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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os09g0549300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Flavin-containing monooxygenase FMO family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.09 (0.0359) R2 : 0.000512
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0365 (0.0756) R2dN8 : 0.000661 R2N8 : 0.000512
σ : 0.676
deviance : 210.01
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
202.48 0.669 3.09 -0.161 0.429 -0.235 -0.489 0.527 0.0349 14.2 79.87 19 -- --
203.4 0.664 3.09 -0.2 0.431 -0.234 0.0267 -- 0.0266 13.7 79.43 18 -- --
202.88 0.663 3.09 -0.184 0.432 -0.239 -- 0.284 0.0286 13.8 79.06 18 -- --
203.4 0.664 3.09 -0.195 0.438 -0.242 -- -- 0.0259 13.8 79.43 18 -- --
207.56 0.675 3.1 -0.215 -- 0.0548 -- 0.382 0.0156 -- 72.57 16 -- --
206.26 0.673 3.1 -0.219 0.196 -- 0.125 -- 0.0148 12.6 -- -- -- --
206.31 0.673 3.1 -0.213 0.197 -- -- -- 0.0159 13 -- -- -- --
208.21 0.675 3.1 -0.216 -- 0.0671 -- -- 0.00574 -- 84.86 15 -- --
204.39 0.666 3.09 -- 0.452 -0.25 -- -- 0.0483 13.8 79.34 18 -- --
208.72 0.675 3.1 -0.221 -- -- -- -- 0.0121 -- -- -- -- --
207.51 0.674 3.09 -- 0.201 -- -- -- 0.0396 13 -- -- -- --
208.65 0.673 3.09 -- -- 0.158 -- -- 0.0499 -- 65.93 19 -- --
210.01 0.676 3.09 -- -- -- -- -- 0.0365 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 196.38 humidity 80.0 90 < th dose independent rect. 23 2
5 196.44 humidity 80.0 30 < th dose dependent rect. 23 1
14 197.71 humidity 80.0 30 < th dose independent rect. 23 5
18 197.87 humidity 80.0 30 < th dose dependent rect. 23 5
23 197.94 humidity 80.0 90 > th dose independent rect. 11 10
46 198.91 humidity 80.0 30 > th dose independent rect. 19 2
61 199.39 temperature 25.0 10 > th dose independent rect. 8 12
63 199.48 wind 5.0 10 > th dose dependent rect. 23 1
64 199.49 temperature 25.0 10 < th dose independent rect. 10 7
66 199.55 wind 5.0 10 > th dose independent rect. 23 1
75 199.64 wind 9.0 30 < th dose independent rect. 21 23
79 199.70 temperature 25.0 90 < th dose independent rect. 11 6
83 199.75 humidity 80.0 10 > th dose dependent rect. 20 1
93 199.88 temperature 25.0 30 > th dose independent rect. 8 8
113 200.29 temperature 20.0 10 > th dose dependent rect. 8 12
119 200.49 temperature 25.0 10 < th dose independent rect. 10 10
120 200.49 humidity 80.0 90 > th dose independent rect. 24 21
133 200.61 humidity 70.0 90 > th dose dependent rect. 19 2
141 200.64 wind 5.0 10 < th dose dependent rect. 20 1
143 200.66 humidity 70.0 90 > th dose dependent rect. 11 10
149 200.70 humidity 70.0 90 > th dose dependent rect. 9 12
158 200.77 temperature 25.0 90 > th dose independent rect. 21 22
161 200.79 radiation 1.0 720 < th dose independent rect. 10 1
163 200.79 radiation 1.0 720 < th dose dependent rect. 10 1
168 200.84 humidity 80.0 90 < th dose independent rect. 8 13
172 200.90 wind 5.0 10 < th dose independent rect. 20 1
186 200.97 temperature 25.0 90 > th dose independent rect. 8 6
188 200.97 atmosphere 1010.0 30 < th dose dependent rect. 20 1
190 200.98 temperature 25.0 90 < th dose independent sin 23 NA
196 201.02 humidity 70.0 10 > th dose dependent rect. 10 11
225 201.14 temperature 25.0 270 < th dose independent rect. 2 15
239 201.19 atmosphere 995.0 10 > th dose independent rect. 21 23
