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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os09g0518400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : UDP-glucuronosyl/UDP-glucosyltransferase family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.98 (0.03) R2 : 0.00216
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0628 (0.0632) R2dN8 : 0.00279 R2N8 : 0.00216
σ : 0.565
deviance : 146.57
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
117.64 0.51 2.98 -0.21 0.295 -1.51 -0.873 4.86 0.0258 3.86 70 1442 21.9 9
118.77 0.508 2.98 -0.178 0.326 -3.51 -0.178 -- 0.0321 4.04 69 1440 21.9 9.08
120.14 0.51 2.99 -0.199 0.16 -1.46 -- 4.66 0.0585 4.8 69 1441 21.8 10.2
118.84 0.508 2.98 -0.166 0.333 -3.54 -- -- 0.0344 3.88 69.13 1440 21.9 9.08
121.08 0.513 2.98 -0.209 -- -1.58 -- 4.18 0.0583 -- 70 1438 21.8 10.2
140.36 0.555 2.98 -0.278 0.205 -- -0.817 -- 0.0254 7.26 -- -- -- --
142.15 0.558 2.98 -0.295 0.203 -- -- -- 0.0271 7.33 -- -- -- --
121.06 0.512 2.98 -0.168 -- -3.45 -- -- 0.0635 -- 69.15 1439 21.8 9.54
119.62 0.509 2.98 -- 0.334 -3.62 -- -- 0.0492 3.8 69.12 1440 21.9 9.07
144.33 0.561 2.99 -0.291 -- -- -- -- 0.0305 -- -- -- -- --
144.44 0.562 2.97 -- 0.2 -- -- -- 0.0599 7.43 -- -- -- --
121.79 0.514 2.97 -- -- -3.53 -- -- 0.0825 -- 70.2 1439 22.7 8.25
146.57 0.565 2.98 -- -- -- -- -- 0.0628 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 118.55 humidity 70 1440 > th dose independent rect. 22 9
5 119.15 humidity 70 1440 > th dose independent rect. 5 2
7 119.20 radiation 30 1440 < th dose independent rect. 22 9
9 119.37 humidity 80 1440 < th dose independent rect. 6 1
14 119.41 humidity 70 90 < th dose dependent rect. 19 14
16 119.43 humidity 80 1440 < th dose dependent rect. 6 1
44 119.47 humidity 80 270 < th dose dependent rect. 6 1
54 119.50 radiation 20 270 > th dose dependent rect. 6 1
167 119.67 radiation 20 270 > th dose independent rect. 6 1
297 121.08 humidity 70 90 < th dose independent rect. 19 14
357 122.78 radiation 30 1440 < th dose independent rect. 6 1
399 123.91 radiation 40 10 < th dose independent sin 11 NA
438 124.55 radiation 10 30 > th dose independent rect. 6 2
451 124.55 humidity 70 10 < th dose dependent rect. 7 3
533 125.67 humidity 80 10 < th dose dependent sin 10 NA
606 126.08 radiation 30 1440 < th dose independent rect. 17 14
610 126.11 radiation 20 10 > th dose dependent sin 11 NA
626 126.16 humidity 70 30 < th dose independent sin 10 NA
715 126.37 humidity 70 10 < th dose independent rect. 7 1
777 126.37 humidity 70 10 < th dose dependent rect. 7 1
780 126.37 radiation 30 10 > th dose dependent rect. 7 1