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Os09g0530300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Cytochrome P450 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.2 (0.0354) R2 : 0.672
β1 : 1.79 (0.132) R2dD : 0.142 R2D : 0.0854
β2 : 2.2 (0.0857) R2dC : 0.476 R2C : 0.505
β3 : 1.6 (0.174) R2dE : 0.0724 R2E : 0.0699
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.149 (0.0795) R2dN8 : 0.0057 R2N8 : -0.0132
σ : 0.653
deviance : 196.42
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C
peak time of C : 14.3
E
wheather : radiation
threshold : 3.139
memory length : 1421
response mode : < th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
196.29 0.658 10.2 1.64 2.27 2.11 -0.649 2.22 0.145 14.2 1.434 1442 -- --
195.01 0.65 10.2 1.77 2.25 1.59 -0.752 -- 0.139 14.3 3.202 1431 -- --
196.6 0.653 10.2 1.67 2.26 1.71 -- 0.958 0.135 14.2 2.896 1443 -- --
196.42 0.653 10.2 1.79 2.2 1.6 -- -- 0.149 14.3 3.139 1421 -- --
385.42 0.919 10.2 1.37 -- -1.2 -- 0.747 -0.139 -- 2.896 1443 -- --
234.04 0.717 10.2 1.5 2.28 -- -0.458 -- -0.041 14.2 -- -- -- --
234.82 0.718 10.2 1.48 2.28 -- -- -- -0.0436 14.3 -- -- -- --
282.5 0.783 10.2 1.36 -- -1.62 -- -- -0.0899 -- 2.857 267 -- --
268.63 0.763 10.1 -- 2.66 1.41 -- -- 0.0344 14 10 1605 -- --
543.69 1.09 10.2 1.39 -- -- -- -- -0.0988 -- -- -- -- --
292.87 0.801 10.2 -- 2.25 -- -- -- -0.209 14.2 -- -- -- --
326.82 0.842 10.3 -- -- -1.77 -- -- -0.311 -- 1.83 316 -- --
594.53 1.14 10.3 -- -- -- -- -- -0.253 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 190.06 humidity 70.0 14400 < th dose independent rect. 19 12
2 190.39 humidity 70.0 14400 < th dose independent rect. 19 3
13 191.32 humidity 70.0 14400 > th dose independent rect. 19 4
15 191.32 humidity 70.0 14400 > th dose independent rect. 19 9
16 191.33 radiation 1.0 1440 < th dose independent rect. 9 21
21 191.36 humidity 70.0 14400 > th dose independent rect. 19 12
30 192.04 radiation 1.0 1440 > th dose independent rect. 9 21
33 192.24 wind 9.0 14400 > th dose independent rect. 16 1
38 192.50 radiation 20.0 1440 < th dose dependent rect. 18 1
47 192.93 radiation 1.0 1440 < th dose dependent rect. 8 22
49 192.98 temperature 25.0 14400 > th dose dependent rect. 23 1
53 193.20 humidity 80.0 720 > th dose independent rect. 19 3
54 193.25 radiation 1.0 1440 < th dose independent sin 14 NA
62 193.39 wind 5.0 43200 < th dose independent rect. 11 1
66 193.62 wind 5.0 43200 > th dose independent rect. 11 1
68 193.68 wind 5.0 43200 < th dose independent rect. 20 1
70 193.72 humidity 70.0 1440 > th dose independent rect. 19 12
74 193.77 wind 5.0 43200 > th dose independent rect. 20 1
76 193.87 humidity 90.0 43200 > th dose dependent rect. 22 1
78 193.91 humidity 90.0 43200 > th dose dependent rect. 21 3
80 193.96 humidity 70.0 1440 < th dose independent rect. 18 13
83 194.00 radiation 1.0 1440 > th dose independent sin 15 NA
84 194.00 temperature 25.0 14400 > th dose independent rect. 23 1
94 194.15 humidity 70.0 1440 < th dose independent rect. 18 2
107 194.17 wind 5.0 43200 > th dose independent rect. 10 3
111 194.19 wind 5.0 43200 > th dose dependent rect. 12 1
113 194.22 radiation 1.0 1440 < th dose independent rect. 8 11
116 194.24 wind 5.0 43200 < th dose independent rect. 10 3
153 194.48 wind 7.0 43200 > th dose dependent rect. 11 12
158 194.52 radiation 1.0 1440 < th dose dependent rect. 8 11
165 194.55 radiation 40.0 14400 < th dose dependent rect. 18 3
169 194.57 radiation 1.0 1440 < th dose dependent sin 15 NA
177 194.60 radiation 40.0 14400 < th dose dependent rect. 18 6
205 194.71 radiation 40.0 14400 < th dose dependent rect. 18 1
212 194.72 radiation 40.0 14400 < th dose dependent rect. 18 10
214 194.73 humidity 80.0 720 < th dose dependent rect. 18 4
217 194.74 wind 9.0 43200 < th dose independent rect. 11 18
229 194.78 temperature 25.0 14400 > th dose dependent rect. 19 5
