Os09g0520500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os09g0520500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 126.61 | 0.529 | 12.1 | -0.808 | 1.95 | -1.54 | 1.48 | 2.79 | -0.255 | 8.85 | 24.6 | 1617 | -- | -- |
| 132.21 | 0.536 | 12 | 0.0769 | 1.92 | -1.21 | 1.47 | -- | 0.0189 | 8.9 | 23 | 1695 | -- | -- |
| 133.58 | 0.538 | 12.1 | -0.792 | 1.94 | -1.53 | -- | 2.79 | -0.284 | 8.92 | 24.47 | 1615 | -- | -- |
| 139.3 | 0.55 | 12 | 0.127 | 1.91 | -1.22 | -- | -- | 0.0162 | 8.98 | 23.05 | 1689 | -- | -- |
| 339.27 | 0.858 | 12.2 | -0.759 | -- | -1.46 | -- | 2.59 | -0.278 | -- | 24.4 | 1461 | -- | -- |
| 194.6 | 0.654 | 11.9 | 0.554 | 1.91 | -- | 1.54 | -- | 0.508 | 8.87 | -- | -- | -- | -- |
| 202.51 | 0.666 | 11.9 | 0.607 | 1.9 | -- | -- | -- | 0.51 | 8.95 | -- | -- | -- | -- |
| 326.53 | 0.845 | 12.1 | 0.176 | -- | -1.07 | -- | -- | 0.131 | -- | 23.1 | 1574 | -- | -- |
| 139.69 | 0.55 | 12 | -- | 1.9 | -1.24 | -- | -- | -0.00808 | 8.98 | 23.01 | 1689 | -- | -- |
| 409.37 | 0.945 | 12 | 0.606 | -- | -- | -- | -- | 0.523 | -- | -- | -- | -- | -- |
| 212.24 | 0.681 | 11.9 | -- | 1.9 | -- | -- | -- | 0.442 | 8.92 | -- | -- | -- | -- |
| 327.3 | 0.845 | 12.1 | -- | -- | -1.09 | -- | -- | 0.104 | -- | 23.1 | 1574 | -- | -- |
| 419.07 | 0.956 | 12 | -- | -- | -- | -- | -- | 0.455 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 123.94 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 10 | 13 |
| 4 | 124.59 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 10 | 13 |
| 7 | 124.65 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 18 | 14 |
| 8 | 124.73 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 4 | 4 |
| 26 | 125.16 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 15 | 7 |
| 43 | 125.33 | radiation | 10.0 | 43200 | < th | dose independent | sin | 11 | NA |
| 69 | 125.70 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 8 | 2 |
| 70 | 125.77 | radiation | 1.0 | 43200 | > th | dose dependent | rect. | 4 | 3 |
| 83 | 125.82 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 125 | 126.12 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 126 | 126.14 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 13 | 19 |
| 127 | 126.15 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 10 | 2 |
| 139 | 126.23 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 144 | 126.29 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 15 | 7 |
| 146 | 126.30 | radiation | 40.0 | 43200 | < th | dose independent | sin | 15 | NA |
| 147 | 126.31 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 13 | 4 |
| 148 | 126.31 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 13 | 9 |
| 155 | 126.32 | temperature | 25.0 | 1440 | > th | dose independent | sin | 19 | NA |
| 192 | 126.45 | radiation | 20.0 | 43200 | < th | dose dependent | rect. | 4 | 3 |
| 193 | 126.45 | radiation | 20.0 | 43200 | < th | dose dependent | rect. | 22 | 9 |
| 201 | 126.48 | temperature | 25.0 | 1440 | < th | dose independent | sin | 19 | NA |
| 214 | 126.54 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 8 | 4 |
| 252 | 126.63 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 14 | 1 |
| 318 | 126.80 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 18 | 14 |
| 327 | 126.84 | radiation | 20.0 | 43200 | < th | dose dependent | rect. | 18 | 14 |
| 329 | 126.85 | radiation | 30.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 332 | 126.85 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 5 | 18 |
| 347 | 126.92 | wind | 7.0 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 367 | 126.95 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 5 | 18 |
| 420 | 127.10 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 7 | 10 |
| 462 | 127.11 | radiation | 40.0 | 43200 | < th | dose independent | no | NA | NA |
| 542 | 127.14 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 548 | 127.14 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 550 | 127.15 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 16 | 2 |
| 566 | 127.16 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 569 | 127.16 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 651 | 127.37 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 8 | 3 |
| 674 | 127.39 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 16 | 6 |
| 725 | 127.47 | wind | 7.0 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 838 | 127.69 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 8 | 2 |