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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os09g0551500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Curculin-like (mannose-binding) lectin domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.2 (0.0331) R2 : 0.166
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : 5.51 (0.589) R2dE : 0.16 R2E : 0.161
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.106 (0.0697) R2dN8 : 0.00559 R2N8 : 0.00582
σ : 0.622
deviance : 178.15
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C
peak time of C : --
E
wheather : humidity
threshold : 68.35
memory length : 164
response mode : < th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 1.45
open length of G : 6.07

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
172.83 0.618 3.22 0.0271 0.129 5.76 0.0965 -26.2 -0.0704 22.4 79.98 205 1.02 5.99
177.81 0.621 3.22 0.0141 0.223 5.66 0.0488 -- -0.101 22.1 69.72 171 1.25 6.28
172.56 0.612 3.21 0.0284 0.147 5.08 -- -23.8 -0.0607 22.3 79.28 199 1.05 6.13
176.36 0.619 3.21 0.161 0.137 5.56 -- -- -0.0658 22.2 69 166 1.48 6.08
173.47 0.613 3.21 0.0303 -- 4.91 -- -22.7 -0.0673 -- 79.3 197 1.04 6.17
211.02 0.681 3.2 0.0563 0.0282 -- 0.683 -- -0.122 19.5 -- -- -- --
211.76 0.681 3.2 0.0361 0.0981 -- -- -- -0.123 0.695 -- -- -- --
177.48 0.62 3.2 0.163 -- 5.3 -- -- -0.111 -- 68.18 169 1.41 6.02
177.18 0.62 3.2 -- 0.133 5.62 -- -- -0.0651 22.8 68.71 165 1.45 6.05
212.37 0.681 3.2 0.0396 -- -- -- -- -0.122 -- -- -- -- --
211.8 0.681 3.2 -- 0.0986 -- -- -- -0.127 0.712 -- -- -- --
178.15 0.622 3.2 -- -- 5.51 -- -- -0.106 -- 68.35 164 1.45 6.07
212.41 0.68 3.2 -- -- -- -- -- -0.126 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 175.53 humidity 80 90 < th dose independent rect. 1 6
3 176.30 humidity 70 90 < th dose independent rect. 19 14
4 176.35 humidity 80 1440 < th dose independent rect. 23 9
7 176.77 humidity 80 90 < th dose dependent rect. 23 10
10 176.84 humidity 80 90 < th dose dependent rect. 1 8
15 177.16 humidity 70 90 < th dose independent rect. 6 3
26 177.26 humidity 80 90 < th dose dependent rect. 5 4
31 177.47 humidity 80 1440 < th dose independent rect. 1 7
35 177.84 humidity 80 1440 > th dose independent rect. 24 8
40 178.80 humidity 80 10 < th dose dependent rect. 22 10
43 178.93 humidity 80 720 < th dose dependent rect. 21 11
59 179.23 humidity 80 10 < th dose dependent rect. 7 1
84 179.53 humidity 80 1440 < th dose dependent rect. 6 2
138 180.24 humidity 80 1440 > th dose independent rect. 3 4
140 180.28 humidity 80 1440 > th dose independent rect. 6 1
141 180.29 radiation 30 30 > th dose dependent rect. 7 2
224 180.39 radiation 30 30 > th dose independent rect. 7 1
302 180.56 humidity 70 10 < th dose independent rect. 7 1
350 180.56 humidity 70 1440 > th dose independent rect. 21 11
430 180.60 humidity 70 1440 > th dose independent rect. 5 3
472 180.82 humidity 80 1440 < th dose independent rect. 6 1
987 183.50 atmosphere 995 10 > th dose independent sin 6 NA
992 183.59 radiation 30 1440 < th dose independent rect. 21 10