Os09g0536700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Nodulin-like domain containing protein.
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Os09g0536700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Nodulin-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 207.39 | 0.677 | 11 | -1.93 | 2.54 | 2.14 | 0.475 | 1.4 | -0.216 | 17.6 | 19.5 | 268 | 12.1 | 16.8 |
| 215.97 | 0.684 | 11 | -2.02 | 2.53 | 2.12 | 1.04 | -- | -0.254 | 17.7 | 19.54 | 292 | 12 | 16.8 |
| 206.49 | 0.669 | 11 | -1.92 | 2.53 | 2.23 | -- | 1.61 | -0.236 | 17.4 | 19.58 | 289 | 12 | 16.7 |
| 217.95 | 0.688 | 11 | -2.14 | 2.46 | 2.19 | -- | -- | -0.266 | 17.5 | 19.5 | 284 | 12 | 16.6 |
| 303.09 | 0.811 | 10.8 | -1.84 | -- | 2.92 | -- | 2.03 | 0.0706 | -- | 19.44 | 246 | 11.7 | 14 |
| 336.54 | 0.86 | 11 | -1.54 | 3.56 | -- | 2.91 | -- | 0.0375 | 19.9 | -- | -- | -- | -- |
| 360.31 | 0.889 | 11 | -1.61 | 3.57 | -- | -- | -- | 0.0437 | 19.7 | -- | -- | -- | -- |
| 299.74 | 0.806 | 11 | -2.17 | -- | 3.01 | -- | -- | -0.242 | -- | 19.5 | 261 | 11.5 | 13.8 |
| 337.49 | 0.856 | 11 | -- | 2.39 | 2.03 | -- | -- | -0.08 | 17.8 | 20.1 | 283 | 12.1 | 16.4 |
| 1049.3 | 1.51 | 10.9 | -1.65 | -- | -- | -- | -- | -0.00779 | -- | -- | -- | -- | -- |
| 428.42 | 0.968 | 11 | -- | 3.59 | -- | -- | -- | 0.223 | 19.7 | -- | -- | -- | -- |
| 425.55 | 0.961 | 11 | -- | -- | 2.83 | -- | -- | -0.0176 | -- | 19.4 | 251 | 11.7 | 13.6 |
| 1121.38 | 1.56 | 10.9 | -- | -- | -- | -- | -- | 0.176 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 214.64 | temperature | 20.0 | 270 | > th | dose independent | rect. | 12 | 17 |
| 17 | 235.08 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 22 | 9 |
| 23 | 238.42 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 12 | 17 |
| 25 | 238.82 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 18 | 17 |
| 26 | 238.82 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 18 | 17 |
| 31 | 240.60 | temperature | 20.0 | 10 | > th | dose independent | rect. | 13 | 19 |
| 32 | 240.68 | wind | 7.0 | 270 | < th | dose independent | rect. | 18 | 17 |
| 33 | 240.72 | radiation | 1.0 | 270 | > th | dose independent | rect. | 4 | 8 |
| 59 | 243.35 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 22 | 9 |
| 62 | 243.59 | wind | 1.0 | 270 | > th | dose independent | rect. | 11 | 7 |
| 64 | 243.77 | temperature | 10.0 | 270 | > th | dose independent | rect. | 11 | 7 |
| 65 | 243.77 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 11 | 7 |
| 66 | 243.77 | temperature | 10.0 | 270 | > th | dose independent | rect. | 18 | 17 |
| 67 | 243.88 | temperature | 20.0 | 270 | > th | dose independent | rect. | 22 | 8 |
| 70 | 243.95 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 18 | 17 |
| 72 | 244.15 | temperature | 20.0 | 270 | > th | dose independent | rect. | 11 | 8 |
| 73 | 244.15 | humidity | 50.0 | 270 | > th | dose independent | rect. | 18 | 17 |
| 83 | 245.46 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 11 | 7 |
| 84 | 245.46 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 11 | 7 |
| 88 | 245.76 | wind | 9.0 | 270 | < th | dose independent | rect. | 11 | 7 |
| 97 | 245.79 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 15 |
| 101 | 245.79 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 15 |
| 112 | 246.51 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 7 |
| 113 | 246.51 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 7 |
| 116 | 246.76 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 7 |
| 130 | 246.97 | temperature | 15.0 | 270 | > th | dose independent | rect. | 5 | 7 |
| 134 | 247.04 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 5 | 7 |
| 135 | 247.04 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 5 | 7 |
| 136 | 247.04 | temperature | 10.0 | 270 | > th | dose independent | rect. | 12 | 17 |
| 141 | 247.55 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 15 |
| 143 | 247.70 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 22 | 9 |
| 147 | 247.92 | temperature | 20.0 | 270 | > th | dose independent | rect. | 7 | 4 |
| 149 | 247.96 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 22 | 9 |
| 154 | 248.22 | wind | 9.0 | 270 | < th | dose independent | rect. | 12 | 17 |
| 160 | 248.49 | temperature | 15.0 | 270 | > th | dose independent | rect. | 7 | 15 |
| 162 | 248.54 | humidity | 70.0 | 270 | > th | dose independent | rect. | 22 | 9 |
| 165 | 248.56 | temperature | 10.0 | 270 | > th | dose independent | rect. | 22 | 9 |
| 166 | 248.56 | temperature | 30.0 | 270 | < th | dose independent | rect. | 22 | 9 |
| 167 | 248.56 | humidity | 50.0 | 270 | > th | dose independent | rect. | 22 | 9 |
| 169 | 248.56 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 22 | 9 |
| 170 | 248.56 | radiation | 30.0 | 270 | < th | dose independent | rect. | 22 | 9 |
| 176 | 248.68 | wind | 9.0 | 270 | < th | dose independent | rect. | 22 | 9 |
| 189 | 248.96 | radiation | 1.0 | 270 | > th | dose independent | rect. | 11 | 8 |
| 202 | 249.10 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 11 | 7 |
| 204 | 249.17 | radiation | 1.0 | 270 | > th | dose independent | sin | 6 | NA |
