Os09g0536800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os09g0536800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 302.25 | 0.817 | 3.84 | -1.62 | 0.608 | 1.9 | 0.256 | -2.12 | -0.7 | 20.2 | 20.4 | 317 | -- | -- |
| 305.29 | 0.814 | 3.8 | -1.22 | 0.63 | 1.8 | -0.0151 | -- | -0.588 | 20 | 19.65 | 317 | -- | -- |
| 302.44 | 0.81 | 3.84 | -1.6 | 0.61 | 1.9 | -- | -2 | -0.693 | 20.1 | 20.38 | 317 | -- | -- |
| 305.27 | 0.814 | 3.79 | -1.22 | 0.636 | 1.78 | -- | -- | -0.586 | 20 | 19.67 | 320 | -- | -- |
| 314.23 | 0.826 | 3.85 | -1.78 | -- | 2.29 | -- | -2.99 | -0.79 | -- | 22.62 | 408 | -- | -- |
| 358.69 | 0.888 | 3.74 | -0.802 | 1.22 | -- | 0.156 | -- | -0.273 | 18.5 | -- | -- | -- | -- |
| 358.75 | 0.887 | 3.73 | -0.804 | 1.22 | -- | -- | -- | -0.273 | 18.5 | -- | -- | -- | -- |
| 320.26 | 0.833 | 3.79 | -1.3 | -- | 2.13 | -- | -- | -0.656 | -- | 20.4 | 409 | -- | -- |
| 340.78 | 0.86 | 3.75 | -- | 0.747 | 1.34 | -- | -- | -0.377 | 19.4 | 21.2 | 320 | -- | -- |
| 436.4 | 0.976 | 3.71 | -0.835 | -- | -- | -- | -- | -0.298 | -- | -- | -- | -- | -- |
| 375.8 | 0.907 | 3.71 | -- | 1.23 | -- | -- | -- | -0.183 | 18.5 | -- | -- | -- | -- |
| 359.05 | 0.883 | 3.73 | -- | -- | 1.8 | -- | -- | -0.377 | -- | 23.79 | 401 | -- | -- |
| 454.78 | 0.995 | 3.69 | -- | -- | -- | -- | -- | -0.206 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 288.18 | temperature | 20 | 90 | > th | dose dependent | rect. | 12 | 22 |
| 3 | 288.35 | temperature | 20 | 90 | > th | dose dependent | rect. | 12 | 16 |
| 5 | 290.43 | temperature | 20 | 90 | > th | dose dependent | rect. | 12 | 13 |
| 15 | 292.34 | temperature | 20 | 270 | > th | dose dependent | rect. | 20 | 21 |
| 20 | 293.41 | temperature | 20 | 270 | > th | dose dependent | rect. | 10 | 22 |
| 24 | 294.02 | temperature | 10 | 270 | > th | dose dependent | rect. | 11 | 14 |
| 102 | 297.36 | temperature | 20 | 270 | > th | dose dependent | rect. | 11 | 6 |
| 103 | 297.41 | temperature | 25 | 270 | > th | dose dependent | rect. | 12 | 4 |
| 226 | 300.75 | temperature | 20 | 270 | > th | dose dependent | sin | 22 | NA |
| 246 | 301.24 | temperature | 30 | 270 | < th | dose dependent | rect. | 4 | 19 |
| 271 | 301.58 | temperature | 30 | 270 | < th | dose dependent | rect. | 6 | 16 |
| 319 | 302.55 | temperature | 20 | 270 | > th | dose dependent | no | NA | NA |
| 328 | 302.74 | temperature | 20 | 90 | > th | dose dependent | sin | 19 | NA |
| 355 | 303.12 | temperature | 20 | 270 | > th | dose dependent | rect. | 2 | 23 |
| 364 | 303.18 | temperature | 20 | 270 | > th | dose dependent | rect. | 5 | 23 |
| 406 | 303.69 | temperature | 20 | 270 | > th | dose dependent | rect. | 23 | 23 |
| 602 | 306.25 | temperature | 30 | 270 | < th | dose dependent | sin | 21 | NA |
| 654 | 306.73 | temperature | 25 | 270 | < th | dose independent | rect. | 6 | 16 |
| 684 | 307.01 | temperature | 25 | 90 | > th | dose independent | rect. | 12 | 6 |
| 793 | 308.04 | temperature | 25 | 270 | > th | dose independent | rect. | 12 | 4 |
| 867 | 308.84 | atmosphere | 995 | 90 | > th | dose dependent | rect. | 17 | 19 |
| 872 | 308.89 | temperature | 30 | 270 | < th | dose dependent | rect. | 14 | 22 |
| 892 | 309.14 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 21 |
| 905 | 309.29 | temperature | 10 | 720 | > th | dose dependent | rect. | 5 | 10 |
| 933 | 309.50 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 10 |
| 934 | 309.50 | temperature | 20 | 1440 | > th | dose dependent | rect. | 19 | 14 |
| 936 | 309.54 | temperature | 20 | 1440 | > th | dose dependent | rect. | 19 | 9 |