244 201.20 wind 1.0 720 > th dose independent rect. 9 8
246 201.20 atmosphere 1000.0 90 < th dose dependent rect. 24 14
251 201.22 temperature 25.0 90 < th dose independent rect. 5 12
260 201.24 humidity 80.0 90 > th dose independent rect. 4 17
262 201.25 temperature 30.0 10 < th dose dependent rect. 20 1
263 201.25 atmosphere 995.0 30 > th dose dependent rect. 21 14
268 201.27 humidity 80.0 90 > th dose dependent rect. 12 1
272 201.28 wind 7.0 90 < th dose independent rect. 21 14
288 201.32 wind 1.0 10 > th dose independent rect. 20 1
290 201.32 temperature 10.0 10 > th dose independent rect. 20 1
292 201.32 temperature 30.0 10 < th dose independent rect. 20 1
293 201.32 humidity 50.0 10 > th dose independent rect. 20 1
296 201.32 atmosphere 995.0 10 > th dose independent rect. 20 1
297 201.32 atmosphere 1010.0 10 < th dose independent rect. 20 1
299 201.32 radiation 1.0 10 < th dose independent rect. 20 1
304 201.32 precipitation 0.1 10 < th dose independent rect. 20 1
308 201.32 temperature 10.0 10 > th dose independent rect. 21 23
309 201.32 radiation 1.0 10 < th dose dependent rect. 20 1
314 201.32 precipitation 0.1 10 < th dose dependent rect. 20 1
317 201.33 humidity 80.0 1440 < th dose independent rect. 23 1
321 201.34 atmosphere 1015.0 4320 > th dose independent rect. 21 6
322 201.34 atmosphere 1015.0 4320 < th dose independent rect. 21 6
325 201.34 atmosphere 1015.0 4320 > th dose dependent rect. 2 2
329 201.35 atmosphere 1000.0 720 > th dose independent rect. 23 8
351 201.38 humidity 80.0 1440 < th dose dependent rect. 23 1
358 201.39 humidity 50.0 90 > th dose independent rect. 21 14
361 201.40 temperature 25.0 90 > th dose independent sin 1 NA
370 201.42 humidity 80.0 720 > th dose independent rect. 11 1
371 201.42 humidity 80.0 90 > th dose independent rect. 12 1
373 201.43 atmosphere 1015.0 4320 < th dose independent rect. 23 2
385 201.44 atmosphere 1015.0 4320 > th dose independent rect. 23 2
420 201.48 radiation 40.0 1440 < th dose dependent rect. 22 7
427 201.49 temperature 25.0 90 < th dose dependent rect. 11 3
430 201.50 temperature 25.0 10 > th dose independent rect. 8 17
431 201.50 temperature 10.0 10 > th dose dependent rect. 20 1
437 201.51 temperature 20.0 270 > th dose dependent rect. 8 1
438 201.51 atmosphere 995.0 10 > th dose dependent rect. 20 1
447 201.52 atmosphere 1015.0 4320 > th dose dependent rect. 1 4
448 201.53 atmosphere 1015.0 4320 > th dose independent rect. 1 2
449 201.53 atmosphere 1015.0 4320 < th dose independent rect. 1 2
451 201.53 atmosphere 1000.0 720 > th dose independent rect. 19 16
459 201.54 temperature 20.0 10 > th dose dependent rect. 8 8
460 201.54 temperature 30.0 30 < th dose dependent rect. 11 10
472 201.56 temperature 25.0 10 < th dose independent rect. 8 9
483 201.58 humidity 80.0 90 > th dose independent rect. 21 7
503 201.61 atmosphere 995.0 90 > th dose independent rect. 11 10
523 201.63 atmosphere 1015.0 4320 > th dose dependent rect. 24 6
544 201.65 atmosphere 1005.0 30 > th dose independent rect. 22 13
547 201.65 temperature 30.0 10 < th dose dependent rect. 6 15
548 201.66 temperature 25.0 10 < th dose independent sin 21 NA
549 201.66 humidity 80.0 90 > th dose independent sin 21 NA
570 201.67 radiation 20.0 10 < th dose independent rect. 9 15
