Os09g0544000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Transferase family protein.
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Os09g0544000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Transferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 443.6 | 0.99 | 4.45 | -1.15 | 0.86 | 1.9 | 0.614 | 2.26 | -0.355 | 8.47 | 23.63 | 5262 | -- | -- |
| 450.13 | 0.988 | 4.39 | -0.33 | 0.798 | 1.97 | 0.689 | -- | -0.235 | 8.72 | 23.9 | 5243 | -- | -- |
| 444.67 | 0.982 | 4.46 | -1.15 | 0.864 | 1.9 | -- | 2.33 | -0.36 | 8.27 | 23.64 | 5260 | -- | -- |
| 450.71 | 0.989 | 4.37 | -0.324 | 0.888 | 2.04 | -- | -- | -0.179 | 8.3 | 24 | 5282 | -- | -- |
| 485.78 | 1.03 | 4.47 | -1.12 | -- | 1.95 | -- | 2.34 | -0.338 | -- | 23.65 | 5193 | -- | -- |
| 585.39 | 1.13 | 4.5 | -1.36 | 0.92 | -- | 1.02 | -- | -0.804 | 9.26 | -- | -- | -- | -- |
| 588.79 | 1.14 | 4.5 | -1.32 | 0.926 | -- | -- | -- | -0.805 | 8.95 | -- | -- | -- | -- |
| 488.33 | 1.03 | 4.4 | -0.65 | -- | 2.04 | -- | -- | -0.212 | -- | 25.9 | 2036 | -- | -- |
| 453.2 | 0.992 | 4.36 | -- | 0.882 | 2.14 | -- | -- | -0.103 | 8.17 | 24 | 5280 | -- | -- |
| 637.91 | 1.18 | 4.53 | -1.32 | -- | -- | -- | -- | -0.799 | -- | -- | -- | -- | -- |
| 634.83 | 1.18 | 4.47 | -- | 0.924 | -- | -- | -- | -0.658 | 9.06 | -- | -- | -- | -- |
| 493.21 | 1.03 | 4.36 | -- | -- | 2.2 | -- | -- | -0.0618 | -- | 23.97 | 5230 | -- | -- |
| 684.04 | 1.22 | 4.49 | -- | -- | -- | -- | -- | -0.652 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 438.90 | radiation | 1 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 3 | 439.50 | temperature | 25 | 4320 | > th | dose independent | rect. | 6 | 2 |
| 5 | 440.22 | temperature | 25 | 4320 | < th | dose independent | rect. | 6 | 2 |
| 7 | 441.44 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 22 |
| 10 | 441.69 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 19 |
| 13 | 442.52 | temperature | 20 | 4320 | > th | dose dependent | rect. | 4 | 1 |
| 14 | 442.53 | temperature | 20 | 4320 | > th | dose dependent | rect. | 3 | 4 |
| 66 | 447.83 | temperature | 20 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 74 | 448.25 | temperature | 20 | 14400 | < th | dose dependent | rect. | 21 | 8 |
| 111 | 449.58 | wind | 9 | 43200 | < th | dose independent | rect. | 10 | 7 |
| 131 | 449.99 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 19 |
| 137 | 450.14 | temperature | 20 | 4320 | > th | dose dependent | sin | 10 | NA |
| 144 | 450.29 | wind | 7 | 43200 | > th | dose dependent | rect. | 11 | 7 |
| 148 | 450.34 | wind | 9 | 43200 | > th | dose independent | rect. | 10 | 7 |
| 156 | 450.53 | wind | 7 | 43200 | > th | dose dependent | rect. | 11 | 5 |
| 175 | 450.97 | wind | 9 | 43200 | < th | dose independent | rect. | 11 | 10 |
| 178 | 451.07 | wind | 9 | 43200 | > th | dose independent | rect. | 11 | 10 |
| 189 | 451.34 | temperature | 20 | 14400 | < th | dose dependent | rect. | 23 | 2 |
| 211 | 451.67 | wind | 9 | 43200 | > th | dose independent | rect. | 11 | 12 |
| 231 | 452.08 | temperature | 15 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 233 | 452.11 | temperature | 20 | 14400 | < th | dose dependent | sin | 12 | NA |
| 239 | 452.16 | temperature | 20 | 4320 | > th | dose dependent | rect. | 17 | 6 |
| 275 | 452.68 | radiation | 1 | 1440 | > th | dose independent | rect. | 11 | 19 |
| 289 | 452.86 | temperature | 30 | 4320 | < th | dose dependent | rect. | 17 | 6 |
| 301 | 452.97 | temperature | 30 | 4320 | < th | dose dependent | rect. | 18 | 1 |
| 317 | 453.11 | radiation | 1 | 1440 | < th | dose dependent | rect. | 17 | 13 |
| 320 | 453.14 | wind | 9 | 43200 | < th | dose independent | rect. | 14 | 2 |
| 340 | 453.33 | temperature | 20 | 4320 | > th | dose dependent | rect. | 22 | 1 |
| 377 | 453.58 | wind | 9 | 43200 | > th | dose independent | rect. | 14 | 2 |
| 409 | 453.86 | temperature | 25 | 4320 | < th | dose independent | rect. | 16 | 7 |
| 433 | 454.01 | wind | 9 | 43200 | > th | dose dependent | rect. | 11 | 12 |
| 453 | 454.18 | temperature | 30 | 4320 | < th | dose dependent | rect. | 17 | 16 |
| 462 | 454.22 | wind | 9 | 43200 | > th | dose dependent | rect. | 11 | 10 |
| 534 | 454.58 | temperature | 30 | 4320 | < th | dose dependent | rect. | 17 | 10 |
| 547 | 454.64 | temperature | 25 | 4320 | > th | dose independent | rect. | 16 | 7 |
| 605 | 454.94 | radiation | 1 | 1440 | < th | dose dependent | sin | 14 | NA |
| 784 | 455.69 | temperature | 30 | 4320 | < th | dose dependent | sin | 14 | NA |
| 855 | 455.99 | temperature | 30 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 867 | 456.05 | temperature | 10 | 4320 | > th | dose dependent | rect. | 6 | 2 |
| 882 | 456.10 | temperature | 30 | 4320 | < th | dose dependent | rect. | 6 | 2 |
| 894 | 456.17 | temperature | 30 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 990 | 456.55 | temperature | 20 | 14400 | < th | dose independent | rect. | 1 | 2 |