232 194.79 radiation 1.0 1440 > th dose independent rect. 8 11
251 194.81 radiation 40.0 1440 < th dose dependent rect. 16 3
261 194.82 wind 9.0 43200 > th dose independent rect. 11 18
284 194.90 wind 9.0 43200 > th dose independent rect. 14 9
290 194.92 humidity 90.0 43200 > th dose dependent rect. 10 1
301 194.96 wind 9.0 43200 < th dose independent rect. 14 9
319 194.99 wind 7.0 43200 > th dose dependent rect. 11 15
353 195.11 wind 7.0 43200 > th dose dependent rect. 11 18
377 195.18 temperature 25.0 14400 > th dose dependent rect. 19 1
381 195.19 radiation 40.0 14400 < th dose dependent rect. 17 12
386 195.21 temperature 30.0 14400 < th dose independent rect. 18 1
419 195.27 radiation 40.0 1440 < th dose dependent rect. 16 12
420 195.27 radiation 40.0 14400 > th dose dependent rect. 15 18
427 195.30 precipitation 0.1 43200 < th dose independent rect. 9 1
428 195.30 precipitation 0.1 43200 < th dose dependent rect. 9 1
456 195.36 temperature 25.0 14400 > th dose dependent rect. 18 12
462 195.38 temperature 25.0 14400 < th dose independent rect. 23 1
463 195.38 temperature 30.0 14400 < th dose independent rect. 18 14
524 195.46 humidity 90.0 43200 > th dose independent rect. 10 1
526 195.46 wind 7.0 43200 > th dose dependent rect. 15 1
548 195.51 precipitation 0.1 43200 > th dose independent rect. 9 1
552 195.51 precipitation 0.1 43200 > th dose dependent rect. 9 1
556 195.52 wind 7.0 43200 > th dose independent rect. 11 11
557 195.52 radiation 20.0 14400 > th dose dependent rect. 16 15
579 195.59 wind 7.0 43200 > th dose dependent rect. 14 8
588 195.61 radiation 1.0 14400 > th dose dependent rect. 17 12
589 195.61 radiation 1.0 43200 < th dose dependent rect. 6 13
612 195.68 radiation 1.0 14400 > th dose dependent rect. 17 2
613 195.68 humidity 70.0 720 > th dose dependent rect. 19 3
628 195.69 temperature 25.0 43200 > th dose independent rect. 17 2
631 195.69 wind 9.0 43200 < th dose independent rect. 14 12
633 195.69 radiation 1.0 43200 < th dose dependent rect. 6 1
637 195.70 wind 9.0 43200 > th dose independent rect. 14 15
645 195.72 temperature 30.0 14400 < th dose independent rect. 18 10
655 195.74 temperature 25.0 43200 > th dose independent rect. 8 1
656 195.74 radiation 1.0 43200 < th dose independent rect. 6 1
664 195.77 temperature 20.0 43200 < th dose independent rect. 4 1
667 195.78 temperature 20.0 43200 > th dose independent rect. 4 1
669 195.78 radiation 1.0 43200 > th dose independent rect. 6 1
670 195.78 temperature 25.0 43200 < th dose independent rect. 7 2
697 195.84 temperature 25.0 14400 < th dose independent rect. 22 5
707 195.85 radiation 1.0 43200 < th dose dependent rect. 8 11
733 195.90 radiation 1.0 43200 < th dose dependent rect. 12 7
765 195.93 radiation 1.0 43200 < th dose dependent sin 20 NA
781 195.94 radiation 1.0 43200 < th dose independent rect. 6 13
793 195.95 radiation 1.0 43200 < th dose independent rect. 6 21
811 195.97 radiation 1.0 43200 < th dose dependent rect. 12 16
829 195.99 radiation 1.0 43200 > th dose independent rect. 6 11
834 196.00 radiation 1.0 43200 < th dose independent rect. 6 11
836 196.00 radiation 1.0 43200 > th dose independent rect. 6 13
863 196.03 radiation 20.0 14400 > th dose dependent rect. 16 1
895 196.05 wind 7.0 43200 > th dose dependent rect. 14 4
913 196.08 radiation 30.0 14400 < th dose independent rect. 15 6
914 196.08 radiation 30.0 14400 < th dose independent rect. 15 8
927 196.09 radiation 30.0 14400 < th dose independent rect. 15 12
933 196.10 radiation 30.0 14400 < th dose independent rect. 15 4
935 196.10 wind 9.0 43200 < th dose independent rect. 14 6
979 196.15 temperature 30.0 1440 > th dose dependent rect. 18 15
981 196.16 wind 9.0 43200 < th dose independent rect. 14 15
985 196.16 radiation 1.0 1440 < th dose dependent rect. 5 14
988 196.17 radiation 1.0 43200 < th dose independent rect. 8 11