Os09g0534600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Heat shock protein 82.
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Os09g0534600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Heat shock protein 82.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 185.91 | 0.641 | 5.44 | -2.29 | 0.651 | -1.09 | -0.567 | 0.173 | -0.00376 | 2.88 | 26 | 1500 | -- | -- |
| 185.94 | 0.635 | 5.44 | -2.26 | 0.654 | -1.11 | -0.578 | -- | 0.00106 | 2.89 | 26 | 1518 | -- | -- |
| 186.9 | 0.637 | 5.44 | -2.31 | 0.634 | -1.07 | -- | 0.385 | -0.00895 | 3.07 | 26.01 | 1410 | -- | -- |
| 186.98 | 0.637 | 5.43 | -2.25 | 0.65 | -1.1 | -- | -- | 0.0057 | 3.1 | 25.99 | 1500 | -- | -- |
| 208.45 | 0.672 | 5.46 | -2.47 | -- | -1.06 | -- | 0.671 | -0.00952 | -- | 31.62 | 2528 | -- | -- |
| 202.78 | 0.668 | 5.38 | -1.92 | 0.679 | -- | -0.574 | -- | 0.247 | 2.93 | -- | -- | -- | -- |
| 203.83 | 0.669 | 5.38 | -1.91 | 0.68 | -- | -- | -- | 0.25 | 3.11 | -- | -- | -- | -- |
| 206.33 | 0.669 | 5.42 | -2.24 | -- | -1.19 | -- | -- | 0.0575 | -- | 43.07 | 1151 | -- | -- |
| 299.9 | 0.811 | 5.33 | -- | 0.672 | -0.109 | -- | -- | 0.442 | 3.05 | 26.96 | 371 | -- | -- |
| 230.25 | 0.709 | 5.38 | -1.88 | -- | -- | -- | -- | 0.268 | -- | -- | -- | -- | -- |
| 300.1 | 0.81 | 5.33 | -- | 0.643 | -- | -- | -- | 0.463 | 3.1 | -- | -- | -- | -- |
| 317.21 | 0.832 | 5.31 | -- | -- | 0.642 | -- | -- | 0.55 | -- | 34.35 | 1117 | -- | -- |
| 323.69 | 0.84 | 5.33 | -- | -- | -- | -- | -- | 0.476 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 179.86 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 10 | 8 |
| 6 | 181.41 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 10 | 8 |
| 7 | 181.57 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 17 | 1 |
| 9 | 181.80 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 14 | 4 |
| 16 | 182.20 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 18 | 182.38 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 13 | 7 |
| 34 | 182.98 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 14 | 4 |
| 97 | 183.55 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 16 | 4 |
| 103 | 183.57 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 16 | 13 |
| 149 | 183.88 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 10 | 8 |
| 181 | 184.10 | wind | 9.0 | 43200 | > th | dose independent | rect. | 16 | 11 |
| 190 | 184.20 | wind | 9.0 | 43200 | < th | dose independent | rect. | 15 | 12 |
| 200 | 184.26 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 17 | 1 |
| 206 | 184.31 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 9 | 9 |
| 207 | 184.31 | temperature | 25.0 | 1440 | < th | dose dependent | sin | 20 | NA |
| 208 | 184.31 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 9 | 9 |
| 252 | 184.49 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 9 | 9 |
| 287 | 184.58 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 15 | 12 |
| 294 | 184.61 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 16 | 2 |
| 299 | 184.62 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 4 | 16 |
| 306 | 184.65 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 16 | 2 |
| 308 | 184.65 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 15 | 9 |
| 319 | 184.67 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 8 | 21 |
| 323 | 184.67 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 14 | 17 |
| 333 | 184.71 | radiation | 40.0 | 1440 | < th | dose dependent | rect. | 17 | 3 |
| 342 | 184.74 | temperature | 10.0 | 1440 | > th | dose dependent | sin | 18 | NA |
| 346 | 184.75 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 8 | 11 |
| 371 | 184.79 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 17 | 13 |
| 373 | 184.80 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 8 | 16 |
| 378 | 184.81 | wind | 5.0 | 43200 | > th | dose independent | rect. | 19 | 5 |
| 401 | 184.86 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 20 | 3 |
| 415 | 184.88 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 426 | 184.90 | wind | 9.0 | 43200 | < th | dose independent | sin | 14 | NA |
| 427 | 184.90 | wind | 5.0 | 43200 | < th | dose independent | rect. | 19 | 5 |
| 428 | 184.90 | wind | 9.0 | 43200 | > th | dose independent | rect. | 14 | 17 |
| 435 | 184.91 | wind | 9.0 | 43200 | > th | dose independent | sin | 14 | NA |
| 443 | 184.92 | radiation | 10.0 | 1440 | < th | dose dependent | sin | 16 | NA |
| 462 | 184.95 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 14 | 15 |
| 478 | 184.97 | radiation | 1.0 | 1440 | < th | dose independent | sin | 16 | NA |
| 515 | 185.02 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 15 | 5 |
| 572 | 185.08 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 14 | 10 |
| 639 | 185.16 | wind | 7.0 | 43200 | > th | dose dependent | sin | 14 | NA |
| 643 | 185.16 | radiation | 40.0 | 1440 | < th | dose dependent | rect. | 17 | 11 |
| 648 | 185.17 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 8 | 21 |
| 670 | 185.19 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 17 | 16 |
| 725 | 185.28 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 8 | 11 |
| 778 | 185.33 | radiation | 40.0 | 1440 | < th | dose dependent | rect. | 17 | 7 |
| 820 | 185.38 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 15 | 4 |
| 918 | 185.48 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 17 | 1 |
| 960 | 185.52 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 17 | 12 |
| 980 | 185.54 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 17 | 3 |
| 982 | 185.54 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 14 | 15 |