Os09g0530900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Oxydoreductase-like protein.
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Os09g0530900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Oxydoreductase-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26.79 | 0.243 | 10.4 | 0.181 | 1.04 | -0.237 | 0.488 | 2.76 | 0.0894 | 8.2 | 20.37 | 3591 | -- | -- |
| 31.51 | 0.261 | 10.4 | -0.157 | 1.07 | -0.44 | 0.58 | -- | 0.0301 | 7.91 | 13.38 | 24004 | -- | -- |
| 26.98 | 0.242 | 10.4 | 0.21 | 1.04 | -0.218 | -- | 2.67 | 0.0854 | 8.15 | 20.18 | 3019 | -- | -- |
| 30.97 | 0.259 | 10.4 | -0.252 | 1.05 | -0.448 | -- | -- | 0.00844 | 8.15 | 12.23 | 22495 | -- | -- |
| 77.6 | 0.41 | 10.3 | 1.19 | -- | -1.12 | -- | 7.98 | 0.254 | -- | 26.2 | 2140 | -- | -- |
| 33.06 | 0.27 | 10.5 | -0.646 | 1.05 | -- | 0.364 | -- | -0.153 | 8.22 | -- | -- | -- | -- |
| 33.47 | 0.271 | 10.5 | -0.635 | 1.05 | -- | -- | -- | -0.153 | 8.21 | -- | -- | -- | -- |
| 90.76 | 0.444 | 10.4 | -0.189 | -- | -0.511 | -- | -- | 0.0674 | -- | 10.82 | 22340 | -- | -- |
| 31.87 | 0.263 | 10.4 | -- | 1.04 | -0.599 | -- | -- | 0.0871 | 8.14 | 9.864 | 22889 | -- | -- |
| 94.4 | 0.454 | 10.5 | -0.627 | -- | -- | -- | -- | -0.141 | -- | -- | -- | -- | -- |
| 44.11 | 0.311 | 10.5 | -- | 1.05 | -- | -- | -- | -0.0823 | 8.25 | -- | -- | -- | -- |
| 91.22 | 0.445 | 10.4 | -- | -- | -0.64 | -- | -- | 0.107 | -- | 9.537 | 22343 | -- | -- |
| 104.78 | 0.478 | 10.5 | -- | -- | -- | -- | -- | -0.0714 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 25.85 | temperature | 20 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 6 | 25.92 | wind | 1 | 43200 | < th | dose independent | rect. | 21 | 5 |
| 7 | 25.94 | wind | 1 | 43200 | < th | dose independent | rect. | 23 | 3 |
| 35 | 26.02 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 36 | 26.03 | wind | 1 | 43200 | > th | dose independent | rect. | 22 | 4 |
| 86 | 26.18 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 2 |
| 99 | 26.22 | humidity | 90 | 14400 | > th | dose dependent | rect. | 2 | 8 |
| 109 | 26.24 | wind | 1 | 43200 | < th | dose dependent | rect. | 21 | 5 |
| 110 | 26.24 | wind | 1 | 43200 | < th | dose dependent | rect. | 19 | 7 |
| 114 | 26.26 | temperature | 20 | 1440 | > th | dose dependent | sin | 11 | NA |
| 136 | 26.30 | humidity | 90 | 14400 | > th | dose dependent | rect. | 2 | 12 |
| 145 | 26.33 | humidity | 90 | 14400 | > th | dose dependent | rect. | 2 | 15 |
| 157 | 26.36 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 10 | 2 |
| 180 | 26.41 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 3 |
| 183 | 26.41 | wind | 1 | 43200 | < th | dose dependent | rect. | 23 | 3 |
| 197 | 26.45 | wind | 3 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 216 | 26.48 | wind | 1 | 43200 | < th | dose dependent | rect. | 24 | 1 |
| 245 | 26.53 | temperature | 20 | 1440 | < th | dose independent | rect. | 4 | 2 |
| 253 | 26.54 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 10 | 2 |
| 316 | 26.63 | temperature | 25 | 4320 | < th | dose independent | rect. | 16 | 16 |
| 320 | 26.63 | wind | 1 | 43200 | < th | dose dependent | rect. | 13 | 13 |
| 326 | 26.64 | humidity | 90 | 14400 | > th | dose dependent | sin | 5 | NA |
