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Os09g0548400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Adrenodoxin reductase family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.01 (0.0457) R2 : 0.915
β1 : -2.31 (0.176) R2dD : 0.0394 R2D : 0.0552
β2 : 6.12 (0.125) R2dC : 0.575 R2C : 0.775
β3 : 2.69 (0.162) R2dE : 0.0658 R2E : 0.238
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : 7.85 (0.759) R2dD*E : 0.0202 R2D*E : 0.0595
γ1 : 0.0488 (0.0976) R2dN8 : -5.94e-06 R2N8 : -2.21e-05
σ : 0.84
deviance : 325.07
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C
peak time of C : 14.7
E
wheather : temperature
threshold : 10.4
memory length : 301
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 8.27
open length of G : 17

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
321.23 0.842 8.02 -2.31 6.04 2.58 -1.34 7.97 0.021 14.8 10.96 279 8.16 17
381.72 0.91 8.14 -2.93 5.94 2.77 0.732 -- -0.224 14.9 15.29 309 7.91 16.5
325.07 0.84 8.01 -2.31 6.12 2.69 -- 7.85 0.0488 14.7 10.4 301 8.27 17
382.54 0.911 8.13 -3.09 6.04 2.72 -- -- -0.237 14.9 16.13 307 7.95 16.6
662.66 1.2 7.98 -2.16 -- 7.84 -- 8.6 0.433 -- 0.4413 314 7.52 10.6
440.1 0.983 8.12 -2.61 7.49 -- 2.05 -- 0.00881 15.6 -- -- -- --
452.77 0.996 8.11 -2.57 7.5 -- -- -- 0.0204 15.6 -- -- -- --
463.44 1 8.15 -3.27 -- 7.39 -- -- -0.115 -- -3.044 320 7.18 10.9
613.9 1.15 8.07 -- 6.18 2.64 -- -- 0.187 14.8 10.86 310 8.23 16.4
3586.12 2.8 8.11 -2.89 -- -- -- -- -0.179 -- -- -- -- --
627.31 1.17 8.05 -- 7.55 -- -- -- 0.307 15.6 -- -- -- --
609.45 1.15 8.01 -- -- 7.43 -- -- 0.246 -- -173.1 476 5.7 11.7
3806.14 2.88 8.03 -- -- -- -- -- 0.141 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 323.82 temperature 10.0 270 > th dose dependent rect. 8 17
7 327.71 temperature 30.0 270 < th dose dependent rect. 1 20
27 334.32 temperature 30.0 270 < th dose independent rect. 1 20
35 337.10 temperature 30.0 270 < th dose independent rect. 2 18
65 343.27 temperature 30.0 270 < th dose independent rect. 16 14
67 343.64 temperature 10.0 720 > th dose dependent rect. 5 13
68 343.73 temperature 10.0 720 > th dose dependent rect. 6 11
86 346.34 humidity 70.0 270 > th dose independent rect. 17 13
98 347.71 atmosphere 1005.0 10 > th dose dependent rect. 15 8
100 347.91 temperature 30.0 720 < th dose independent rect. 3 11
101 348.14 temperature 30.0 270 < th dose independent rect. 15 6
106 348.71 temperature 15.0 720 > th dose dependent rect. 15 2
120 349.50 temperature 30.0 270 < th dose independent rect. 14 8
122 349.54 atmosphere 1005.0 270 > th dose independent rect. 16 5
173 352.70 temperature 10.0 10 > th dose dependent rect. 23 21
195 353.46 temperature 30.0 720 < th dose independent rect. 19 18
211 353.94 atmosphere 1005.0 270 > th dose dependent rect. 18 1
221 354.37 humidity 70.0 270 > th dose independent rect. 16 5
250 355.28 temperature 10.0 720 > th dose dependent sin 1 NA
280 356.54 radiation 10.0 270 < th dose dependent rect. 16 14
281 356.55 temperature 20.0 720 > th dose dependent rect. 23 18
284 356.66 atmosphere 995.0 10 > th dose dependent rect. 4 19
293 356.90 temperature 20.0 720 > th dose dependent rect. 1 16
295 356.92 temperature 25.0 720 < th dose independent sin 6 NA
302 357.06 temperature 30.0 270 < th dose independent rect. 9 12
330 357.55 temperature 25.0 720 < th dose independent rect. 24 9
333 357.58 humidity 90.0 720 < th dose independent rect. 15 2
345 357.85 humidity 50.0 270 > th dose dependent rect. 15 6
347 357.92 temperature 10.0 270 > th dose dependent sin 20 NA
348 357.92 temperature 10.0 720 > th dose dependent rect. 6 3
352 357.97 temperature 15.0 10 > th dose dependent rect. 16 12
375 358.40 atmosphere 995.0 720 > th dose independent rect. 9 12
377 358.42 temperature 30.0 270 < th dose independent rect. 11 10
391 358.60 humidity 90.0 720 < th dose independent rect. 14 4
425 359.15 temperature 15.0 270 > th dose dependent rect. 15 11
434 359.24 temperature 10.0 10 > th dose dependent sin 18 NA
439 359.36 temperature 15.0 270 > th dose dependent sin 15 NA
487 360.06 temperature 10.0 720 > th dose dependent rect. 23 10
509 360.33 temperature 15.0 270 > th dose dependent rect. 23 1
544 360.76 temperature 30.0 720 < th dose independent rect. 9 4
560 360.94 temperature 20.0 720 > th dose independent rect. 5 13
594 361.21 temperature 15.0 10 > th dose dependent rect. 23 5
616 361.43 temperature 15.0 270 > th dose dependent rect. 21 4
617 361.43 temperature 10.0 270 > th dose dependent rect. 21 20
629 361.56 humidity 70.0 270 > th dose independent rect. 18 1
707 362.68 temperature 25.0 270 > th dose dependent sin 12 NA
716 362.79 temperature 10.0 10 > th dose dependent rect. 10 18
729 362.91 temperature 10.0 270 > th dose dependent rect. 19 23
750 363.04 atmosphere 995.0 720 > th dose independent rect. 9 21
764 363.19 radiation 1.0 720 > th dose independent rect. 15 2
773 363.25 temperature 30.0 720 < th dose independent rect. 9 8
778 363.29 radiation 10.0 270 < th dose independent rect. 16 14
808 363.49 temperature 10.0 90 > th dose dependent rect. 21 23
809 363.51 temperature 30.0 720 < th dose independent rect. 9 6
821 363.62 radiation 10.0 720 < th dose dependent rect. 11 19
840 363.83 temperature 30.0 270 < th dose dependent rect. 1 10
862 364.01 precipitation 0.1 270 < th dose independent rect. 13 13
863 364.01 precipitation 0.1 270 < th dose dependent rect. 13 13
876 364.13 temperature 15.0 270 > th dose dependent rect. 19 7
901 364.32 temperature 10.0 10 > th dose dependent rect. 14 14
960 364.78 temperature 30.0 720 < th dose dependent rect. 3 2
986 364.97 temperature 30.0 270 < th dose independent sin 20 NA