Os09g0531900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Glycosyltransferase QUASIMODO1 (EC 2.4.1.-).
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Os09g0531900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Glycosyltransferase QUASIMODO1 (EC 2.4.1.-).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 33.43 | 0.272 | 10.1 | -1.08 | 0.207 | -1.15 | -0.926 | -0.178 | -0.308 | 23.1 | 24.83 | 31 | -- | -- |
| 33.48 | 0.269 | 10.1 | -1.1 | 0.207 | -1.14 | -0.953 | -- | -0.308 | 23 | 24.74 | 31 | -- | -- |
| 34.81 | 0.275 | 10.1 | -1.01 | 0.343 | -1.26 | -- | -0.532 | -0.33 | 1.68 | 27.51 | 50 | -- | -- |
| 35.47 | 0.277 | 10.1 | -1.1 | 0.34 | -1.22 | -- | -- | -0.353 | 1.73 | 27.69 | 60 | -- | -- |
| 39.02 | 0.291 | 10.1 | -0.938 | -- | -1.1 | -- | -0.654 | -0.259 | -- | 24.65 | 70 | -- | -- |
| 53.1 | 0.342 | 10 | -0.842 | 0.0386 | -- | -1.02 | -- | -0.0979 | 22.1 | -- | -- | -- | -- |
| 57.07 | 0.354 | 10 | -0.8 | 0.0736 | -- | -- | -- | -0.0941 | 18.8 | -- | -- | -- | -- |
| 39.16 | 0.291 | 10.1 | -1.07 | -- | -1.06 | -- | -- | -0.319 | -- | 25.66 | 279 | -- | -- |
| 64.27 | 0.375 | 10.1 | -- | 0.202 | -0.774 | -- | -- | -0.154 | 0.452 | 27.14 | 39 | -- | -- |
| 57.35 | 0.354 | 10 | -0.802 | -- | -- | -- | -- | -0.0955 | -- | -- | -- | -- | -- |
| 73.93 | 0.402 | 10 | -- | 0.084 | -- | -- | -- | -0.00502 | 18.2 | -- | -- | -- | -- |
| 65.94 | 0.378 | 10 | -- | -- | -0.66 | -- | -- | -0.128 | -- | 25.79 | 40 | -- | -- |
| 74.3 | 0.402 | 10 | -- | -- | -- | -- | -- | -0.00661 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 31.58 | temperature | 15 | 720 | > th | dose dependent | rect. | 8 | 17 |
| 9 | 31.79 | temperature | 15 | 720 | > th | dose dependent | sin | 19 | NA |
| 58 | 32.39 | temperature | 10 | 10 | > th | dose dependent | sin | 14 | NA |
| 60 | 32.41 | temperature | 30 | 720 | < th | dose dependent | rect. | 7 | 17 |
| 73 | 32.48 | temperature | 30 | 10 | < th | dose dependent | sin | 15 | NA |
| 87 | 32.54 | temperature | 30 | 90 | < th | dose dependent | sin | 16 | NA |
| 89 | 32.56 | temperature | 30 | 720 | < th | dose dependent | sin | 20 | NA |
| 132 | 32.83 | temperature | 25 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 248 | 33.39 | temperature | 25 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 253 | 33.41 | temperature | 25 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 258 | 33.42 | temperature | 25 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 260 | 33.43 | temperature | 25 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 261 | 33.43 | temperature | 25 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 262 | 33.44 | temperature | 25 | 30 | < th | dose dependent | no | NA | NA |
| 263 | 33.44 | temperature | 25 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 267 | 33.46 | temperature | 25 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 269 | 33.47 | temperature | 25 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 277 | 33.49 | temperature | 25 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 279 | 33.49 | temperature | 25 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 287 | 33.51 | temperature | 25 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 352 | 33.70 | temperature | 10 | 720 | > th | dose dependent | no | NA | NA |
| 406 | 33.88 | temperature | 10 | 720 | > th | dose dependent | rect. | 15 | 23 |
| 522 | 34.23 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 6 |
| 544 | 34.29 | temperature | 30 | 720 | < th | dose dependent | rect. | 10 | 23 |
| 549 | 34.31 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 23 |
| 637 | 34.49 | temperature | 15 | 720 | > th | dose dependent | rect. | 21 | 23 |
| 640 | 34.50 | temperature | 30 | 720 | < th | dose dependent | no | NA | NA |
| 646 | 34.51 | temperature | 25 | 90 | < th | dose dependent | rect. | 11 | 16 |
| 772 | 34.66 | temperature | 10 | 1440 | > th | dose dependent | rect. | 22 | 20 |
| 796 | 34.68 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 17 |