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Os09g0518500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Ankyrin repeat containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.8 (0.0117) R2 : 0.663
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.876 (0.0293) R2dC : 0.663 R2C : 0.659
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0518 (0.0246) R2dN8 : 0.00425 R2N8 : -0.000185
σ : 0.22
deviance : 22.16
__
_____
C
peak time of C : 8.68
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
19.13 0.206 11.8 0.167 0.875 -0.18 -0.377 -0.986 0.0879 8.67 994.4 10993 -- --
20.4 0.21 11.8 0.0258 0.868 -0.212 -0.38 -- 0.0511 8.65 998.9 11464 -- --
19.6 0.206 11.8 0.151 0.875 -0.184 -- -0.967 0.0877 8.71 994.7 10929 -- --
20.69 0.212 11.8 -0.0233 0.883 -0.267 -- -- 0.0481 8.67 996.6 11423 -- --
62.83 0.369 11.8 0.129 -- -0.215 -- -0.88 0.091 -- 994.5 11383 -- --
21.68 0.218 11.8 0.0434 0.875 -- -0.371 -- 0.0552 8.65 -- -- -- --
22.13 0.22 11.8 0.0317 0.876 -- -- -- 0.0553 8.68 -- -- -- --
63.71 0.372 11.8 -0.0319 -- -0.297 -- -- 0.0608 -- 994.5 11440 -- --
20.69 0.212 11.8 -- 0.874 -0.267 -- -- 0.0591 8.69 996.2 11414 -- --
65.43 0.378 11.8 0.0337 -- -- -- -- 0.0627 -- -- -- -- --
22.16 0.22 11.8 -- 0.876 -- -- -- 0.0518 8.68 -- -- -- --
63.73 0.372 11.8 -- -- -0.288 -- -- 0.0643 -- 994.5 11442 -- --
65.46 0.378 11.8 -- -- -- -- -- 0.059 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 18.26 humidity 90.0 30 < th dose independent rect. 20 18
7 18.48 atmosphere 1000.0 270 > th dose independent rect. 23 8
10 18.54 wind 1.0 43200 < th dose dependent rect. 2 3
11 18.58 radiation 10.0 4320 < th dose independent rect. 10 1
14 18.64 radiation 10.0 14400 < th dose dependent rect. 13 1
18 18.70 atmosphere 1000.0 270 > th dose independent rect. 23 19
20 18.73 radiation 10.0 4320 > th dose independent rect. 10 1
26 18.79 humidity 80.0 270 > th dose independent rect. 23 9
27 18.80 wind 1.0 43200 < th dose independent rect. 2 3
29 18.80 atmosphere 995.0 10 > th dose dependent rect. 13 7
33 18.84 radiation 20.0 10 < th dose dependent rect. 23 21
34 18.85 radiation 10.0 14400 < th dose independent rect. 13 1
38 18.87 wind 1.0 43200 > th dose independent rect. 2 3
42 18.90 atmosphere 1000.0 30 > th dose independent rect. 1 19
43 18.90 radiation 10.0 14400 < th dose dependent rect. 10 4
44 18.91 radiation 10.0 14400 < th dose independent rect. 10 4
46 18.91 humidity 60.0 270 > th dose dependent rect. 22 10
48 18.92 humidity 90.0 10 < th dose independent rect. 20 8
51 18.93 radiation 10.0 14400 > th dose independent rect. 10 4
56 18.94 humidity 90.0 10 < th dose independent rect. 20 6
57 18.94 precipitation 0.1 30 < th dose independent rect. 13 7
58 18.94 temperature 10.0 30 > th dose dependent rect. 20 5
59 18.94 precipitation 0.1 30 < th dose dependent rect. 13 7
61 18.94 radiation 20.0 10 < th dose dependent rect. 21 23
63 18.95 atmosphere 1000.0 90 > th dose independent rect. 1 8
69 18.95 radiation 20.0 10 < th dose dependent rect. 1 19
70 18.96 radiation 10.0 14400 > th dose independent rect. 13 1
77 18.97 atmosphere 995.0 10 > th dose independent rect. 13 7
79 18.97 radiation 40.0 10 < th dose independent rect. 13 7
86 18.98 atmosphere 1000.0 270 > th dose independent rect. 12 19
119 19.04 precipitation 0.1 30 < th dose independent rect. 20 17
123 19.04 precipitation 0.1 30 < th dose dependent rect. 20 17
125 19.05 wind 1.0 30 > th dose independent rect. 13 7
136 19.06 atmosphere 995.0 43200 > th dose independent rect. 15 6
137 19.06 temperature 10.0 30 > th dose independent rect. 13 7
139 19.06 temperature 10.0 1440 > th dose independent rect. 14 7
142 19.06 atmosphere 1010.0 30 < th dose independent rect. 13 7
146 19.06 temperature 10.0 30 > th dose independent rect. 20 17
147 19.06 temperature 10.0 1440 > th dose independent rect. 21 17
150 19.06 atmosphere 995.0 30 > th dose independent rect. 20 17
151 19.06 atmosphere 995.0 1440 > th dose independent rect. 21 17
158 19.07 atmosphere 995.0 43200 < th dose independent rect. 15 4
180 19.09 humidity 50.0 30 > th dose independent rect. 20 17
182 19.09 radiation 10.0 10 < th dose dependent sin 2 NA
195 19.11 humidity 90.0 30 < th dose independent rect. 20 10
208 19.13 atmosphere 995.0 43200 > th dose independent rect. 18 3
210 19.13 wind 1.0 10 > th dose independent rect. 20 6
