Os09g0520400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os09g0520400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 283.1 | 0.791 | 2.76 | -0.145 | 0.174 | -1.32 | -0.798 | 5.52 | -0.103 | 0.385 | 50 | 4376 | -- | -- |
| 287.54 | 0.79 | 2.87 | 0.0828 | 0.109 | 0.63 | -0.449 | -- | -0.0475 | 0.319 | 48.82 | 15437 | -- | -- |
| 285.44 | 0.787 | 2.76 | -0.107 | 0.196 | -1.35 | -- | 5.54 | -0.103 | 2.14 | 50 | 4376 | -- | -- |
| 288.38 | 0.791 | 2.84 | 0.111 | 0.151 | 0.761 | -- | -- | 0.0298 | 0.987 | 49.91 | 15457 | -- | -- |
| 287.72 | 0.79 | 2.77 | -0.159 | -- | -1.01 | -- | 4.77 | -0.0839 | -- | 49.8 | 4376 | -- | -- |
| 297.36 | 0.808 | 2.88 | -0.169 | 0.158 | -- | -0.689 | -- | -0.107 | 0.358 | -- | -- | -- | -- |
| 299.05 | 0.81 | 2.87 | -0.144 | 0.181 | -- | -- | -- | -0.106 | 2.16 | -- | -- | -- | -- |
| 290.01 | 0.793 | 2.84 | 0.109 | -- | 0.736 | -- | -- | 0.0299 | -- | 49.79 | 15456 | -- | -- |
| 288.38 | 0.791 | 2.84 | -- | 0.178 | 0.701 | -- | -- | 0.0279 | 2.46 | 49.97 | 15456 | -- | -- |
| 301.01 | 0.811 | 2.87 | -0.137 | -- | -- | -- | -- | -0.101 | -- | -- | -- | -- | -- |
| 299.6 | 0.81 | 2.87 | -- | 0.179 | -- | -- | -- | -0.0897 | 2.14 | -- | -- | -- | -- |
| 290.24 | 0.793 | 2.85 | -- | -- | 0.679 | -- | -- | -0.00177 | -- | 50.37 | 15456 | -- | -- |
| 301.51 | 0.81 | 2.87 | -- | -- | -- | -- | -- | -0.0863 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 270.14 | humidity | 80 | 90 | < th | dose independent | rect. | 2 | 1 |
| 3 | 270.14 | humidity | 80 | 90 | < th | dose dependent | rect. | 2 | 1 |
| 5 | 270.16 | humidity | 90 | 10 | < th | dose dependent | rect. | 3 | 1 |
| 9 | 270.31 | humidity | 90 | 10 | < th | dose independent | rect. | 3 | 1 |
| 12 | 270.58 | wind | 1 | 90 | < th | dose dependent | rect. | 24 | 1 |
| 27 | 273.24 | radiation | 30 | 90 | > th | dose dependent | rect. | 15 | 1 |
| 59 | 273.31 | radiation | 40 | 90 | > th | dose independent | rect. | 15 | 1 |
| 139 | 273.53 | radiation | 20 | 10 | > th | dose independent | rect. | 16 | 1 |
| 200 | 273.69 | wind | 3 | 30 | < th | dose independent | rect. | 15 | 5 |
| 238 | 273.98 | wind | 1 | 10 | < th | dose independent | rect. | 8 | 1 |
| 240 | 273.98 | wind | 1 | 10 | < th | dose dependent | rect. | 8 | 1 |
| 311 | 274.84 | wind | 1 | 90 | < th | dose dependent | rect. | 15 | 1 |
| 315 | 275.37 | humidity | 60 | 10 | < th | dose independent | rect. | 15 | 1 |
| 344 | 275.53 | wind | 3 | 30 | < th | dose independent | rect. | 15 | 13 |
| 354 | 276.16 | humidity | 60 | 10 | < th | dose dependent | rect. | 15 | 1 |
| 355 | 276.16 | atmosphere | 1005 | 10 | < th | dose dependent | rect. | 15 | 12 |
| 375 | 276.45 | wind | 1 | 90 | < th | dose independent | rect. | 24 | 1 |
| 397 | 276.69 | atmosphere | 1005 | 10 | > th | dose dependent | rect. | 3 | 1 |
| 401 | 276.88 | humidity | 60 | 10 | < th | dose dependent | rect. | 15 | 4 |
| 422 | 277.00 | wind | 7 | 30 | < th | dose dependent | rect. | 15 | 13 |
| 423 | 277.03 | wind | 1 | 90 | < th | dose independent | rect. | 15 | 1 |
| 503 | 277.79 | wind | 3 | 10 | < th | dose dependent | rect. | 16 | 1 |
| 602 | 278.73 | wind | 3 | 10 | < th | dose independent | rect. | 16 | 1 |
| 627 | 279.19 | humidity | 60 | 90 | > th | dose independent | rect. | 13 | 12 |
| 652 | 279.55 | wind | 1 | 90 | < th | dose independent | rect. | 6 | 1 |
| 654 | 279.58 | humidity | 90 | 90 | > th | dose independent | rect. | 18 | 2 |
| 661 | 279.81 | humidity | 60 | 90 | < th | dose independent | sin | 14 | NA |
| 668 | 279.93 | humidity | 60 | 10 | < th | dose independent | sin | 13 | NA |
| 669 | 279.94 | humidity | 60 | 90 | > th | dose independent | sin | 14 | NA |
| 690 | 280.15 | temperature | 20 | 10 | < th | dose independent | rect. | 19 | 1 |
| 694 | 280.15 | wind | 1 | 90 | < th | dose independent | rect. | 6 | 3 |
| 696 | 280.17 | temperature | 20 | 10 | < th | dose dependent | rect. | 20 | 1 |
| 757 | 280.49 | humidity | 60 | 90 | < th | dose independent | rect. | 9 | 1 |
| 776 | 280.58 | wind | 1 | 270 | < th | dose dependent | rect. | 4 | 4 |
| 778 | 280.61 | humidity | 60 | 10 | > th | dose independent | sin | 13 | NA |
| 780 | 280.63 | humidity | 60 | 10 | < th | dose independent | rect. | 9 | 1 |
| 811 | 280.67 | humidity | 60 | 10 | < th | dose dependent | rect. | 9 | 1 |
| 886 | 281.04 | radiation | 30 | 10 | < th | dose dependent | rect. | 13 | 11 |
| 888 | 281.06 | wind | 3 | 30 | < th | dose independent | rect. | 12 | 16 |
| 930 | 281.58 | atmosphere | 1005 | 10 | < th | dose dependent | rect. | 12 | 15 |
| 931 | 281.61 | atmosphere | 1005 | 270 | < th | dose independent | rect. | 22 | 1 |
| 968 | 281.67 | atmosphere | 1005 | 10 | < th | dose dependent | rect. | 24 | 2 |