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Os09g0543100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Phospholipase D nu-2 (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.62 (0.0232) R2 : 0.683
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.9 (0.0606) R2dC : 0.686 R2C : 0.683
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.00952 (0.0487) R2dN8 : 3.44e-05 R2N8 : -0.0036
σ : 0.437
deviance : 87.09
__
_____
C
peak time of C : 6.41
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
66.36 0.383 9.61 -0.592 1.88 0.782 0.663 0.0975 0.000979 6.63 74.74 1243 -- --
66.35 0.379 9.61 -0.597 1.89 0.794 0.679 -- 0.00139 6.64 74.36 1228 -- --
67.45 0.383 9.61 -0.581 1.88 0.786 -- 0.0952 0.00143 6.65 74.43 1237 -- --
67.45 0.383 9.61 -0.59 1.89 0.799 -- -- 0.00214 6.66 74.23 1228 -- --
249.34 0.735 9.66 -0.504 -- 0.922 -- 0.072 0.00428 -- 85.18 1333 -- --
80.62 0.421 9.63 -0.453 1.9 -- 0.726 -- -0.0567 6.37 -- -- -- --
81.91 0.424 9.63 -0.443 1.9 -- -- -- -0.0589 6.4 -- -- -- --
249.31 0.735 9.66 -0.527 -- 0.933 -- -- -0.00282 -- 84.26 1329 -- --
76.59 0.408 9.62 -- 1.9 0.75 -- -- 0.00718 6.63 82.56 1274 -- --
270.32 0.768 9.67 -0.394 -- -- -- -- -0.0185 -- -- -- -- --
87.09 0.437 9.62 -- 1.9 -- -- -- -0.00952 6.41 -- -- -- --
250.58 0.74 9.65 -- -- -0.949 -- -- 0.0323 -- 112 1333 -- --
274.41 0.773 9.66 -- -- -- -- -- 0.0252 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 66.85 humidity 70 1440 < th dose dependent rect. 15 19
3 67.09 humidity 70 1440 < th dose dependent sin 12 NA
5 67.12 wind 9 43200 > th dose dependent rect. 12 5
7 67.16 radiation 20 4320 > th dose dependent rect. 7 1
13 67.19 humidity 70 1440 < th dose dependent rect. 15 4
27 67.22 radiation 20 4320 > th dose independent rect. 7 1
74 67.34 wind 9 43200 > th dose independent rect. 12 5
82 67.49 wind 9 43200 < th dose independent rect. 12 5
98 67.54 wind 9 43200 > th dose dependent rect. 14 2
103 67.60 wind 9 43200 > th dose independent rect. 14 2
104 67.60 humidity 60 1440 > th dose independent rect. 15 19
109 67.65 humidity 60 1440 > th dose independent sin 12 NA
113 67.68 wind 9 43200 < th dose independent rect. 4 10
118 67.71 humidity 60 1440 > th dose independent rect. 14 5
122 67.74 wind 9 43200 > th dose independent rect. 11 9
126 67.76 humidity 60 1440 > th dose independent rect. 14 15
133 67.78 temperature 20 270 > th dose independent rect. 6 9
135 67.78 humidity 60 1440 > th dose independent rect. 14 13
141 67.79 wind 9 43200 > th dose independent rect. 19 19
144 67.80 wind 9 43200 < th dose independent rect. 11 9
145 67.80 humidity 60 1440 > th dose independent rect. 14 11
149 67.80 wind 9 43200 > th dose independent rect. 19 21
152 67.81 wind 9 43200 < th dose independent rect. 7 7
176 67.83 humidity 60 1440 < th dose independent rect. 15 19
187 67.89 wind 9 43200 < th dose independent rect. 20 18
215 67.92 wind 9 43200 < th dose independent rect. 19 21
220 67.94 humidity 60 1440 < th dose independent sin 12 NA
221 67.94 wind 9 43200 > th dose independent rect. 12 2
229 67.94 wind 9 43200 < th dose independent rect. 22 18
264 67.99 wind 9 43200 > th dose independent rect. 24 15
268 68.00 wind 9 43200 > th dose independent rect. 3 12
270 68.00 wind 9 43200 > th dose independent rect. 22 18
273 68.00 wind 7 43200 > th dose dependent rect. 24 16
275 68.01 humidity 60 14400 > th dose independent rect. 3 5
276 68.01 wind 9 43200 > th dose independent rect. 8 6
282 68.02 wind 3 43200 > th dose independent rect. 21 8
296 68.04 humidity 60 1440 < th dose independent rect. 14 5
307 68.05 wind 9 43200 < th dose independent rect. 11 3
326 68.07 wind 3 43200 < th dose independent rect. 21 8
345 68.08 wind 7 43200 > th dose dependent rect. 9 5
377 68.12 humidity 70 1440 < th dose dependent rect. 7 12
391 68.13 wind 3 43200 < th dose independent rect. 1 3
425 68.14 wind 3 43200 > th dose independent rect. 21 10
431 68.15 wind 3 43200 > th dose independent rect. 1 3
448 68.15 humidity 70 1440 < th dose dependent no NA NA
546 68.17 humidity 80 43200 < th dose dependent rect. 22 1
550 68.18 wind 7 43200 > th dose dependent rect. 5 9
552 68.19 radiation 30 4320 < th dose independent rect. 7 1
577 68.23 wind 9 43200 < th dose independent sin 3 NA
582 68.23 wind 9 43200 > th dose dependent rect. 11 9
586 68.24 wind 3 43200 < th dose independent rect. 2 1
587 68.24 humidity 50 1440 > th dose independent rect. 16 1
588 68.24 humidity 60 14400 > th dose independent rect. 5 3
589 68.24 wind 3 43200 > th dose independent rect. 23 6
608 68.26 wind 9 43200 > th dose independent rect. 11 11
615 68.26 wind 7 43200 > th dose dependent sin 3 NA
640 68.29 radiation 30 4320 < th dose independent rect. 24 8
711 68.36 radiation 20 14400 < th dose independent rect. 5 1
715 68.36 wind 9 43200 < th dose independent rect. 11 12
730 68.38 wind 7 43200 > th dose independent sin 3 NA
740 68.39 wind 7 4320 < th dose independent rect. 15 4
782 68.42 wind 7 4320 > th dose independent rect. 15 4
784 68.42 radiation 30 4320 < th dose independent rect. 2 6
792 68.42 wind 3 43200 > th dose dependent rect. 23 17
921 68.51 wind 9 43200 > th dose independent rect. 11 19
935 68.52 humidity 50 1440 < th dose independent rect. 16 1
954 68.53 wind 9 43200 < th dose independent rect. 11 19
967 68.54 humidity 70 720 < th dose independent rect. 17 15
993 68.56 humidity 70 720 < th dose independent rect. 17 3