221 19.14 wind 9.0 10 < th dose independent rect. 20 17
229 19.15 humidity 80.0 10 > th dose independent rect. 1 8
235 19.16 radiation 40.0 14400 > th dose independent rect. 10 1
240 19.16 wind 9.0 30 < th dose independent rect. 13 7
248 19.17 humidity 90.0 30 < th dose independent rect. 20 12
251 19.17 radiation 40.0 14400 > th dose dependent rect. 10 1
255 19.18 radiation 40.0 14400 < th dose independent rect. 10 1
274 19.19 temperature 25.0 30 > th dose independent rect. 20 6
292 19.19 humidity 70.0 30 > th dose dependent rect. 1 8
305 19.21 wind 3.0 270 > th dose independent rect. 20 1
307 19.21 precipitation 0.1 1440 < th dose independent rect. 16 5
318 19.21 precipitation 0.1 1440 < th dose dependent rect. 16 5
325 19.22 radiation 10.0 10 < th dose independent rect. 1 19
327 19.22 radiation 1.0 1440 < th dose dependent rect. 21 5
348 19.23 humidity 90.0 30 < th dose dependent rect. 20 12
350 19.24 atmosphere 995.0 43200 > th dose independent rect. 16 1
358 19.24 atmosphere 1000.0 30 > th dose independent rect. 1 10
367 19.24 radiation 20.0 10 < th dose dependent rect. 13 20
370 19.25 wind 5.0 10 < th dose independent rect. 20 6
385 19.26 radiation 10.0 10 < th dose independent rect. 23 21
406 19.27 radiation 20.0 10 < th dose dependent rect. 23 23
408 19.28 wind 5.0 720 < th dose independent rect. 13 5
418 19.28 radiation 30.0 43200 < th dose dependent rect. 21 5
424 19.29 atmosphere 995.0 43200 < th dose independent rect. 16 1
441 19.29 atmosphere 995.0 43200 < th dose dependent rect. 16 1
466 19.30 precipitation 0.1 30 < th dose independent rect. 2 18
480 19.30 precipitation 0.1 30 < th dose dependent rect. 2 18
500 19.31 temperature 10.0 270 > th dose dependent rect. 20 1
513 19.32 temperature 15.0 10 > th dose independent rect. 20 6
521 19.32 radiation 40.0 10 < th dose dependent rect. 13 7
524 19.32 temperature 10.0 30 > th dose dependent rect. 1 19
530 19.33 wind 9.0 10 < th dose independent rect. 20 6
532 19.33 temperature 30.0 10 < th dose independent rect. 20 6
533 19.33 humidity 50.0 10 > th dose independent rect. 20 6
536 19.33 atmosphere 995.0 10 > th dose independent rect. 20 6
537 19.33 radiation 1.0 10 < th dose independent rect. 20 6
544 19.33 radiation 10.0 14400 > th dose independent rect. 6 8
550 19.33 temperature 10.0 10 > th dose independent rect. 2 18
553 19.33 atmosphere 1015.0 10 < th dose independent rect. 2 18
555 19.33 wind 3.0 14400 > th dose dependent rect. 15 1
557 19.33 radiation 1.0 10 < th dose dependent rect. 20 6
563 19.33 atmosphere 995.0 270 > th dose dependent rect. 23 8
571 19.34 wind 1.0 270 > th dose independent rect. 17 8
588 19.34 humidity 80.0 4320 > th dose dependent rect. 13 1
589 19.34 atmosphere 995.0 4320 > th dose dependent rect. 4 1
597 19.35 precipitation 0.1 10 < th dose independent rect. 20 6
610 19.35 atmosphere 995.0 30 > th dose dependent rect. 20 5
611 19.35 precipitation 0.1 10 < th dose dependent rect. 20 6
612 19.35 radiation 20.0 270 < th dose dependent rect. 23 8
657 19.36 radiation 30.0 10 < th dose dependent rect. 1 8
660 19.37 wind 5.0 14400 < th dose independent rect. 15 1
679 19.37 humidity 80.0 90 > th dose independent rect. 1 7
688 19.37 humidity 50.0 270 > th dose independent rect. 7 16
744 19.38 temperature 10.0 1440 > th dose independent rect. 21 5
747 19.38 temperature 30.0 1440 < th dose independent rect. 21 5
751 19.38 humidity 50.0 1440 > th dose independent rect. 21 5
757 19.38 atmosphere 995.0 1440 > th dose independent rect. 21 5
758 19.38 radiation 1.0 1440 < th dose independent rect. 21 5
780 19.38 wind 1.0 270 > th dose independent rect. 7 16
781 19.38 temperature 10.0 1440 > th dose independent rect. 2 19
820 19.39 wind 3.0 14400 < th dose independent rect. 13 1
851 19.39 atmosphere 995.0 4320 > th dose dependent sin 2 NA
856 19.39 atmosphere 995.0 4320 > th dose dependent rect. 10 1
858 19.39 atmosphere 1015.0 4320 < th dose dependent rect. 4 1
859 19.39 atmosphere 1015.0 4320 < th dose dependent rect. 14 1
896 19.40 wind 1.0 270 > th dose independent rect. 18 5
936 19.40 temperature 30.0 30 < th dose independent rect. 13 7
941 19.40 radiation 10.0 270 < th dose independent rect. 23 8
951 19.40 atmosphere 995.0 4320 > th dose dependent rect. 14 1
958 19.40 atmosphere 995.0 4320 > th dose dependent rect. 10 5
968 19.40 temperature 25.0 30 > th dose dependent rect. 20 7