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Os09g0558000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Protein phosphatase type-2C.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.9 (0.0117) R2 : 0.0026
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0269 (0.0247) R2dN8 : 0.00336 R2N8 : 0.0026
σ : 0.221
deviance : 22.34
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
14.3 0.178 11.9 0.558 0.102 -0.576 0.147 0.427 0.138 16.7 10.66 4634 -- --
14.46 0.177 11.9 0.475 0.083 -0.609 0.154 -- 0.127 16.4 9.058 5817 -- --
14.35 0.176 11.9 0.561 0.108 -0.577 -- 0.431 0.14 17.2 10.49 4699 -- --
14.48 0.177 11.9 0.481 0.0934 -0.617 -- -- 0.131 17.1 10.9 5819 -- --
14.81 0.179 11.9 0.546 -- -0.579 -- 0.393 0.136 -- 9.679 4245 -- --
20.78 0.214 11.9 0.184 0.107 -- 0.153 -- -0.00478 16.3 -- -- -- --
20.84 0.214 11.9 0.185 0.11 -- -- -- -0.00396 16.7 -- -- -- --
14.79 0.179 11.9 0.586 -- -0.639 -- -- 0.205 -- 8.449 11376 -- --
18.5 0.2 11.9 -- 0.102 -0.374 -- -- 0.0358 18.5 9.954 2374 -- --
21.47 0.217 11.9 0.181 -- -- -- -- -0.00682 -- -- -- -- --
21.74 0.218 11.9 -- 0.106 -- -- -- -0.0246 16.8 -- -- -- --
18.93 0.203 11.9 -- -- -0.37 -- -- 0.0336 -- 9.691 2599 -- --
22.34 0.221 11.9 -- -- -- -- -- -0.0269 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 13.58 radiation 40.0 14400 < th dose dependent rect. 18 2
2 13.60 radiation 40.0 14400 < th dose dependent rect. 18 4
13 13.74 radiation 30.0 4320 < th dose independent rect. 15 17
14 13.75 radiation 30.0 14400 < th dose dependent rect. 18 6
19 13.76 radiation 10.0 14400 < th dose dependent rect. 18 6
24 13.80 radiation 10.0 14400 < th dose independent rect. 17 1
26 13.81 radiation 10.0 14400 < th dose dependent rect. 18 11
30 13.82 radiation 10.0 14400 < th dose dependent rect. 18 8
33 13.83 wind 1.0 43200 > th dose dependent rect. 8 1
35 13.84 wind 9.0 43200 > th dose dependent rect. 20 10
37 13.85 radiation 10.0 14400 < th dose independent rect. 17 3
38 13.85 radiation 10.0 14400 < th dose independent rect. 17 5
47 13.87 wind 9.0 43200 < th dose dependent rect. 8 1
49 13.88 radiation 10.0 14400 < th dose independent rect. 17 9
50 13.88 radiation 10.0 14400 < th dose independent rect. 17 11
64 13.92 radiation 1.0 14400 > th dose dependent rect. 18 1
79 13.95 wind 9.0 43200 > th dose independent rect. 20 9
83 13.96 wind 9.0 43200 > th dose dependent rect. 20 4
90 13.99 wind 9.0 43200 > th dose independent rect. 20 5
94 14.00 wind 9.0 43200 < th dose independent rect. 20 8
102 14.01 wind 9.0 43200 < th dose independent rect. 20 10
106 14.02 wind 9.0 43200 < th dose independent rect. 20 5
116 14.05 wind 5.0 43200 > th dose independent rect. 6 1
120 14.05 radiation 30.0 4320 > th dose dependent rect. 15 17
121 14.06 wind 5.0 43200 < th dose independent rect. 6 1
131 14.09 radiation 10.0 4320 > th dose dependent rect. 16 15
132 14.10 temperature 10.0 4320 > th dose dependent rect. 9 2
138 14.11 radiation 1.0 14400 > th dose independent rect. 18 12
140 14.11 temperature 10.0 14400 > th dose dependent rect. 18 1
150 14.13 radiation 20.0 4320 < th dose independent rect. 16 15
152 14.13 temperature 30.0 14400 < th dose dependent rect. 18 1
161 14.14 radiation 1.0 14400 > th dose independent rect. 18 14
182 14.15 wind 9.0 43200 < th dose dependent rect. 3 7
186 14.16 wind 3.0 43200 < th dose dependent rect. 3 2
220 14.18 radiation 1.0 14400 > th dose independent rect. 18 16
253 14.20 temperature 10.0 14400 > th dose dependent rect. 20 1
254 14.20 temperature 30.0 14400 < th dose dependent rect. 20 1
279 14.21 temperature 30.0 4320 < th dose dependent rect. 8 3
353 14.24 radiation 1.0 14400 > th dose independent sin 10 NA
354 14.24 wind 5.0 43200 < th dose independent rect. 5 5
437 14.27 radiation 1.0 14400 < th dose independent rect. 18 16
441 14.27 temperature 10.0 4320 > th dose dependent sin 1 NA
467 14.28 radiation 1.0 14400 < th dose independent sin 10 NA
468 14.28 wind 5.0 43200 > th dose independent rect. 5 5
501 14.29 radiation 1.0 14400 > th dose independent rect. 4 4
545 14.29 wind 3.0 43200 > th dose dependent rect. 19 15
546 14.29 wind 3.0 43200 > th dose dependent rect. 18 18
597 14.31 humidity 80.0 14400 < th dose independent rect. 18 1
598 14.31 precipitation 0.1 43200 > th dose independent rect. 17 2
599 14.31 radiation 1.0 14400 < th dose independent rect. 4 4
665 14.32 precipitation 0.1 43200 < th dose independent rect. 17 2
687 14.32 precipitation 0.1 43200 < th dose dependent rect. 17 2
810 14.34 wind 3.0 43200 > th dose independent rect. 3 6
812 14.34 wind 3.0 43200 < th dose independent rect. 3 6
947 14.35 precipitation 0.1 43200 > th dose dependent rect. 16 3