596 201.68 humidity 80.0 10 < th dose independent rect. 8 22
608 201.69 temperature 25.0 270 > th dose independent rect. 8 1
621 201.70 humidity 80.0 90 > th dose independent rect. 21 11
636 201.72 radiation 1.0 90 < th dose independent rect. 10 5
641 201.72 atmosphere 1000.0 10 < th dose dependent rect. 12 2
642 201.72 radiation 1.0 90 < th dose dependent rect. 10 5
644 201.72 atmosphere 995.0 90 > th dose dependent rect. 11 10
660 201.74 temperature 25.0 270 < th dose dependent rect. 9 8
664 201.74 temperature 30.0 90 < th dose dependent rect. 5 16
668 201.75 humidity 80.0 10 < th dose independent rect. 8 20
671 201.76 humidity 80.0 1440 > th dose independent rect. 23 2
673 201.76 radiation 40.0 90 < th dose independent rect. 11 10
674 201.76 humidity 80.0 10 < th dose independent rect. 8 18
676 201.76 atmosphere 1000.0 90 < th dose dependent rect. 12 1
693 201.78 atmosphere 1000.0 90 < th dose independent rect. 12 1
694 201.78 temperature 30.0 10 < th dose independent rect. 15 10
697 201.78 precipitation 0.1 90 < th dose independent rect. 11 10
701 201.78 temperature 25.0 30 > th dose independent rect. 8 20
704 201.78 precipitation 0.1 90 < th dose dependent rect. 11 10
714 201.79 radiation 1.0 720 < th dose dependent rect. 21 8
719 201.80 atmosphere 1000.0 720 < th dose independent rect. 2 1
723 201.80 temperature 10.0 90 > th dose independent rect. 11 10
724 201.80 atmosphere 1015.0 90 < th dose independent rect. 11 10
727 201.80 temperature 10.0 90 > th dose independent rect. 21 14
728 201.80 atmosphere 995.0 90 > th dose independent rect. 21 14
729 201.80 temperature 25.0 90 > th dose independent rect. 4 15
742 201.81 humidity 80.0 10 > th dose independent rect. 1 8
784 201.84 wind 1.0 720 > th dose independent rect. 13 8
811 201.85 atmosphere 1000.0 90 < th dose dependent rect. 4 10
819 201.86 temperature 25.0 30 > th dose independent rect. 22 18
830 201.87 temperature 25.0 10 > th dose dependent sin 4 NA
832 201.87 temperature 20.0 90 > th dose dependent rect. 7 6
836 201.88 atmosphere 1000.0 10 < th dose independent rect. 12 3
839 201.88 temperature 20.0 10 > th dose dependent rect. 8 6
860 201.90 atmosphere 1010.0 90 < th dose dependent rect. 24 6
863 201.90 temperature 20.0 10 > th dose dependent rect. 8 17
869 201.91 radiation 20.0 10 < th dose independent rect. 9 12
872 201.91 humidity 80.0 90 > th dose independent rect. 24 14
876 201.91 atmosphere 1000.0 90 < th dose dependent rect. 8 6
880 201.92 wind 9.0 30 < th dose independent sin 6 NA
885 201.92 humidity 80.0 90 > th dose independent rect. 23 9
912 201.94 wind 9.0 90 < th dose independent rect. 11 10
916 201.94 wind 1.0 720 > th dose independent rect. 9 16
920 201.94 wind 1.0 30 > th dose dependent rect. 2 1
933 201.95 temperature 30.0 90 < th dose dependent rect. 5 12
942 201.96 radiation 20.0 14400 < th dose dependent rect. 21 1
950 201.97 radiation 20.0 10 > th dose independent sin 17 NA
955 201.97 wind 1.0 720 > th dose independent rect. 9 12
964 201.97 temperature 25.0 270 > th dose dependent rect. 21 12
970 201.98 precipitation 0.1 720 < th dose independent rect. 1 8
971 201.98 wind 1.0 90 > th dose independent rect. 11 10
984 201.98 precipitation 0.1 720 < th dose dependent rect. 1 8
989 201.99 atmosphere 1015.0 4320 > th dose independent sin 11 NA