Os09g0531800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycosyl transferase, family 8 protein.
FiT-DB / Search/ Help/ Sample detail
|
Os09g0531800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Glycosyl transferase, family 8 protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 108.23 | 0.489 | 6.78 | -1.66 | 0.437 | -2.37 | -0.917 | -1.59 | -0.339 | 17.9 | 31.05 | 27 | -- | -- |
| 110.74 | 0.49 | 6.82 | -1.94 | 0.451 | -2.43 | -0.736 | -- | -0.414 | 18.4 | 31.3 | 18 | -- | -- |
| 109.91 | 0.488 | 6.79 | -1.71 | 0.449 | -2.37 | -- | -1.29 | -0.362 | 18.1 | 31 | 19 | -- | -- |
| 111.92 | 0.493 | 6.82 | -1.91 | 0.456 | -2.38 | -- | -- | -0.408 | 18.1 | 31.2 | 18 | -- | -- |
| 117.67 | 0.505 | 6.79 | -1.79 | -- | -2.62 | -- | -1.35 | -0.417 | -- | 31.09 | 90 | -- | -- |
| 182.29 | 0.633 | 6.72 | -1.37 | 1.1 | -- | 0.207 | -- | 0.0103 | 15.7 | -- | -- | -- | -- |
| 182.42 | 0.632 | 6.72 | -1.37 | 1.1 | -- | -- | -- | 0.0115 | 15.7 | -- | -- | -- | -- |
| 119.33 | 0.509 | 6.81 | -1.99 | -- | -2.76 | -- | -- | -0.455 | -- | 31.8 | 90 | -- | -- |
| 197.9 | 0.659 | 6.74 | -- | 0.691 | -1.55 | -- | -- | -0.068 | 16.8 | 31.2 | 18 | -- | -- |
| 249.72 | 0.738 | 6.72 | -1.41 | -- | -- | -- | -- | -0.0179 | -- | -- | -- | -- | -- |
| 231.56 | 0.712 | 6.68 | -- | 1.13 | -- | -- | -- | 0.164 | 15.7 | -- | -- | -- | -- |
| 217.58 | 0.687 | 6.74 | -- | -- | -2.14 | -- | -- | -0.134 | -- | 32.41 | 54 | -- | -- |
| 302.27 | 0.812 | 6.68 | -- | -- | -- | -- | -- | 0.139 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 106.15 | temperature | 30 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 2 | 106.75 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 4 | 108.04 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 7 | 108.50 | temperature | 30 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 9 | 108.71 | temperature | 30 | 30 | < th | dose dependent | no | NA | NA |
| 10 | 108.82 | temperature | 30 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 12 | 108.83 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 13 | 109.09 | temperature | 30 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 16 | 109.61 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 18 | 109.92 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 19 | 109.99 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 20 | 110.00 | temperature | 15 | 10 | > th | dose dependent | no | NA | NA |
| 32 | 111.40 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 38 | 111.90 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 39 | 111.94 | temperature | 15 | 90 | > th | dose dependent | rect. | 6 | 23 |
| 55 | 113.03 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 60 | 113.67 | temperature | 30 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 62 | 113.79 | temperature | 30 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 71 | 114.29 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 74 | 114.37 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 94 | 115.57 | temperature | 20 | 90 | > th | dose dependent | rect. | 16 | 23 |
| 131 | 117.15 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 150 | 117.77 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 21 |
| 170 | 118.52 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 12 |
| 171 | 118.53 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 14 |
| 198 | 118.97 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 2 |
| 200 | 118.97 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 217 | 119.27 | temperature | 20 | 1440 | > th | dose dependent | sin | 13 | NA |
| 229 | 119.49 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 5 |
| 238 | 119.56 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 5 |
| 243 | 119.62 | temperature | 10 | 4320 | > th | dose dependent | rect. | 23 | 3 |
| 252 | 119.75 | temperature | 30 | 4320 | < th | dose dependent | rect. | 23 | 3 |
| 259 | 119.80 | temperature | 30 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 260 | 119.81 | temperature | 10 | 4320 | > th | dose dependent | rect. | 1 | 1 |
| 263 | 119.81 | temperature | 20 | 90 | > th | dose dependent | rect. | 13 | 23 |
| 311 | 120.05 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 22 |
| 396 | 120.41 | temperature | 20 | 90 | > th | dose dependent | rect. | 7 | 17 |
| 562 | 121.00 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 7 |
| 591 | 121.09 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 626 | 121.24 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 19 |
| 697 | 121.47 | temperature | 25 | 4320 | < th | dose dependent | sin | 13 | NA |
| 723 | 121.52 | temperature | 20 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 771 | 121.63 | temperature | 20 | 1440 | > th | dose dependent | rect. | 3 | 4 |
| 776 | 121.64 | temperature | 10 | 4320 | > th | dose dependent | sin | 12 | NA |
| 786 | 121.66 | temperature | 30 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 801 | 121.70 | temperature | 10 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 902 | 121.90 | temperature | 25 | 1440 | < th | dose independent | rect. | 16 | 6 |