| 206 | 249.32 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 12 | 17 |
| 235 | 249.91 | humidity | 50.0 | 270 | > th | dose independent | rect. | 5 | 7 |
| 246 | 250.56 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 5 | 7 |
| 262 | 251.10 | humidity | 90.0 | 270 | < th | dose independent | rect. | 11 | 7 |
| 267 | 251.36 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 16 | 8 |
| 270 | 251.40 | temperature | 30.0 | 270 | < th | dose independent | rect. | 18 | 17 |
| 274 | 251.43 | radiation | 20.0 | 270 | < th | dose independent | rect. | 16 | 8 |
| 275 | 251.46 | wind | 1.0 | 270 | > th | dose independent | rect. | 5 | 7 |
| 293 | 251.76 | wind | 7.0 | 270 | < th | dose independent | rect. | 7 | 4 |
| 295 | 251.84 | wind | 1.0 | 270 | > th | dose independent | rect. | 18 | 17 |
| 306 | 252.33 | temperature | 20.0 | 90 | < th | dose independent | rect. | 17 | 13 |
| 307 | 252.38 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 4 |
| 309 | 252.38 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 4 |
| 319 | 252.49 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 4 |
| 323 | 252.51 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 4 |
| 324 | 252.51 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 4 |
| 326 | 252.51 | temperature | 10.0 | 270 | > th | dose independent | rect. | 11 | 20 |
| 328 | 252.56 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 7 | 4 |
| 331 | 252.68 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 7 |
| 332 | 252.68 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 7 |
| 353 | 253.25 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 4 |
| 359 | 253.54 | wind | 9.0 | 270 | < th | dose independent | rect. | 17 | 7 |
| 360 | 253.62 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 24 | 17 |
| 365 | 253.68 | temperature | 10.0 | 270 | > th | dose independent | rect. | 17 | 7 |
| 369 | 253.68 | temperature | 10.0 | 270 | > th | dose independent | rect. | 24 | 17 |
| 374 | 253.78 | wind | 9.0 | 270 | < th | dose independent | rect. | 11 | 20 |
| 381 | 253.93 | humidity | 50.0 | 270 | > th | dose independent | rect. | 17 | 7 |
| 383 | 253.94 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 1 | 8 |
| 388 | 254.03 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 18 | 8 |
| 407 | 254.29 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 12 | 17 |
| 410 | 254.35 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 22 | 9 |
| 411 | 254.35 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 11 | 7 |
| 412 | 254.35 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 22 | 9 |
| 423 | 254.58 | radiation | 1.0 | 270 | < th | dose independent | sin | 6 | NA |
| 467 | 255.37 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 17 | 7 |
| 470 | 255.40 | radiation | 1.0 | 270 | < th | dose independent | rect. | 23 | 16 |
| 484 | 255.79 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 24 | 16 |
| 489 | 255.88 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 11 | 20 |
| 497 | 256.07 | temperature | 20.0 | 10 | < th | dose independent | rect. | 17 | 13 |
| 499 | 256.12 | wind | 9.0 | 270 | < th | dose dependent | rect. | 6 | 6 |
| 500 | 256.13 | temperature | 20.0 | 10 | < th | dose independent | rect. | 17 | 15 |
| 504 | 256.15 | wind | 9.0 | 270 | < th | dose dependent | rect. | 7 | 4 |
| 506 | 256.17 | wind | 9.0 | 270 | < th | dose independent | rect. | 24 | 17 |
| 518 | 256.31 | temperature | 20.0 | 90 | < th | dose independent | sin | 11 | NA |
| 528 | 256.37 | radiation | 1.0 | 270 | < th | dose dependent | sin | 6 | NA |
| 539 | 256.55 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 14 | 18 |
| 545 | 256.59 | humidity | 90.0 | 90 | < th | dose independent | rect. | 7 | 6 |
| 572 | 256.93 | wind | 1.0 | 270 | > th | dose independent | rect. | 17 | 7 |
| 583 | 257.00 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 12 | 17 |
| 584 | 257.00 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 12 | 17 |
| 587 | 257.06 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 24 | 9 |
| 595 | 257.14 | wind | 1.0 | 270 | > th | dose independent | rect. | 12 | 17 |
| 614 | 257.39 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 16 | 8 |
| 679 | 257.78 | humidity | 80.0 | 90 | > th | dose independent | rect. | 1 | 8 |
| 680 | 257.84 | temperature | 20.0 | 10 | < th | dose independent | sin | 11 | NA |
| 722 | 258.18 | temperature | 20.0 | 90 | > th | dose independent | rect. | 24 | 19 |
| 728 | 258.27 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 12 | 5 |
| 783 | 258.78 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 24 | 17 |
| 784 | 258.78 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 24 | 17 |
| 799 | 259.06 | temperature | 30.0 | 270 | < th | dose independent | rect. | 17 | 7 |
| 841 | 259.42 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 23 | 16 |
| 880 | 259.94 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 11 | 20 |
| 918 | 260.28 | radiation | 40.0 | 90 | < th | dose independent | rect. | 13 | 18 |
| 971 | 260.54 | radiation | 40.0 | 270 | < th | dose independent | rect. | 18 | 17 |