Os09g0533100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Pantothenate kinase 4 (Fragment).
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Os09g0533100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Pantothenate kinase 4 (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 32.28 | 0.267 | 12.2 | -0.705 | 0.538 | -0.562 | 0.306 | 0.207 | -0.334 | 17.3 | 8.765 | 108 | -- | -- |
| 32.44 | 0.265 | 12.2 | -0.707 | 0.511 | -0.597 | 0.238 | -- | -0.337 | 17.6 | 8.423 | 115 | -- | -- |
| 32.45 | 0.265 | 12.2 | -0.708 | 0.515 | -0.597 | -- | 0.164 | -0.333 | 17.6 | 8.312 | 115 | -- | -- |
| 32.58 | 0.266 | 12.2 | -0.711 | 0.516 | -0.586 | -- | -- | -0.333 | 17.5 | 8.245 | 115 | -- | -- |
| 37.34 | 0.285 | 12.2 | -0.754 | -- | -0.805 | -- | 0.0594 | -0.344 | -- | 5.7 | 291 | -- | -- |
| 37.03 | 0.285 | 12.2 | -0.707 | 0.968 | -- | 0.07 | -- | -0.305 | 14.8 | -- | -- | -- | -- |
| 37.05 | 0.285 | 12.2 | -0.705 | 0.968 | -- | -- | -- | -0.304 | 14.8 | -- | -- | -- | -- |
| 37.35 | 0.285 | 12.2 | -0.746 | -- | -0.807 | -- | -- | -0.337 | -- | 5.651 | 291 | -- | -- |
| 45.8 | 0.315 | 12.2 | -- | 0.551 | -0.561 | -- | -- | -0.252 | 17.2 | 10 | 107 | -- | -- |
| 91.33 | 0.447 | 12.2 | -0.747 | -- | -- | -- | -- | -0.329 | -- | -- | -- | -- | -- |
| 50.17 | 0.331 | 12.2 | -- | 0.982 | -- | -- | -- | -0.226 | 14.8 | -- | -- | -- | -- |
| 51.76 | 0.335 | 12.2 | -- | -- | -0.818 | -- | -- | -0.249 | -- | 8.234 | 291 | -- | -- |
| 106.04 | 0.481 | 12.2 | -- | -- | -- | -- | -- | -0.246 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 28.46 | wind | 9.0 | 90 | < th | dose dependent | rect. | 6 | 21 |
| 2 | 28.47 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 6 | 21 |
| 4 | 28.59 | wind | 7.0 | 10 | < th | dose independent | rect. | 6 | 21 |
| 6 | 28.72 | wind | 7.0 | 90 | < th | dose independent | rect. | 6 | 21 |
| 9 | 29.01 | temperature | 25.0 | 90 | < th | dose independent | rect. | 3 | 3 |
| 17 | 29.30 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 3 | 3 |
| 19 | 29.30 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 3 | 3 |
| 20 | 29.30 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 3 | 8 |
| 21 | 29.31 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 3 | 10 |
| 22 | 29.33 | wind | 7.0 | 30 | < th | dose dependent | rect. | 3 | 3 |
| 40 | 29.47 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 3 |
| 46 | 29.54 | wind | 5.0 | 90 | < th | dose independent | rect. | 3 | 3 |
| 49 | 29.56 | temperature | 10.0 | 90 | > th | dose independent | rect. | 3 | 3 |
| 52 | 29.56 | humidity | 50.0 | 90 | > th | dose independent | rect. | 3 | 3 |
| 55 | 29.56 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 3 | 3 |
| 56 | 29.56 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 3 | 3 |
| 58 | 29.56 | radiation | 20.0 | 90 | < th | dose independent | rect. | 3 | 3 |
| 61 | 29.56 | temperature | 10.0 | 90 | > th | dose independent | rect. | 6 | 21 |
| 62 | 29.56 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 3 | 3 |
| 68 | 29.61 | wind | 7.0 | 10 | < th | dose independent | rect. | 3 | 3 |
| 75 | 29.63 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 24 | 3 |
| 78 | 29.64 | temperature | 10.0 | 10 | > th | dose independent | rect. | 3 | 3 |
| 82 | 29.64 | temperature | 30.0 | 10 | < th | dose independent | rect. | 3 | 3 |
| 84 | 29.64 | humidity | 50.0 | 10 | > th | dose independent | rect. | 3 | 3 |
| 90 | 29.64 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 3 | 3 |
| 92 | 29.64 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 3 | 3 |
| 96 | 29.64 | radiation | 20.0 | 10 | < th | dose independent | rect. | 3 | 3 |
| 102 | 29.64 | temperature | 10.0 | 10 | > th | dose independent | rect. | 6 | 21 |
| 105 | 29.66 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 6 | 21 |
| 106 | 29.66 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 6 | 21 |
| 115 | 29.72 | temperature | 25.0 | 90 | < th | dose independent | rect. | 3 | 14 |
