Os09g0538900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os09g0538900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 313.28 | 0.832 | 6.54 | 0.229 | 2.79 | -1.69 | 1.03 | 0.972 | 0.258 | 1.47 | 21.9 | 799 | 2.04 | -- |
| 314.69 | 0.826 | 6.51 | 0.453 | 2.78 | -1.74 | 0.752 | -- | 0.294 | 1.52 | 21.89 | 781 | 1.38 | -- |
| 316.49 | 0.829 | 6.53 | 0.28 | 2.83 | -1.64 | -- | 0.668 | 0.283 | 1.49 | 21.9 | 783 | 1.8 | -- |
| 315.87 | 0.828 | 6.51 | 0.442 | 2.76 | -1.73 | -- | -- | 0.327 | 1.46 | 21.9 | 772 | 1.02 | -- |
| 379.2 | 0.907 | 6.33 | 0.71 | -- | -3.89 | -- | -0.0747 | 0.974 | -- | 30.9 | 1174 | 2.73 | -- |
| 403.5 | 0.942 | 6.43 | 0.897 | 3.22 | -- | 0.265 | -- | 0.764 | 1.08 | -- | -- | -- | -- |
| 403.79 | 0.941 | 6.43 | 0.887 | 3.22 | -- | -- | -- | 0.762 | 1.08 | -- | -- | -- | -- |
| 378.13 | 0.906 | 6.35 | 0.681 | -- | -3.77 | -- | -- | 0.931 | -- | 31.2 | 1143 | 2.48 | -- |
| 320.65 | 0.834 | 6.53 | -- | 2.73 | -1.86 | -- | -- | 0.256 | 1.48 | 21.88 | 778 | 0.804 | -- |
| 1045.55 | 1.51 | 6.38 | 1.01 | -- | -- | -- | -- | 0.826 | -- | -- | -- | -- | -- |
| 424.53 | 0.964 | 6.45 | -- | 3.23 | -- | -- | -- | 0.664 | 1.09 | -- | -- | -- | -- |
| 390.04 | 0.92 | 6.38 | -- | -- | -3.89 | -- | -- | 0.876 | -- | 30.8 | 1152 | 2.52 | -- |
| 1072.41 | 1.53 | 6.4 | -- | -- | -- | -- | -- | 0.714 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 314.04 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 23 | 13 |
| 3 | 314.31 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 24 | 11 |
| 16 | 317.01 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 24 | 20 |
| 18 | 317.14 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 22 | 13 |
| 36 | 318.91 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 24 | 5 |
| 41 | 319.21 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 3 | 17 |
| 42 | 319.23 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 3 | 4 |
| 57 | 319.93 | temperature | 20.0 | 720 | > th | dose dependent | sin | 8 | NA |
| 73 | 320.43 | temperature | 25.0 | 720 | < th | dose dependent | sin | 7 | NA |
| 81 | 320.58 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 5 | 8 |
| 257 | 325.96 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 3 | 1 |
| 271 | 326.40 | temperature | 20.0 | 720 | < th | dose independent | rect. | 3 | 4 |
| 391 | 329.30 | temperature | 20.0 | 720 | > th | dose independent | rect. | 24 | 5 |
| 417 | 330.00 | temperature | 20.0 | 720 | > th | dose independent | rect. | 24 | 11 |
| 423 | 330.09 | temperature | 20.0 | 720 | > th | dose independent | rect. | 23 | 13 |
| 432 | 330.36 | temperature | 20.0 | 720 | < th | dose independent | rect. | 23 | 8 |
| 462 | 330.96 | temperature | 20.0 | 720 | < th | dose independent | rect. | 22 | 11 |
| 468 | 331.06 | temperature | 25.0 | 270 | < th | dose independent | rect. | 6 | 7 |
| 509 | 331.85 | temperature | 20.0 | 720 | > th | dose independent | rect. | 3 | 2 |
| 539 | 332.67 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 5 | 19 |
| 573 | 333.35 | temperature | 20.0 | 720 | < th | dose independent | sin | 8 | NA |
| 670 | 334.70 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 9 | 1 |
| 692 | 335.03 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 693 | 335.03 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 699 | 335.16 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 7 | 2 |
| 724 | 335.52 | temperature | 20.0 | 720 | > th | dose independent | sin | 8 | NA |
| 756 | 335.95 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 758 | 335.95 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 774 | 336.09 | radiation | 40.0 | 30 | < th | dose independent | rect. | 3 | 17 |
| 887 | 337.22 | radiation | 40.0 | 30 | < th | dose dependent | rect. | 3 | 17 |