| 350 | 26.67 | temperature | 25 | 4320 | < th | dose independent | sin | 9 | NA |
| 351 | 26.67 | temperature | 25 | 4320 | < th | dose independent | sin | 12 | NA |
| 377 | 26.69 | wind | 1 | 43200 | < th | dose dependent | rect. | 16 | 10 |
| 391 | 26.71 | wind | 7 | 14400 | > th | dose independent | rect. | 10 | 2 |
| 402 | 26.72 | temperature | 20 | 1440 | > th | dose independent | rect. | 4 | 2 |
| 408 | 26.72 | temperature | 25 | 4320 | < th | dose independent | rect. | 19 | 18 |
| 423 | 26.74 | temperature | 25 | 4320 | > th | dose independent | rect. | 16 | 16 |
| 452 | 26.77 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 453 | 26.77 | temperature | 25 | 4320 | < th | dose independent | rect. | 16 | 12 |
| 455 | 26.77 | wind | 7 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 478 | 26.79 | wind | 7 | 14400 | < th | dose independent | rect. | 10 | 2 |
| 483 | 26.79 | temperature | 25 | 4320 | > th | dose independent | rect. | 19 | 18 |
| 489 | 26.80 | temperature | 25 | 4320 | > th | dose independent | sin | 9 | NA |
| 490 | 26.80 | temperature | 25 | 4320 | > th | dose independent | sin | 12 | NA |
| 491 | 26.80 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 518 | 26.82 | humidity | 90 | 14400 | > th | dose dependent | rect. | 3 | 1 |
| 541 | 26.84 | wind | 1 | 43200 | < th | dose independent | rect. | 24 | 1 |
| 543 | 26.84 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 11 | 6 |
| 546 | 26.84 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 11 | 8 |
| 554 | 26.84 | temperature | 25 | 4320 | < th | dose independent | rect. | 19 | 14 |
| 562 | 26.85 | temperature | 25 | 1440 | < th | dose independent | rect. | 17 | 8 |
| 577 | 26.86 | wind | 1 | 43200 | > th | dose independent | rect. | 24 | 1 |
| 579 | 26.86 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 11 | 8 |
| 587 | 26.86 | wind | 7 | 14400 | > th | dose dependent | rect. | 22 | 16 |
| 610 | 26.87 | humidity | 90 | 14400 | > th | dose dependent | rect. | 13 | 17 |
| 632 | 26.89 | humidity | 90 | 14400 | > th | dose independent | rect. | 2 | 7 |
| 646 | 26.90 | temperature | 25 | 4320 | > th | dose independent | rect. | 16 | 11 |
| 650 | 26.90 | wind | 9 | 14400 | < th | dose independent | rect. | 22 | 16 |
| 664 | 26.91 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 20 | 16 |
| 689 | 26.93 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 690 | 26.93 | wind | 3 | 43200 | < th | dose independent | rect. | 11 | 2 |
| 701 | 26.93 | wind | 7 | 14400 | > th | dose dependent | rect. | 5 | 8 |
| 783 | 26.96 | wind | 7 | 14400 | > th | dose dependent | rect. | 3 | 11 |
| 796 | 26.97 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 811 | 26.97 | wind | 7 | 14400 | > th | dose dependent | rect. | 9 | 3 |
| 837 | 26.98 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 21 | 8 |
| 840 | 26.98 | humidity | 90 | 14400 | > th | dose independent | rect. | 23 | 11 |
| 889 | 26.99 | humidity | 90 | 14400 | > th | dose dependent | rect. | 7 | 23 |
| 940 | 27.01 | wind | 1 | 43200 | < th | dose dependent | rect. | 10 | 18 |
| 973 | 27.03 | humidity | 90 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 991 | 27.03 | wind | 1 | 43200 | < th | dose dependent | sin | 16 | NA |