| 124 | 29.79 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 3 | 3 |
| 129 | 29.83 | temperature | 25.0 | 90 | < th | dose independent | rect. | 3 | 8 |
| 155 | 29.96 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 3 | 3 |
| 168 | 30.00 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 3 | 3 |
| 220 | 30.19 | radiation | 1.0 | 90 | < th | dose independent | rect. | 3 | 12 |
| 251 | 30.24 | radiation | 1.0 | 90 | < th | dose independent | rect. | 3 | 8 |
| 267 | 30.27 | wind | 1.0 | 270 | > th | dose independent | rect. | 1 | 3 |
| 281 | 30.31 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 3 |
| 306 | 30.36 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 3 | 16 |
| 317 | 30.37 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 3 |
| 323 | 30.37 | temperature | 10.0 | 270 | > th | dose independent | rect. | 4 | 21 |
| 324 | 30.37 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 1 | 3 |
| 338 | 30.40 | wind | 1.0 | 270 | > th | dose independent | rect. | 2 | 1 |
| 341 | 30.40 | wind | 9.0 | 90 | < th | dose dependent | rect. | 6 | 9 |
| 356 | 30.44 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 6 | 21 |
| 401 | 30.48 | temperature | 25.0 | 90 | > th | dose independent | rect. | 23 | 12 |
| 407 | 30.50 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 4 | 21 |
| 410 | 30.50 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 4 | 21 |
| 444 | 30.56 | wind | 9.0 | 90 | < th | dose dependent | rect. | 6 | 11 |
| 449 | 30.57 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 3 | 13 |
| 453 | 30.59 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 3 | 3 |
| 461 | 30.61 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 13 | 10 |
| 465 | 30.62 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 4 | 2 |
| 472 | 30.63 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 6 | 21 |
| 486 | 30.66 | wind | 9.0 | 10 | < th | dose dependent | rect. | 6 | 9 |
| 555 | 30.72 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 24 | 21 |
| 576 | 30.74 | wind | 9.0 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 577 | 30.74 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 3 |
| 580 | 30.74 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 584 | 30.74 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 4 | 3 |
| 589 | 30.74 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 4 | 3 |
| 590 | 30.74 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 591 | 30.74 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 597 | 30.74 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 7 | 21 |
| 606 | 30.74 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 3 | 10 |
| 643 | 30.77 | wind | 9.0 | 90 | < th | dose dependent | rect. | 6 | 7 |
| 650 | 30.78 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 660 | 30.79 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 6 | 5 |
| 665 | 30.80 | wind | 5.0 | 90 | < th | dose independent | rect. | 6 | 9 |
| 666 | 30.80 | humidity | 90.0 | 90 | > th | dose independent | rect. | 3 | 9 |
| 683 | 30.82 | radiation | 20.0 | 30 | < th | dose dependent | rect. | 3 | 20 |
| 742 | 30.87 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 3 | 20 |
| 746 | 30.88 | wind | 5.0 | 10 | < th | dose independent | rect. | 6 | 9 |
| 790 | 30.93 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 22 | 5 |
| 828 | 30.96 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 13 |
| 841 | 30.96 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 13 |
| 854 | 30.97 | radiation | 10.0 | 90 | < th | dose dependent | sin | 4 | NA |
| 873 | 30.99 | wind | 5.0 | 90 | < th | dose independent | rect. | 6 | 7 |
| 912 | 31.01 | humidity | 90.0 | 90 | > th | dose independent | rect. | 3 | 14 |
| 934 | 31.03 | wind | 5.0 | 90 | < th | dose independent | rect. | 6 | 11 |
| 936 | 31.03 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 6 | 3 |
| 978 | 31.05 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 4 | 2 |