Os09g0521000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : FAE1/Type III polyketide synthase-like protein domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os09g0521000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : FAE1/Type III polyketide synthase-like protein domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 87.2 | 0.439 | 10.9 | 1.35 | 0.817 | -1.81 | 0.162 | -0.336 | 0.00628 | 9.41 | 21.42 | 3162 | -- | -- |
| 82.4 | 0.423 | 10.9 | 1.1 | 0.765 | -1.6 | 0.0984 | -- | 0.0143 | 9.61 | 22.18 | 1931 | -- | -- |
| 82.49 | 0.423 | 10.9 | 1.16 | 0.789 | -1.58 | -- | 0.193 | 0.0188 | 9.49 | 22.1 | 1931 | -- | -- |
| 82.32 | 0.423 | 10.9 | 1.09 | 0.791 | -1.56 | -- | -- | -0.0178 | 9.63 | 22.17 | 1857 | -- | -- |
| 107.27 | 0.482 | 10.9 | 0.978 | -- | -1.48 | -- | 0.139 | -0.033 | -- | 22.2 | 831 | -- | -- |
| 169.3 | 0.61 | 11 | 0.454 | 0.843 | -- | 0.0998 | -- | -0.547 | 9.58 | -- | -- | -- | -- |
| 169.34 | 0.609 | 11 | 0.458 | 0.842 | -- | -- | -- | -0.547 | 9.6 | -- | -- | -- | -- |
| 107.28 | 0.482 | 10.9 | 0.954 | -- | -1.5 | -- | -- | -0.0365 | -- | 22.2 | 837 | -- | -- |
| 106.17 | 0.48 | 10.9 | -- | 0.83 | -1.28 | -- | -- | -0.208 | 9.2 | 22.39 | 1404 | -- | -- |
| 211.23 | 0.679 | 11 | 0.451 | -- | -- | -- | -- | -0.545 | -- | -- | -- | -- | -- |
| 174.86 | 0.619 | 11 | -- | 0.841 | -- | -- | -- | -0.598 | 9.56 | -- | -- | -- | -- |
| 128.88 | 0.529 | 11 | -- | -- | -1.31 | -- | -- | -0.191 | -- | 22.4 | 802 | -- | -- |
| 216.6 | 0.687 | 11 | -- | -- | -- | -- | -- | -0.595 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 84.49 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 6 |
| 2 | 84.50 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 4 |
| 15 | 85.10 | temperature | 25 | 1440 | < th | dose dependent | rect. | 19 | 10 |
| 35 | 85.53 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 146 | 86.53 | temperature | 25 | 1440 | < th | dose dependent | sin | 12 | NA |
| 316 | 87.87 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 421 | 88.82 | temperature | 20 | 1440 | > th | dose dependent | sin | 11 | NA |
| 434 | 88.90 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 658 | 90.80 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 2 |
| 834 | 91.55 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 860 | 91.71 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 4 |
| 966 | 92.07 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |