Os09g0547300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF630 domain containing protein.
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Os09g0547300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF630 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 51.2 | 0.336 | 8.48 | 1.37 | 0.379 | -0.572 | 0.245 | 1.29 | 0.287 | 1.91 | 20.11 | 1213 | -- | -- |
| 52.22 | 0.337 | 8.52 | 1.03 | 0.395 | -0.714 | 0.435 | -- | 0.193 | 1.08 | 15.46 | 888 | -- | -- |
| 51.36 | 0.334 | 8.48 | 1.37 | 0.387 | -0.585 | -- | 1.43 | 0.294 | 1.79 | 20.46 | 1140 | -- | -- |
| 52.79 | 0.338 | 8.53 | 1.02 | 0.392 | -0.715 | -- | -- | 0.189 | 0.988 | 15.2 | 887 | -- | -- |
| 54.28 | 0.345 | 8.51 | 1.02 | -- | -0.704 | -- | 0.316 | 0.205 | -- | 20.46 | 1140 | -- | -- |
| 59.62 | 0.362 | 8.55 | 0.83 | 0.301 | -- | 0.328 | -- | 0.0743 | 2.02 | -- | -- | -- | -- |
| 60.01 | 0.363 | 8.55 | 0.82 | 0.303 | -- | -- | -- | 0.0722 | 2.24 | -- | -- | -- | -- |
| 54.38 | 0.345 | 8.52 | 0.965 | -- | -0.686 | -- | -- | 0.189 | -- | 20.46 | 1140 | -- | -- |
| 76.19 | 0.407 | 8.56 | -- | 0.246 | -0.297 | -- | -- | 0.0263 | 0.865 | 21.37 | 333 | -- | -- |
| 65.5 | 0.378 | 8.55 | 0.833 | -- | -- | -- | -- | 0.0795 | -- | -- | -- | -- | -- |
| 77.75 | 0.412 | 8.57 | -- | 0.319 | -- | -- | -- | -0.0192 | 2.29 | -- | -- | -- | -- |
| 77.86 | 0.412 | 8.55 | -- | -- | -0.485 | -- | -- | 0.0527 | -- | 21.54 | 40 | -- | -- |
| 83.81 | 0.427 | 8.57 | -- | -- | -- | -- | -- | -0.0129 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 49.14 | humidity | 80.0 | 30 | < th | dose dependent | rect. | 8 | 1 |
| 3 | 49.25 | humidity | 80.0 | 30 | < th | dose independent | rect. | 8 | 1 |
| 4 | 49.30 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 7 | 49.30 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 10 | 49.30 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 9 | 1 |
| 11 | 49.30 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 10 | 23 |
| 14 | 49.30 | radiation | 1.0 | 30 | > th | dose dependent | rect. | 8 | 1 |
| 16 | 49.34 | temperature | 25.0 | 30 | > th | dose independent | rect. | 8 | 1 |
| 17 | 49.40 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 8 | 1 |
| 19 | 49.42 | atmosphere | 1000.0 | 30 | > th | dose dependent | rect. | 8 | 1 |
| 20 | 49.43 | wind | 1.0 | 30 | > th | dose independent | rect. | 8 | 1 |
| 24 | 49.44 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 8 | 1 |
| 26 | 49.45 | radiation | 20.0 | 30 | > th | dose independent | rect. | 8 | 1 |
| 28 | 49.47 | wind | 5.0 | 30 | < th | dose independent | rect. | 8 | 1 |
| 31 | 49.50 | wind | 7.0 | 30 | < th | dose dependent | rect. | 8 | 1 |
| 36 | 49.53 | temperature | 10.0 | 30 | > th | dose independent | rect. | 8 | 1 |
| 38 | 49.53 | temperature | 30.0 | 30 | < th | dose independent | rect. | 8 | 1 |
| 39 | 49.53 | humidity | 50.0 | 30 | > th | dose independent | rect. | 8 | 1 |
| 42 | 49.53 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 8 | 1 |
| 45 | 49.53 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 8 | 1 |
| 46 | 49.53 | temperature | 10.0 | 30 | > th | dose independent | rect. | 9 | 23 |
| 48 | 49.53 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 8 | 1 |
| 51 | 49.64 | radiation | 30.0 | 30 | < th | dose independent | rect. | 8 | 1 |
| 54 | 49.73 | wind | 9.0 | 30 | < th | dose independent | rect. | 9 | 23 |
| 56 | 49.78 | wind | 1.0 | 30 | > th | dose dependent | rect. | 8 | 1 |
| 58 | 49.88 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 8 | 1 |
| 60 | 49.91 | radiation | 40.0 | 30 | < th | dose dependent | rect. | 8 | 1 |
| 61 | 50.02 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 2 |
| 65 | 50.03 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 6 |
| 66 | 50.03 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 8 |
| 67 | 50.03 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 10 |
| 75 | 50.16 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 8 | 1 |
| 77 | 50.20 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 90 | 50.37 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 12 | 7 |
| 94 | 50.43 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 15 | 3 |
| 111 | 50.56 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 131 | 50.62 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 17 | 5 |
| 172 | 50.81 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 179 | 50.82 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 8 | 1 |
| 209 | 50.90 | temperature | 20.0 | 1440 | > th | dose dependent | sin | 16 | NA |
| 288 | 50.98 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 21 | 20 |
| 294 | 50.99 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 21 | 18 |
| 295 | 50.99 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 21 |
| 311 | 51.02 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 357 | 51.10 | wind | 9.0 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 378 | 51.14 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 460 | 51.22 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 22 | 4 |
| 493 | 51.26 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 515 | 51.29 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 16 | 6 |
| 553 | 51.32 | temperature | 20.0 | 720 | > th | dose dependent | sin | 6 | NA |
| 560 | 51.32 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 3 | 21 |
| 569 | 51.33 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 4 | 19 |
| 593 | 51.35 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 13 | 16 |
| 620 | 51.37 | temperature | 20.0 | 1440 | > th | dose dependent | no | NA | NA |
| 621 | 51.37 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 6 |
| 678 | 51.39 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 7 | 22 |
| 681 | 51.40 | radiation | 1.0 | 14400 | < th | dose dependent | sin | 16 | NA |
| 699 | 51.41 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 16 | 6 |
| 704 | 51.41 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 17 | 2 |
| 706 | 51.41 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 13 | 6 |
| 784 | 51.44 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 7 | 12 |
| 810 | 51.45 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 14 | 8 |
| 834 | 51.46 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 20 | 3 |
| 869 | 51.47 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 10 | 23 |
| 873 | 51.48 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 4 | 2 |
| 888 | 51.49 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 919 | 51.50 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 941 | 51.51 | radiation | 1.0 | 14400 | < th | dose independent | sin | 16 | NA |
| 945 | 51.51 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 17 | 2 |
| 989 | 51.52 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 18 | 21 |
| 992 | 51.53 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 993 | 51.53 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 17 | 3 |