Os09g0518700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Inositol 1, 3, 4-trisphosphate 56-kinase family protein.
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Os09g0518700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Inositol 1, 3, 4-trisphosphate 56-kinase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 23.09 | 0.226 | 10.7 | -0.17 | 0.14 | -0.564 | -0.336 | -1.13 | 0.225 | 15.6 | 26.12 | 274 | -- | -- |
| 23.29 | 0.225 | 10.6 | -0.0507 | 0.142 | -0.668 | -0.443 | -- | 0.249 | 15.7 | 26.4 | 277 | -- | -- |
| 23.4 | 0.225 | 10.7 | -0.19 | 0.138 | -0.565 | -- | -1.34 | 0.215 | 15.5 | 26.2 | 272 | -- | -- |
| 23.9 | 0.228 | 10.6 | -0.0537 | 0.155 | -0.701 | -- | -- | 0.244 | 15.7 | 26.44 | 276 | -- | -- |
| 24.07 | 0.229 | 10.7 | -0.243 | -- | -0.409 | -- | -1.75 | 0.195 | -- | 26.28 | 279 | -- | -- |
| 30.81 | 0.26 | 10.6 | -0.157 | 0.129 | -- | 0.784 | -- | 0.231 | 5.17 | -- | -- | -- | -- |
| 32.24 | 0.266 | 10.6 | -0.156 | 0.143 | -- | -- | -- | 0.227 | 6.37 | -- | -- | -- | -- |
| 24.72 | 0.232 | 10.6 | -0.0792 | -- | -0.594 | -- | -- | 0.225 | -- | 27.18 | 314 | -- | -- |
| 23.97 | 0.228 | 10.6 | -- | 0.162 | -0.715 | -- | -- | 0.251 | 15.8 | 26.4 | 276 | -- | -- |
| 33.3 | 0.27 | 10.6 | -0.152 | -- | -- | -- | -- | 0.23 | -- | -- | -- | -- | -- |
| 32.88 | 0.268 | 10.6 | -- | 0.141 | -- | -- | -- | 0.245 | 6.43 | -- | -- | -- | -- |
| 24.88 | 0.232 | 10.6 | -- | -- | -0.603 | -- | -- | 0.236 | -- | 27.12 | 314 | -- | -- |
| 33.91 | 0.272 | 10.6 | -- | -- | -- | -- | -- | 0.247 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 21.11 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 22 |
| 3 | 21.18 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 14 |
| 8 | 21.24 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 6 |
| 9 | 21.24 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 8 | 11 |
| 10 | 21.25 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 10 | 9 |
| 16 | 21.29 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 6 | 21 |
| 17 | 21.30 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 2 |
| 18 | 21.30 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 2 |
| 22 | 21.31 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 13 |
| 23 | 21.31 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 8 | 19 |
| 28 | 21.34 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 29 | 21.34 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 6 | 12 |
| 30 | 21.34 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 15 | 3 |
| 31 | 21.34 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 10 |
| 34 | 21.34 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 6 | 12 |
| 35 | 21.34 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 17 |
| 36 | 21.34 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 10 | 17 |
| 40 | 21.35 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 6 | 12 |
| 41 | 21.35 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 4 |
| 54 | 21.37 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 8 | 14 |
| 73 | 21.39 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 18 | NA |
| 75 | 21.39 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 8 |
| 77 | 21.39 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 10 | 12 |
| 120 | 21.45 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 8 | 10 |
| 121 | 21.45 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 8 | 10 |
| 127 | 21.45 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 8 | 10 |
| 164 | 21.56 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 20 |
| 166 | 21.57 | humidity | 60.0 | 4320 | < th | dose independent | rect. | 12 | 1 |
| 171 | 21.59 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 12 | 1 |
| 180 | 21.61 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 4 |
| 182 | 21.61 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 4 |
| 187 | 21.62 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 6 | 16 |
| 188 | 21.62 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 17 |
| 192 | 21.62 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 6 | 16 |
| 200 | 21.64 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 4 |
| 206 | 21.64 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 23 |
| 254 | 21.70 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 8 | 14 |
| 255 | 21.70 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 8 | 14 |
| 258 | 21.70 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 8 | 14 |
| 289 | 21.73 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 8 | 23 |
| 290 | 21.74 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 16 | 6 |
| 295 | 21.74 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 16 | 6 |
| 305 | 21.75 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 8 |
| 307 | 21.75 | precipitation | 0.1 | 14400 | > th | dose dependent | no | NA | NA |
| 308 | 21.75 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 8 |
| 318 | 21.76 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 16 | 6 |
| 325 | 21.77 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 8 |
| 402 | 21.85 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 22 | NA |
| 411 | 21.86 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 21 | NA |
| 417 | 21.86 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 21 | NA |
| 558 | 22.01 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 681 | 22.21 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 699 | 22.25 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 721 | 22.32 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 20 | 22 |
| 722 | 22.32 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 20 | 22 |
| 723 | 22.32 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 20 | 22 |
| 779 | 22.44 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 17 | 21 |
| 794 | 22.48 | radiation | 20.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 829 | 22.53 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 8 | 3 |
| 833 | 22.54 | wind | 9.0 | 14400 | < th | dose independent | rect. | 19 | 16 |
| 834 | 22.54 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 838 | 22.56 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 849 | 22.56 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 23 | 15 |
| 855 | 22.57 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 8 | 5 |
| 866 | 22.57 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 18 |
| 874 | 22.59 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 18 |
| 891 | 22.61 | wind | 9.0 | 43200 | > th | dose independent | rect. | 17 | 21 |
| 895 | 22.62 | wind | 9.0 | 43200 | < th | dose independent | rect. | 17 | 21 |
| 899 | 22.63 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 16 | 21 |
| 901 | 22.63 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 22 |
| 905 | 22.63 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 22 |
| 923 | 22.65 | humidity | 70.0 | 4320 | < th | dose dependent | rect. | 15 | 2 |
| 964 | 22.69 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 965 | 22.69 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 981 | 22.69 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 2 |
| 990 | 22.71 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 994 | 22.71 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 17 | 21 |