Os09g0540400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Family II lipase EXL3.
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Os09g0540400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Family II lipase EXL3.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 189.07 | 0.646 | 5.68 | -4.3 | 1.13 | -0.666 | -0.101 | 3.06 | -0.848 | 12.3 | 28.65 | 271 | -- | -- |
| 198 | 0.655 | 5.62 | -3.76 | 1.18 | -0.884 | -0.476 | -- | -0.697 | 12.6 | 23.46 | 348 | -- | -- |
| 188.97 | 0.64 | 5.68 | -4.29 | 1.12 | -0.666 | -- | 3.07 | -0.85 | 12.3 | 28.61 | 234 | -- | -- |
| 199.22 | 0.657 | 5.62 | -3.77 | 1.19 | -0.874 | -- | -- | -0.69 | 12.5 | 23.5 | 354 | -- | -- |
| 244.27 | 0.732 | 5.72 | -4.35 | -- | -1.53 | -- | 2.3 | -0.988 | -- | 28.61 | 234 | -- | -- |
| 207.16 | 0.675 | 5.59 | -3.54 | 1.22 | -- | -0.591 | -- | -0.551 | 12.8 | -- | -- | -- | -- |
| 208.61 | 0.676 | 5.59 | -3.57 | 1.22 | -- | -- | -- | -0.554 | 12.8 | -- | -- | -- | -- |
| 250.97 | 0.741 | 5.68 | -3.96 | -- | -1.57 | -- | -- | -0.876 | -- | 29.5 | 15 | -- | -- |
| 519.68 | 1.06 | 5.47 | -- | 1.13 | 1.26 | -- | -- | 0.00394 | 13.6 | 45.39 | 809 | -- | -- |
| 302.08 | 0.812 | 5.61 | -3.61 | -- | -- | -- | -- | -0.576 | -- | -- | -- | -- | -- |
| 543.71 | 1.09 | 5.5 | -- | 1.28 | -- | -- | -- | -0.157 | 12.9 | -- | -- | -- | -- |
| 392.5 | 0.923 | 5.32 | -- | -- | 2.55 | -- | -- | 0.464 | -- | 25.18 | 47251 | -- | -- |
| 645.83 | 1.19 | 5.52 | -- | -- | -- | -- | -- | -0.176 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 183.87 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 5 |
| 2 | 184.04 | temperature | 30 | 270 | < th | dose dependent | sin | 5 | NA |
| 7 | 184.62 | temperature | 30 | 270 | < th | dose dependent | rect. | 3 | 8 |
| 15 | 185.13 | temperature | 25 | 270 | < th | dose dependent | rect. | 3 | 16 |
| 18 | 185.24 | temperature | 25 | 270 | < th | dose dependent | rect. | 3 | 13 |
| 29 | 185.55 | temperature | 25 | 270 | < th | dose dependent | rect. | 24 | 21 |
| 75 | 186.50 | humidity | 70 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 80 | 186.57 | humidity | 80 | 14400 | > th | dose dependent | rect. | 1 | 5 |
| 84 | 186.63 | temperature | 25 | 90 | < th | dose dependent | rect. | 6 | 15 |
| 102 | 186.82 | temperature | 25 | 90 | < th | dose dependent | rect. | 6 | 13 |
| 105 | 186.89 | temperature | 15 | 270 | > th | dose dependent | rect. | 20 | 22 |
| 117 | 187.01 | temperature | 25 | 90 | < th | dose dependent | rect. | 6 | 11 |
| 121 | 187.10 | humidity | 90 | 270 | < th | dose independent | rect. | 8 | 8 |
| 151 | 187.41 | atmosphere | 1010 | 270 | < th | dose independent | rect. | 8 | 7 |
| 161 | 187.55 | temperature | 25 | 270 | < th | dose dependent | rect. | 7 | 1 |
| 174 | 187.64 | temperature | 30 | 270 | < th | dose dependent | rect. | 14 | 22 |
| 184 | 187.72 | temperature | 30 | 10 | < th | dose dependent | rect. | 18 | 19 |
| 192 | 187.77 | temperature | 15 | 270 | > th | dose dependent | rect. | 2 | 12 |
| 213 | 187.89 | humidity | 90 | 14400 | < th | dose independent | rect. | 1 | 6 |
