Os09g0522800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1618 domain containing protein.
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Os09g0522800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF1618 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 106.16 | 0.484 | 8.84 | 0.969 | 0.185 | -0.225 | -0.0288 | 5.91 | 0.744 | 9.37 | 39.99 | 5640 | -- | -- |
| 101.05 | 0.468 | 8.8 | 2.32 | 0.239 | -1.61 | -0.415 | -- | 1.14 | 8.74 | 70 | 11492 | -- | -- |
| 106.16 | 0.48 | 8.84 | 0.969 | 0.185 | -0.223 | -- | 5.92 | 0.744 | 9.33 | 40 | 5638 | -- | -- |
| 99.21 | 0.464 | 8.83 | 2.34 | 0.229 | -1.74 | -- | -- | 1.15 | 8.55 | 69.8 | 11473 | -- | -- |
| 108.16 | 0.484 | 8.84 | 0.963 | -- | -0.201 | -- | 5.94 | 0.751 | -- | 39.99 | 5638 | -- | -- |
| 160.94 | 0.595 | 8.92 | 1.26 | 0.181 | -- | 0.108 | -- | 0.79 | 9.64 | -- | -- | -- | -- |
| 160.98 | 0.594 | 8.92 | 1.27 | 0.18 | -- | -- | -- | 0.79 | 9.68 | -- | -- | -- | -- |
| 87.28 | 0.435 | 8.8 | 3 | -- | -2.32 | -- | -- | 1.33 | -- | 71.41 | 21586 | -- | -- |
| 181.03 | 0.627 | 8.88 | -- | 0.235 | -0.82 | -- | -- | 0.898 | 8.81 | 61.07 | 11063 | -- | -- |
| 162.9 | 0.596 | 8.92 | 1.27 | -- | -- | -- | -- | 0.79 | -- | -- | -- | -- | -- |
| 203.43 | 0.667 | 8.95 | -- | 0.179 | -- | -- | -- | 0.649 | 9.15 | -- | -- | -- | -- |
| 175.64 | 0.617 | 8.87 | -- | -- | -1.3 | -- | -- | 0.948 | -- | 61 | 5917 | -- | -- |
| 205.28 | 0.669 | 8.95 | -- | -- | -- | -- | -- | 0.65 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 80.51 | temperature | 15 | 43200 | < th | dose dependent | rect. | 2 | 8 |
| 2 | 80.52 | temperature | 15 | 43200 | < th | dose dependent | rect. | 3 | 6 |
| 14 | 80.82 | temperature | 15 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 39 | 81.33 | temperature | 15 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 42 | 81.43 | temperature | 15 | 43200 | < th | dose dependent | sin | 4 | NA |
| 56 | 81.57 | temperature | 15 | 43200 | < th | dose independent | rect. | 4 | 5 |
| 91 | 82.13 | temperature | 15 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 102 | 82.24 | temperature | 15 | 43200 | < th | dose independent | rect. | 3 | 13 |
| 119 | 82.43 | temperature | 15 | 43200 | < th | dose dependent | rect. | 16 | 18 |
| 168 | 82.51 | temperature | 15 | 43200 | < th | dose independent | sin | 3 | NA |
| 169 | 82.51 | temperature | 15 | 43200 | < th | dose dependent | no | NA | NA |
| 190 | 82.54 | temperature | 15 | 43200 | < th | dose dependent | rect. | 8 | 23 |
| 311 | 82.99 | temperature | 15 | 43200 | < th | dose independent | rect. | 12 | 21 |
| 323 | 83.03 | temperature | 15 | 43200 | < th | dose independent | rect. | 14 | 19 |
| 372 | 83.20 | temperature | 15 | 43200 | > th | dose independent | rect. | 3 | 14 |
| 416 | 83.34 | temperature | 15 | 43200 | < th | dose independent | no | NA | NA |
| 419 | 83.35 | temperature | 15 | 43200 | < th | dose independent | rect. | 19 | 14 |
| 450 | 83.41 | temperature | 15 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 461 | 83.44 | temperature | 15 | 43200 | > th | dose independent | sin | 2 | NA |
| 464 | 83.45 | temperature | 15 | 43200 | > th | dose independent | rect. | 5 | 11 |
| 484 | 83.51 | temperature | 15 | 43200 | < th | dose independent | rect. | 5 | 23 |
| 519 | 83.60 | temperature | 15 | 43200 | > th | dose independent | rect. | 5 | 4 |
| 559 | 83.71 | temperature | 15 | 43200 | > th | dose independent | rect. | 12 | 21 |
| 678 | 84.07 | temperature | 15 | 43200 | > th | dose independent | no | NA | NA |
| 684 | 84.08 | temperature | 15 | 43200 | > th | dose independent | rect. | 18 | 23 |
| 768 | 84.34 | humidity | 80 | 43200 | > th | dose dependent | rect. | 22 | 15 |
| 853 | 84.69 | temperature | 15 | 43200 | > th | dose independent | rect. | 3 | 6 |
| 862 | 84.71 | temperature | 15 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 901 | 84.83 | temperature | 15 | 43200 | > th | dose independent | sin | 15 | NA |
| 935 | 84.97 | temperature | 15 | 43200 | > th | dose independent | rect. | 22 | 11 |