Os09g0519200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os09g0519200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 44.23 | 0.312 | 13.2 | -0.411 | 0.507 | 0.455 | -0.559 | 0.118 | -0.261 | 21.5 | 0.9571 | 34 | -- | -- |
| 44.23 | 0.31 | 13.2 | -0.405 | 0.485 | 0.478 | -0.44 | -- | -0.257 | 21.3 | 1.17 | 39 | -- | -- |
| 44.64 | 0.311 | 13.2 | -0.421 | 0.478 | 0.503 | -- | -0.177 | -0.271 | 21.1 | 1.292 | 39 | -- | -- |
| 44.87 | 0.312 | 13.2 | -0.389 | 0.507 | 0.46 | -- | -- | -0.259 | 21.4 | 0.9516 | 39 | -- | -- |
| 49.76 | 0.33 | 13.1 | -0.375 | -- | 0.74 | -- | -0.356 | -0.251 | -- | 1.292 | 39 | -- | -- |
| 48.6 | 0.327 | 13.2 | -0.439 | 0.991 | -- | -0.351 | -- | -0.271 | 22.7 | -- | -- | -- | -- |
| 49.11 | 0.328 | 13.2 | -0.425 | 0.992 | -- | -- | -- | -0.27 | 22.7 | -- | -- | -- | -- |
| 50.57 | 0.333 | 13.1 | -0.38 | -- | 0.738 | -- | -- | -0.253 | -- | 1.292 | 39 | -- | -- |
| 48.28 | 0.324 | 13.1 | -- | 0.469 | 0.493 | -- | -- | -0.219 | 21.3 | 0.009712 | 33 | -- | -- |
| 109.92 | 0.49 | 13.1 | -0.405 | -- | -- | -- | -- | -0.264 | -- | -- | -- | -- | -- |
| 53.86 | 0.343 | 13.2 | -- | 0.989 | -- | -- | -- | -0.223 | 22.7 | -- | -- | -- | -- |
| 54.26 | 0.343 | 13.2 | -- | -- | 0.737 | -- | -- | -0.224 | -- | 6.024e-08 | 28 | -- | -- |
| 114.25 | 0.499 | 13.1 | -- | -- | -- | -- | -- | -0.219 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 41.57 | wind | 3 | 14400 | < th | dose independent | rect. | 19 | 10 |
| 3 | 41.62 | wind | 3 | 14400 | > th | dose independent | rect. | 19 | 11 |
| 8 | 41.75 | wind | 1 | 43200 | < th | dose dependent | rect. | 9 | 4 |
| 18 | 41.98 | humidity | 80 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 24 | 42.03 | humidity | 70 | 14400 | > th | dose dependent | rect. | 4 | 1 |
| 29 | 42.11 | humidity | 90 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 36 | 42.18 | wind | 1 | 14400 | > th | dose dependent | rect. | 24 | 14 |
| 38 | 42.19 | humidity | 90 | 14400 | < th | dose dependent | rect. | 24 | 6 |
| 49 | 42.27 | wind | 3 | 14400 | < th | dose independent | rect. | 1 | 4 |
| 53 | 42.27 | wind | 9 | 14400 | < th | dose dependent | rect. | 24 | 14 |
| 54 | 42.28 | wind | 3 | 14400 | < th | dose independent | sin | 10 | NA |
| 56 | 42.28 | wind | 3 | 14400 | > th | dose independent | rect. | 24 | 5 |
| 59 | 42.29 | humidity | 80 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 74 | 42.32 | wind | 3 | 14400 | > th | dose independent | sin | 10 | NA |
| 88 | 42.35 | wind | 3 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 98 | 42.38 | wind | 3 | 14400 | < th | dose independent | rect. | 20 | 17 |
| 102 | 42.39 | humidity | 80 | 14400 | > th | dose independent | rect. | 4 | 3 |
| 106 | 42.39 | wind | 3 | 14400 | > th | dose independent | rect. | 20 | 17 |
| 108 | 42.40 | humidity | 80 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 133 | 42.42 | humidity | 80 | 14400 | > th | dose independent | rect. | 23 | 8 |
| 147 | 42.43 | wind | 9 | 14400 | < th | dose independent | rect. | 18 | 20 |
| 166 | 42.46 | wind | 1 | 43200 | > th | dose independent | rect. | 9 | 4 |
| 167 | 42.46 | humidity | 80 | 14400 | < th | dose independent | rect. | 22 | 9 |
| 176 | 42.47 | wind | 5 | 14400 | < th | dose dependent | rect. | 19 | 11 |
| 189 | 42.48 | wind | 1 | 14400 | > th | dose dependent | sin | 6 | NA |
| 203 | 42.51 | wind | 3 | 14400 | < th | dose independent | rect. | 4 | 1 |
| 208 | 42.51 | wind | 9 | 14400 | < th | dose independent | rect. | 20 | 18 |
| 242 | 42.55 | wind | 1 | 43200 | < th | dose independent | rect. | 9 | 4 |
| 250 | 42.56 | wind | 3 | 14400 | > th | dose independent | rect. | 24 | 13 |
| 251 | 42.56 | wind | 9 | 14400 | < th | dose dependent | sin | 6 | NA |
| 272 | 42.58 | wind | 5 | 14400 | < th | dose dependent | rect. | 3 | 3 |
| 281 | 42.59 | wind | 3 | 14400 | < th | dose independent | rect. | 24 | 13 |
| 341 | 42.65 | wind | 3 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 342 | 42.65 | humidity | 80 | 14400 | < th | dose independent | rect. | 22 | 5 |
| 350 | 42.66 | humidity | 80 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 361 | 42.66 | wind | 1 | 14400 | > th | dose dependent | rect. | 20 | 10 |
| 391 | 42.69 | humidity | 80 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 394 | 42.69 | humidity | 80 | 14400 | > th | dose independent | rect. | 23 | 4 |
| 398 | 42.69 | wind | 5 | 14400 | < th | dose dependent | rect. | 24 | 6 |
| 446 | 42.72 | wind | 9 | 14400 | > th | dose independent | rect. | 18 | 20 |
| 506 | 42.76 | wind | 5 | 43200 | < th | dose dependent | rect. | 23 | 4 |
| 511 | 42.77 | wind | 7 | 14400 | > th | dose independent | rect. | 12 | 2 |
| 539 | 42.79 | wind | 1 | 14400 | > th | dose dependent | rect. | 3 | 3 |
| 611 | 42.83 | wind | 1 | 14400 | > th | dose dependent | rect. | 24 | 6 |
| 618 | 42.84 | wind | 7 | 14400 | < th | dose independent | rect. | 12 | 2 |
| 626 | 42.84 | wind | 9 | 14400 | > th | dose dependent | rect. | 18 | 20 |
| 628 | 42.85 | wind | 3 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 718 | 42.90 | temperature | 20 | 90 | > th | dose dependent | rect. | 22 | 14 |
| 812 | 42.96 | wind | 3 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 829 | 42.97 | wind | 3 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 859 | 42.98 | wind | 7 | 14400 | > th | dose dependent | rect. | 4 | 10 |
| 886 | 43.00 | wind | 7 | 14400 | > th | dose dependent | sin | 3 | NA |
| 894 | 43.00 | wind | 7 | 14400 | > th | dose dependent | rect. | 20 | 18 |