Os09g0533300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Phosphoesterase At2g46880 family protein.
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Os09g0533300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Phosphoesterase At2g46880 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 57.53 | 0.356 | 10.6 | 1.76 | 1.1 | -0.086 | 0.0581 | 3.71 | 0.225 | 0.712 | 29.9 | 396 | -- | -- |
| 60.52 | 0.365 | 10.7 | 1.45 | 1.12 | 0.139 | 0.0227 | -- | 0.178 | 0.491 | 29.9 | 396 | -- | -- |
| 57.53 | 0.353 | 10.6 | 1.76 | 1.11 | -0.0974 | -- | 3.88 | 0.219 | 0.726 | 29.9 | 397 | -- | -- |
| 58.45 | 0.356 | 10.7 | 1.42 | 1.11 | 0.37 | -- | -- | 0.204 | 0.755 | 30.9 | 395 | -- | -- |
| 128.92 | 0.529 | 10.6 | 1.88 | -- | 0.0902 | -- | 3.36 | 0.268 | -- | 29.99 | 897 | -- | -- |
| 61.22 | 0.367 | 10.7 | 1.46 | 1.09 | -- | 0.00572 | -- | 0.176 | 0.394 | -- | -- | -- | -- |
| 61.22 | 0.366 | 10.7 | 1.46 | 1.09 | -- | -- | -- | 0.176 | 0.394 | -- | -- | -- | -- |
| 128.63 | 0.531 | 10.7 | 1.56 | -- | -0.377 | -- | -- | 0.198 | -- | 29.6 | 1030 | -- | -- |
| 110.79 | 0.49 | 10.7 | -- | 1.14 | 0.608 | -- | -- | 0.0729 | 1 | 31.2 | 457 | -- | -- |
| 135.98 | 0.545 | 10.7 | 1.5 | -- | -- | -- | -- | 0.193 | -- | -- | -- | -- | -- |
| 117.72 | 0.508 | 10.7 | -- | 1.11 | -- | -- | -- | 0.0126 | 0.462 | -- | -- | -- | -- |
| 166.48 | 0.601 | 10.7 | -- | -- | 0.93 | -- | -- | -0.115 | -- | 27.56 | 1018 | -- | -- |
| 195.42 | 0.652 | 10.7 | -- | -- | -- | -- | -- | 0.0268 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 56.46 | wind | 1 | 10 | > th | dose dependent | rect. | 4 | 1 |
| 2 | 56.49 | temperature | 30 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 3 | 56.49 | temperature | 30 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 6 | 56.50 | radiation | 20 | 720 | < th | dose independent | rect. | 21 | 12 |
| 8 | 56.52 | temperature | 30 | 14400 | > th | dose independent | rect. | 11 | 4 |
| 11 | 56.55 | temperature | 25 | 10 | > th | dose independent | rect. | 4 | 1 |
| 15 | 56.58 | temperature | 25 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 26 | 56.62 | humidity | 90 | 10 | < th | dose independent | rect. | 4 | 1 |
| 33 | 56.64 | wind | 1 | 90 | > th | dose independent | rect. | 4 | 1 |
| 42 | 56.67 | temperature | 30 | 14400 | < th | dose independent | rect. | 4 | 11 |
| 46 | 56.67 | temperature | 30 | 14400 | < th | dose independent | rect. | 20 | 19 |
| 206 | 56.74 | temperature | 30 | 14400 | < th | dose independent | sin | 23 | NA |
| 213 | 56.75 | temperature | 30 | 14400 | > th | dose independent | sin | 23 | NA |
| 278 | 56.78 | temperature | 30 | 14400 | < th | dose independent | no | NA | NA |
| 371 | 56.79 | temperature | 30 | 14400 | > th | dose independent | no | NA | NA |
| 553 | 56.82 | temperature | 25 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 556 | 56.83 | temperature | 30 | 14400 | > th | dose independent | rect. | 14 | 23 |
| 557 | 56.83 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 23 |
| 563 | 56.85 | temperature | 30 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 634 | 56.88 | wind | 1 | 90 | > th | dose independent | rect. | 24 | 21 |
| 657 | 56.92 | temperature | 30 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 658 | 56.92 | temperature | 25 | 14400 | < th | dose independent | rect. | 6 | 3 |
| 660 | 56.92 | temperature | 30 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 663 | 56.93 | temperature | 25 | 14400 | > th | dose independent | rect. | 6 | 3 |
| 679 | 56.96 | wind | 1 | 10 | > th | dose independent | rect. | 4 | 1 |
| 688 | 56.97 | atmosphere | 1005 | 30 | > th | dose independent | rect. | 22 | 21 |
| 700 | 56.98 | temperature | 25 | 720 | > th | dose dependent | rect. | 5 | 4 |
| 740 | 57.00 | temperature | 25 | 14400 | > th | dose dependent | sin | 7 | NA |
| 801 | 57.05 | temperature | 25 | 720 | > th | dose dependent | rect. | 8 | 1 |
| 812 | 57.06 | radiation | 20 | 720 | < th | dose independent | rect. | 7 | 2 |
| 838 | 57.07 | temperature | 25 | 14400 | > th | dose dependent | rect. | 14 | 21 |
| 877 | 57.09 | temperature | 25 | 14400 | > th | dose dependent | rect. | 6 | 14 |
| 931 | 57.10 | atmosphere | 1005 | 10 | > th | dose independent | rect. | 22 | 2 |
| 947 | 57.10 | temperature | 25 | 14400 | > th | dose dependent | no | NA | NA |