| 218 | 187.90 | wind | 7 | 1440 | < th | dose dependent | rect. | 1 | 3 |
| 222 | 187.92 | temperature | 10 | 270 | > th | dose dependent | sin | 5 | NA |
| 223 | 187.92 | wind | 1 | 1440 | > th | dose dependent | rect. | 1 | 3 |
| 248 | 188.14 | humidity | 90 | 14400 | > th | dose independent | rect. | 1 | 6 |
| 275 | 188.30 | temperature | 15 | 270 | > th | dose dependent | rect. | 21 | 17 |
| 310 | 188.59 | temperature | 10 | 270 | > th | dose dependent | sin | 2 | NA |
| 321 | 188.65 | humidity | 90 | 270 | < th | dose independent | sin | 0 | NA |
| 326 | 188.67 | temperature | 25 | 720 | < th | dose dependent | rect. | 20 | 16 |
| 333 | 188.69 | wind | 1 | 1440 | > th | dose dependent | rect. | 23 | 9 |
| 344 | 188.76 | temperature | 30 | 90 | < th | dose dependent | rect. | 18 | 23 |
| 346 | 188.77 | wind | 9 | 1440 | < th | dose dependent | rect. | 23 | 9 |
| 476 | 189.23 | temperature | 30 | 10 | < th | dose dependent | rect. | 18 | 22 |
| 486 | 189.26 | temperature | 25 | 720 | < th | dose dependent | sin | 9 | NA |
| 500 | 189.31 | temperature | 15 | 90 | > th | dose dependent | rect. | 8 | 23 |
| 536 | 189.45 | wind | 3 | 4320 | < th | dose independent | rect. | 2 | 1 |
| 537 | 189.45 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 554 | 189.49 | wind | 7 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 572 | 189.55 | temperature | 20 | 270 | > th | dose independent | rect. | 3 | 11 |
| 573 | 189.55 | humidity | 80 | 270 | > th | dose dependent | sin | 1 | NA |
| 595 | 189.62 | humidity | 80 | 270 | > th | dose dependent | rect. | 6 | 10 |
| 601 | 189.64 | temperature | 15 | 270 | > th | dose dependent | rect. | 6 | 9 |
| 626 | 189.69 | temperature | 15 | 270 | > th | dose dependent | rect. | 6 | 23 |
| 652 | 189.76 | temperature | 15 | 270 | > th | dose dependent | rect. | 8 | 7 |
| 663 | 189.79 | humidity | 90 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 736 | 189.97 | humidity | 90 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 815 | 190.14 | atmosphere | 1015 | 270 | < th | dose dependent | rect. | 9 | 6 |
| 860 | 190.23 | wind | 3 | 1440 | < th | dose independent | rect. | 1 | 4 |
| 869 | 190.24 | temperature | 30 | 270 | < th | dose dependent | rect. | 11 | 23 |
| 871 | 190.25 | humidity | 90 | 270 | > th | dose independent | sin | 0 | NA |
| 880 | 190.27 | wind | 5 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 894 | 190.29 | temperature | 15 | 270 | > th | dose dependent | no | NA | NA |
| 922 | 190.36 | wind | 7 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 930 | 190.36 | radiation | 1 | 270 | < th | dose dependent | rect. | 2 | 23 |
| 931 | 190.37 | radiation | 10 | 1440 | < th | dose dependent | rect. | 15 | 1 |
| 944 | 190.38 | humidity | 90 | 270 | > th | dose dependent | rect. | 7 | 3 |
| 947 | 190.39 | humidity | 90 | 14400 | > th | dose independent | rect. | 3 | 4 |
| 971 | 190.42 | humidity | 90 | 270 | > th | dose independent | rect. | 6 | 10 |
| 978 | 190.43 | humidity | 90 | 270 | > th | dose dependent | rect. | 6 | 6 |