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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os09g0550500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Curculin-like (mannose-binding) lectin domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 5.3 (0.036) R2 : 0.185
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -1.66 (0.164) R2dE : 0.196 R2E : 0.154
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.276 (0.0779) R2dN8 : 0.031 R2N8 : -0.0111
σ : 0.672
deviance : 208.13
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_____
C
peak time of C : --
E
wheather : temperature
threshold : 4.645
memory length : 622
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
199.24 0.663 5.26 0.0807 0.379 -1.73 -0.286 2.37 0.335 12.7 9.698 286 -- --
202.77 0.663 5.29 -0.243 0.435 -1.7 -0.194 -- 0.274 12.5 14.35 211 -- --
199.55 0.658 5.26 0.0622 0.366 -1.73 -- 2.3 0.33 12.7 8.77 301 -- --
202.2 0.662 5.31 -0.262 0.518 -1.76 -- -- 0.247 12.2 7.2 147 -- --
201.61 0.661 5.26 0.14 -- -1.61 -- 2.43 0.343 -- 4.455 603 -- --
232.21 0.714 5.35 -0.656 0.457 -- 0.0772 -- -0.00397 8.02 -- -- -- --
232.23 0.714 5.35 -0.654 0.457 -- -- -- -0.004 8.03 -- -- -- --
206.23 0.669 5.31 -0.282 -- -1.56 -- -- 0.232 -- 13.49 609 -- --
204.17 0.666 5.29 -- 0.549 -1.88 -- -- 0.286 12.3 7.602 146 -- --
243.64 0.729 5.36 -0.65 -- -- -- -- 0.00174 -- -- -- -- --
243.5 0.73 5.34 -- 0.453 -- -- -- 0.0689 8.14 -- -- -- --
208.13 0.672 5.3 -- -- -1.66 -- -- 0.276 -- 4.645 622 -- --
254.78 0.745 5.35 -- -- -- -- -- 0.0738 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 194.20 temperature 10 270 > th dose dependent rect. 22 23
2 194.58 temperature 30 30 < th dose dependent rect. 5 21
3 194.63 temperature 30 30 < th dose dependent rect. 3 23
5 195.35 temperature 10 1440 > th dose dependent rect. 8 1
8 195.52 temperature 30 1440 < th dose dependent rect. 7 2
23 196.57 temperature 15 90 > th dose dependent rect. 24 23
25 196.77 temperature 15 270 > th dose dependent rect. 11 23
27 196.86 temperature 30 10 < th dose dependent rect. 10 16
28 196.89 temperature 30 90 < th dose dependent rect. 11 14
31 196.98 temperature 15 30 > th dose dependent rect. 7 23
57 197.75 temperature 30 1440 < th dose dependent rect. 22 1
61 197.83 temperature 30 1440 > th dose independent rect. 13 1
65 197.87 temperature 25 1440 > th dose dependent rect. 7 1
70 197.99 temperature 15 30 > th dose dependent rect. 2 19
75 198.09 temperature 15 1440 > th dose dependent rect. 22 1
90 198.30 temperature 15 270 > th dose dependent rect. 5 23
98 198.39 temperature 10 1440 > th dose dependent rect. 21 14
110 198.44 wind 9 43200 > th dose dependent rect. 13 19
120 198.53 temperature 30 1440 < th dose dependent rect. 21 13
131 198.59 temperature 15 270 > th dose dependent rect. 11 16
139 198.64 wind 9 43200 > th dose independent rect. 13 21
148 198.69 wind 9 43200 > th dose dependent sin 17 NA
156 198.73 wind 9 43200 < th dose independent rect. 14 20
181 198.82 temperature 25 1440 > th dose dependent rect. 21 12
206 198.92 temperature 30 30 < th dose dependent rect. 21 23
239 199.09 temperature 10 1440 > th dose dependent sin 7 NA
254 199.16 wind 9 43200 > th dose dependent sin 14 NA
262 199.22 temperature 10 720 > th dose dependent rect. 7 20
265 199.24 wind 7 43200 > th dose dependent rect. 14 22
266 199.24 temperature 30 270 < th dose dependent rect. 8 23
268 199.26 wind 9 43200 > th dose independent rect. 16 23
277 199.28 temperature 10 270 > th dose dependent no NA NA
290 199.34 temperature 10 30 > th dose dependent sin 17 NA
308 199.38 wind 9 43200 > th dose independent rect. 6 18
309 199.38 temperature 25 30 < th dose dependent sin 18 NA
314 199.39 temperature 30 1440 < th dose dependent sin 8 NA
323 199.40 temperature 10 720 > th dose dependent rect. 15 21
351 199.46 wind 9 43200 > th dose independent rect. 20 23
359 199.48 wind 9 43200 > th dose independent no NA NA
375 199.50 temperature 25 1440 > th dose dependent rect. 24 9
380 199.52 temperature 15 30 > th dose dependent rect. 22 23
386 199.54 wind 9 43200 > th dose independent rect. 22 23
401 199.58 wind 9 43200 < th dose independent rect. 16 23
415 199.62 wind 7 43200 > th dose dependent rect. 16 23
429 199.66 wind 9 43200 > th dose independent sin 13 NA
456 199.72 wind 9 43200 < th dose independent rect. 3 21
467 199.74 wind 9 43200 < th dose independent rect. 6 18
485 199.76 wind 7 43200 > th dose dependent rect. 6 18
487 199.77 wind 9 43200 < th dose independent rect. 6 22
489 199.77 wind 9 43200 < th dose independent rect. 20 23
496 199.78 wind 7 43200 > th dose dependent rect. 6 21
525 199.82 temperature 30 270 < th dose dependent rect. 15 23
526 199.83 wind 9 43200 < th dose independent no NA NA
534 199.84 wind 9 43200 < th dose independent rect. 23 23
547 199.86 wind 7 43200 > th dose dependent rect. 20 23
593 199.94 wind 7 43200 > th dose dependent no NA NA
594 199.94 temperature 15 90 > th dose dependent rect. 13 15
628 200.00 wind 7 43200 > th dose dependent rect. 23 23
644 200.02 radiation 30 4320 < th dose independent rect. 17 15
665 200.04 wind 9 43200 > th dose dependent rect. 10 14
674 200.05 temperature 30 10 < th dose dependent rect. 8 18
707 200.10 radiation 30 4320 < th dose independent rect. 5 3
739 200.15 radiation 30 4320 < th dose independent rect. 7 1
744 200.15 temperature 10 720 > th dose dependent rect. 13 23
769 200.20 wind 9 43200 < th dose independent sin 13 NA
848 200.31 temperature 25 720 > th dose dependent sin 10 NA
859 200.33 temperature 30 270 < th dose dependent no NA NA
924 200.43 temperature 25 270 > th dose independent rect. 11 21
945 200.45 temperature 30 270 < th dose dependent rect. 10 23
966 200.50 radiation 30 4320 < th dose independent rect. 22 10
970 200.50 wind 7 43200 > th dose dependent rect. 6 13
979 200.51 wind 9 43200 < th dose independent rect. 6 13