Os09g0518800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os09g0518800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 40 | 0.297 | 9.66 | -0.657 | 0.432 | -0.504 | 0.0416 | -1.09 | -0.173 | 23.3 | 23.1 | 15 | -- | -- |
| 41.35 | 0.302 | 9.68 | -0.787 | 0.422 | -0.335 | -0.239 | -- | -0.21 | 23.4 | 24.79 | 4 | -- | -- |
| 40.01 | 0.295 | 9.67 | -0.661 | 0.432 | -0.499 | -- | -1.05 | -0.174 | 23.3 | 23.1 | 14 | -- | -- |
| 41.59 | 0.3 | 9.68 | -0.777 | 0.422 | -0.334 | -- | -- | -0.208 | 23.3 | 24.8 | 5 | -- | -- |
| 50.46 | 0.331 | 9.65 | -0.607 | -- | -0.27 | -- | -1.03 | -0.151 | -- | 23.09 | 169 | -- | -- |
| 43.02 | 0.307 | 9.67 | -0.708 | 0.365 | -- | -0.227 | -- | -0.146 | 23.1 | -- | -- | -- | -- |
| 43.23 | 0.308 | 9.67 | -0.699 | 0.367 | -- | -- | -- | -0.145 | 23 | -- | -- | -- | -- |
| 49.65 | 0.328 | 9.67 | -0.788 | -- | -0.345 | -- | -- | -0.212 | -- | 29.6 | 813 | -- | -- |
| 46.46 | 0.317 | 9.62 | -- | 0.384 | 0.605 | -- | -- | 0.059 | 22.8 | 21.2 | 33938 | -- | -- |
| 51.62 | 0.336 | 9.66 | -0.691 | -- | -- | -- | -- | -0.143 | -- | -- | -- | -- | -- |
| 56.11 | 0.35 | 9.65 | -- | 0.361 | -- | -- | -- | -0.0675 | 22.9 | -- | -- | -- | -- |
| 54.64 | 0.344 | 9.61 | -- | -- | 0.509 | -- | -- | 0.0585 | -- | 22.3 | 47520 | -- | -- |
| 64.2 | 0.374 | 9.64 | -- | -- | -- | -- | -- | -0.0659 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 38.56 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 17 | 10 |
| 2 | 38.62 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 19 | 9 |
| 5 | 38.83 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 16 | 10 |
| 8 | 38.86 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 16 | 11 |
| 9 | 38.87 | temperature | 20.0 | 90 | > th | dose independent | rect. | 18 | 10 |
| 12 | 38.89 | temperature | 25.0 | 10 | < th | dose dependent | sin | 14 | NA |
| 127 | 39.27 | radiation | 30.0 | 10 | < th | dose independent | rect. | 23 | 13 |
| 170 | 39.36 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 10 | 16 |
| 296 | 39.65 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 6 | 20 |
| 297 | 39.66 | temperature | 20.0 | 30 | > th | dose independent | rect. | 9 | 20 |
| 308 | 39.68 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 21 | 6 |
| 326 | 39.73 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 23 | 10 |
| 330 | 39.73 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 23 | 10 |
| 349 | 39.77 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 21 | 3 |
| 410 | 39.85 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 23 | 1 |
| 428 | 39.88 | wind | 7.0 | 30 | < th | dose independent | rect. | 23 | 10 |
| 447 | 39.91 | temperature | 20.0 | 30 | < th | dose independent | rect. | 17 | 9 |
| 464 | 39.93 | temperature | 20.0 | 30 | < th | dose independent | sin | 14 | NA |
| 465 | 39.93 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 24 | 10 |
| 468 | 39.93 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 24 | 10 |
| 469 | 39.93 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 10 | 14 |
| 482 | 39.94 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 9 | 14 |
| 486 | 39.94 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 9 | 14 |
| 495 | 39.95 | temperature | 10.0 | 30 | > th | dose independent | rect. | 23 | 10 |
| 496 | 39.95 | temperature | 30.0 | 30 | < th | dose independent | rect. | 23 | 10 |
| 497 | 39.95 | humidity | 50.0 | 30 | > th | dose independent | rect. | 23 | 10 |
| 499 | 39.95 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 23 | 10 |
| 501 | 39.95 | temperature | 10.0 | 30 | > th | dose independent | rect. | 9 | 14 |
| 503 | 39.95 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 9 | 14 |
| 513 | 39.96 | radiation | 40.0 | 30 | < th | dose independent | rect. | 23 | 10 |
| 529 | 39.97 | temperature | 20.0 | 30 | > th | dose independent | sin | 14 | NA |
| 530 | 39.97 | temperature | 20.0 | 30 | < th | dose independent | rect. | 19 | 7 |
| 568 | 39.99 | wind | 1.0 | 30 | > th | dose independent | rect. | 9 | 14 |
| 586 | 40.00 | temperature | 25.0 | 720 | > th | dose independent | rect. | 16 | 4 |
| 621 | 40.01 | temperature | 20.0 | 30 | < th | dose independent | rect. | 13 | 13 |
| 672 | 40.03 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 23 | 10 |
| 739 | 40.07 | wind | 9.0 | 30 | < th | dose independent | rect. | 9 | 14 |
| 777 | 40.09 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 9 | 14 |
| 869 | 40.13 | temperature | 10.0 | 90 | > th | dose dependent | sin | 12 | NA |
| 917 | 40.16 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 24 | 1 |
| 993 | 40.20 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 16 | 11 |