | -- | -1.5 | -- | -- | 0.289 | -- | 24.16 | 510 | -- | -- |
| 27.03 | 0.242 | 11.7 | -- | 1.14 | -0.791 | -- | -- | 0.221 | 7.69 | 17.47 | 265 | -- | -- |
| 131.62 | 0.536 | 11.8 | 0.0502 | -- | -- | -- | -- | 0.136 | -- | -- | -- | -- | -- |
| 36.2 | 0.281 | 11.8 | -- | 1.34 | -- | -- | -- | 0.11 | 7.16 | -- | -- | -- | -- |
| 69.54 | 0.388 | 11.8 | -- | -- | -1.45 | -- | -- | 0.242 | -- | 24.3 | 509 | -- | -- |
| 131.69 | 0.536 | 11.8 | -- | -- | -- | -- | -- | 0.131 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 24.21 | temperature | 30 | 270 | < th | dose dependent | rect. | 3 | 21 |
| 4 | 24.43 | temperature | 20 | 270 | > th | dose dependent | rect. | 6 | 22 |
| 16 | 24.72 | temperature | 30 | 720 | < th | dose dependent | rect. | 4 | 11 |
| 31 | 24.92 | temperature | 30 | 720 | < th | dose dependent | sin | 2 | NA |
| 33 | 24.93 | temperature | 20 | 270 | > th | dose dependent | rect. | 22 | 23 |
| 36 | 24.96 | temperature | 10 | 270 | > th | dose dependent | rect. | 21 | 23 |
| 45 | 25.06 | temperature | 20 | 270 | > th | dose dependent | no | NA | NA |
| 47 | 25.07 | temperature | 20 | 270 | > th | dose dependent | rect. | 24 | 23 |
| 48 | 25.08 | temperature | 10 | 720 | > th | dose dependent | rect. | 7 | 6 |
| 53 | 25.10 | temperature | 10 | 270 | > th | dose dependent | rect. | 7 | 12 |
| 68 | 25.22 | temperature | 20 | 1440 | > th | dose dependent | rect. | 8 | 1 |
| 73 | 25.25 | temperature | 20 | 1440 | > th | dose dependent | rect. | 7 | 3 |
| 89 | 25.33 | temperature | 30 | 270 | < th | dose dependent | sin | 22 | NA |
| 94 | 25.34 | temperature | 20 | 270 | > th | dose dependent | rect. | 18 | 23 |
| 108 | 25.40 | temperature | 20 | 270 | > th | dose dependent | rect. | 12 | 23 |
| 115 | 25.42 | temperature | 30 | 1440 | < th | dose dependent | rect. | 7 | 2 |
| 117 | 25.42 | temperature | 30 | 1440 | < th | dose dependent | rect. | 5 | 5 |
| 165 | 25.50 | temperature | 30 | 270 | < th | dose dependent | rect. | 16 | 23 |
| 188 | 25.55 | temperature | 10 | 720 | > th | dose dependent | rect. | 24 | 19 |
| 236 | 25.61 | temperature | 10 | 270 | > th | dose dependent | sin | 22 | NA |
| 252 | 25.64 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 276 | 25.67 | temperature | 20 | 270 | > th | dose dependent | rect. | 15 | 23 |
| 312 | 25.76 | temperature | 10 | 720 | > th | dose dependent | sin | 2 | NA |
| 448 | 25.95 | temperature | 30 | 270 | < th | dose dependent | rect. | 8 | 23 |
| 475 | 25.99 | temperature | 30 | 720 | < th | dose dependent | rect. | 20 | 20 |
| 498 | 26.02 | temperature | 15 | 1440 | > th | dose dependent | sin | 7 | NA |
| 510 | 26.03 | temperature | 30 | 1440 | < th | dose dependent | sin | 6 | NA |
| 518 | 26.03 | temperature | 30 | 720 | < th | dose dependent | rect. | 23 | 18 |
| 638 | 26.14 | temperature | 30 | 270 | < th | dose dependent | rect. | 10 | 23 |
| 827 | 26.32 | temperature | 25 | 270 | < th | dose independent | rect. | 4 | 19 |