Os09g0546400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Auxin induced protein.
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Os09g0546400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Auxin induced protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 212.06 | 0.684 | 5.95 | -1.93 | 0.63 | -0.929 | 3.33 | -5.03 | -0.241 | 0.536 | 24.9 | 34 | -- | -- |
| 243.72 | 0.733 | 6.04 | -2.7 | 0.599 | -0.49 | 1.61 | -- | -0.39 | 23.5 | 24.9 | 34 | -- | -- |
| 235.7 | 0.715 | 5.9 | -1.89 | 0.425 | -0.235 | -- | -3.84 | -0.206 | 23.2 | 24.9 | 997 | -- | -- |
| 245.09 | 0.729 | 6 | -2.4 | 0.641 | 1.01 | -- | -- | -0.242 | 21.7 | 20 | 779 | -- | -- |
| 246.17 | 0.731 | 5.89 | -1.72 | -- | -0.45 | -- | -5.34 | -0.102 | -- | 55.08 | 964 | -- | -- |
| 247.37 | 0.737 | 6.02 | -2.58 | 0.517 | -- | 1.59 | -- | -0.296 | 23.4 | -- | -- | -- | -- |
| 257.04 | 0.751 | 6.02 | -2.64 | 0.537 | -- | -- | -- | -0.299 | 22.2 | -- | -- | -- | -- |
| 266.35 | 0.76 | 5.99 | -2.42 | -- | 1.08 | -- | -- | -0.218 | -- | 19.5 | 720 | -- | -- |
| 290.43 | 0.794 | 5.86 | -- | 0.556 | 2.07 | -- | -- | 0.437 | 22.3 | 20.57 | 47520 | -- | -- |
| 274.58 | 0.774 | 6.01 | -2.64 | -- | -- | -- | -- | -0.298 | -- | -- | -- | -- | -- |
| 441.3 | 0.983 | 5.96 | -- | 0.526 | -- | -- | -- | -0.00432 | 21.9 | -- | -- | -- | -- |
| 309.23 | 0.819 | 5.85 | -- | -- | 2.06 | -- | -- | 0.429 | -- | 20.42 | 47520 | -- | -- |
| 457.88 | 0.999 | 5.94 | -- | -- | -- | -- | -- | -0.00506 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 205.53 | temperature | 20.0 | 270 | > th | dose independent | rect. | 5 | 1 |
| 6 | 206.44 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 7 | 6 |
| 11 | 207.01 | temperature | 20.0 | 270 | > th | dose independent | rect. | 3 | 6 |
| 12 | 207.19 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 9 | 2 |
| 13 | 207.27 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 4 | 3 |
| 14 | 207.41 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 24 | 8 |
| 17 | 207.58 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 2 | 5 |
| 19 | 207.79 | wind | 3.0 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 20 | 207.86 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 10 | 20 |
| 30 | 208.09 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 34 | 208.19 | wind | 3.0 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 36 | 208.23 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 49 | 208.64 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 22 | 1 |
| 53 | 208.75 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 1 | 7 |
| 56 | 208.85 | temperature | 25.0 | 10 | < th | dose dependent | sin | 18 | NA |
| 57 | 208.87 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 1 | 5 |
| 58 | 208.87 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 21 | 13 |
| 61 | 208.92 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 21 | 5 |
| 66 | 208.96 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 21 | 7 |
| 67 | 208.96 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 11 | 15 |
| 73 | 209.01 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 7 |
| 85 | 209.14 | wind | 3.0 | 14400 | < th | dose independent | rect. | 23 | 9 |
| 105 | 209.26 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 18 | 10 |
| 139 | 209.53 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 7 |
| 152 | 209.64 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 153 | 209.64 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 7 | 1 |
| 200 | 210.00 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 10 |
| 201 | 210.00 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 10 |
| 213 | 210.11 | temperature | 20.0 | 720 | < th | dose independent | rect. | 5 | 2 |
| 227 | 210.24 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 1 | 10 |
| 270 | 210.55 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 5 | 3 |
| 273 | 210.55 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 5 | 3 |
| 275 | 210.56 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 10 |
| 310 | 210.75 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 8 | 6 |
| 320 | 210.87 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 7 | 8 |
| 333 | 210.95 | temperature | 15.0 | 720 | > th | dose dependent | sin | 9 | NA |
| 359 | 211.09 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 16 |
| 379 | 211.17 | temperature | 20.0 | 720 | < th | dose independent | rect. | 3 | 6 |
| 382 | 211.19 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 16 |
| 383 | 211.19 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 16 |
| 408 | 211.28 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 433 | 211.39 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 13 | 18 |
| 456 | 211.48 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 466 | 211.51 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 473 | 211.55 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 3 |
| 486 | 211.60 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 487 | 211.60 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 20 | 12 |
| 495 | 211.65 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 505 | 211.70 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 507 | 211.70 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 19 | 1 |
| 523 | 211.76 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 4 | 5 |
| 567 | 211.96 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 24 | 9 |
| 576 | 212.00 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 24 | 17 |
| 610 | 212.13 | temperature | 25.0 | 30 | < th | dose dependent | no | NA | NA |
| 615 | 212.15 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 4 | 23 |
| 617 | 212.16 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 618 | 212.16 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 621 | 212.17 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 627 | 212.20 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 631 | 212.21 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 636 | 212.24 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 644 | 212.27 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 22 | 11 |
| 672 | 212.38 | temperature | 20.0 | 270 | > th | dose independent | rect. | 3 | 14 |
| 673 | 212.38 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 689 | 212.48 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 5 | 3 |
| 708 | 212.58 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 5 | 3 |
| 792 | 212.95 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 3 | 15 |
| 849 | 213.14 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 9 | 5 |
| 871 | 213.23 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 2 | 6 |
| 901 | 213.34 | wind | 3.0 | 14400 | < th | dose independent | sin | 8 | NA |
| 975 | 213.51 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 12 | 1 |
| 981 | 213.52 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 986 | 213.54 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 987 | 213.54 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 7 | 1 |