Os09g0532900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Myb, DNA-binding domain containing protein.
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Os09g0532900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Myb, DNA-binding domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 309.33 | 0.826 | 6.29 | -3.79 | 1.91 | -2.95 | -0.0725 | 1.5 | 0.0557 | 7.12 | 24.51 | 334 | -- | -- |
| 310.56 | 0.821 | 6.26 | -3.56 | 1.91 | -3.14 | 0.18 | -- | 0.115 | 7.22 | 24.21 | 368 | -- | -- |
| 308.92 | 0.819 | 6.29 | -3.79 | 1.9 | -2.93 | -- | 1.58 | 0.0691 | 7.13 | 24.39 | 349 | -- | -- |
| 310.61 | 0.821 | 6.26 | -3.57 | 1.91 | -3.15 | -- | -- | 0.114 | 7.22 | 24.2 | 368 | -- | -- |
| 474.81 | 1.01 | 6.36 | -4.42 | -- | -2.34 | -- | 4.38 | 0.0172 | -- | 27.9 | 1393 | -- | -- |
| 447.06 | 0.991 | 6.14 | -2.79 | 1.66 | -- | 0.259 | -- | 0.677 | 7.54 | -- | -- | -- | -- |
| 447.25 | 0.99 | 6.14 | -2.78 | 1.66 | -- | -- | -- | 0.676 | 7.54 | -- | -- | -- | -- |
| 476.35 | 1.02 | 6.28 | -3.36 | -- | -2.71 | -- | -- | 0.263 | -- | 24.17 | 1499 | -- | -- |
| 610.21 | 1.15 | 6.12 | -- | 1.75 | -1.66 | -- | -- | 0.757 | 7.51 | 24.2 | 368 | -- | -- |
| 594.57 | 1.14 | 6.18 | -2.75 | -- | -- | -- | -- | 0.702 | -- | -- | -- | -- | -- |
| 650.78 | 1.19 | 6.07 | -- | 1.64 | -- | -- | -- | 0.986 | 7.66 | -- | -- | -- | -- |
| 749.49 | 1.28 | 6.15 | -- | -- | -1.67 | -- | -- | 0.805 | -- | 23.59 | 10 | -- | -- |
| 794.71 | 1.32 | 6.11 | -- | -- | -- | -- | -- | 1.01 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 303.79 | temperature | 15 | 720 | > th | dose dependent | rect. | 17 | 13 |
| 2 | 303.95 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 15 |
| 6 | 305.60 | temperature | 15 | 720 | > th | dose dependent | rect. | 18 | 11 |
| 8 | 306.54 | temperature | 30 | 720 | < th | dose dependent | sin | 12 | NA |
| 11 | 307.60 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 15 |
| 31 | 310.86 | temperature | 20 | 270 | > th | dose independent | rect. | 24 | 22 |
| 37 | 311.57 | temperature | 15 | 720 | > th | dose dependent | sin | 12 | NA |
| 45 | 312.65 | temperature | 30 | 720 | < th | dose dependent | rect. | 19 | 8 |
| 49 | 312.94 | temperature | 25 | 270 | < th | dose dependent | rect. | 11 | 23 |
| 55 | 313.61 | temperature | 20 | 270 | > th | dose independent | rect. | 10 | 22 |
| 66 | 314.41 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 18 |
| 76 | 315.19 | temperature | 25 | 270 | < th | dose dependent | rect. | 3 | 23 |
| 86 | 315.77 | temperature | 25 | 270 | < th | dose dependent | no | NA | NA |
| 88 | 315.78 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 89 | 315.80 | temperature | 25 | 270 | < th | dose dependent | rect. | 20 | 23 |
| 91 | 315.85 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 6 |
| 111 | 316.61 | temperature | 25 | 270 | < th | dose dependent | rect. | 15 | 23 |
| 116 | 316.72 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 160 | 318.07 | temperature | 25 | 720 | < th | dose dependent | rect. | 9 | 20 |
| 196 | 318.85 | wind | 5 | 43200 | > th | dose independent | rect. | 14 | 2 |
| 198 | 318.88 | wind | 5 | 43200 | < th | dose independent | rect. | 13 | 12 |
| 211 | 319.24 | wind | 5 | 43200 | > th | dose independent | rect. | 14 | 11 |
| 269 | 320.30 | wind | 5 | 43200 | < th | dose independent | rect. | 14 | 2 |
| 275 | 320.48 | wind | 5 | 43200 | > th | dose independent | rect. | 14 | 7 |
| 368 | 322.16 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 377 | 322.37 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 394 | 322.80 | wind | 9 | 43200 | < th | dose dependent | rect. | 13 | 2 |
| 407 | 322.89 | wind | 1 | 43200 | > th | dose dependent | rect. | 13 | 2 |
| 408 | 322.89 | wind | 3 | 43200 | > th | dose dependent | rect. | 13 | 12 |
| 506 | 324.20 | wind | 5 | 43200 | < th | dose independent | sin | 17 | NA |
| 554 | 324.89 | temperature | 20 | 270 | > th | dose independent | rect. | 1 | 16 |
| 568 | 325.06 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 6 |
| 583 | 325.24 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 15 | 1 |
| 592 | 325.37 | wind | 5 | 43200 | > th | dose independent | sin | 17 | NA |
| 660 | 325.93 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 5 |
| 674 | 326.06 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 22 |
| 711 | 326.26 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 7 |
| 718 | 326.31 | temperature | 15 | 1440 | > th | dose dependent | rect. | 11 | 23 |
| 735 | 326.36 | temperature | 15 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 758 | 326.47 | temperature | 15 | 1440 | > th | dose dependent | no | NA | NA |
| 763 | 326.49 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 9 |
| 764 | 326.49 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 18 |
| 784 | 326.54 | wind | 3 | 43200 | > th | dose dependent | sin | 18 | NA |
| 796 | 326.57 | temperature | 15 | 1440 | > th | dose dependent | rect. | 7 | 23 |
| 846 | 326.73 | temperature | 15 | 1440 | > th | dose dependent | rect. | 4 | 23 |
| 906 | 326.88 | temperature | 15 | 1440 | > th | dose dependent | rect. | 2 | 12 |
| 972 | 327.03 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 14 | 2 |
| 981 | 327.06 | temperature | 15 | 1440 | > th | dose dependent | sin | 4 | NA |